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author Petar Petrov <slackalaxy@gmail.com>2022-09-04 14:40:01 +0100
committer Dave Woodfall <dave@slackbuilds.org>2022-09-04 14:40:01 +0100
commita92f127be2934ca3eabe85f3c565848424c67af7 (patch)
tree0ec56bf752908fedf8f12595b7aa69bedea3ed1c
parent08e0e1dd1b453f5b299e502cd876a70608db3339 (diff)
downloadslackbuilds-a92f127be2934ca3eabe85f3c565848424c67af7.tar.gz
slackbuilds-a92f127be2934ca3eabe85f3c565848424c67af7.tar.xz
academic/ncbi-blast+: Updated for version 2.13.0.
Signed-off-by: Dave Woodfall <dave@slackbuilds.org>
-rw-r--r--academic/ncbi-blast+/ncbi-blast+.SlackBuild8
-rw-r--r--academic/ncbi-blast+/ncbi-blast+.info6
2 files changed, 10 insertions, 4 deletions
diff --git a/academic/ncbi-blast+/ncbi-blast+.SlackBuild b/academic/ncbi-blast+/ncbi-blast+.SlackBuild
index f71064c95b..a46ad4a0fe 100644
--- a/academic/ncbi-blast+/ncbi-blast+.SlackBuild
+++ b/academic/ncbi-blast+/ncbi-blast+.SlackBuild
@@ -27,7 +27,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=ncbi-blast+
-VERSION=${VERSION:-2.11.0}
+VERSION=${VERSION:-2.13.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
@@ -121,6 +121,12 @@ make prefix=$PKG/usr install
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
+# fix a few permissions
+chmod 0644 $PKG/usr/include/ncbi-tools++/algo/dustmask/*.tex
+chmod 0644 $PKG/usr/include/ncbi-tools++/objects/gbproj/*.{hpp,h}
+chmod 0644 $PKG/usr/include/ncbi-tools++/objects/taxon3/*.hpp
+chmod 0644 $PKG/usr/include/ncbi-tools++/objtools/edit/*.hpp
+
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
diff --git a/academic/ncbi-blast+/ncbi-blast+.info b/academic/ncbi-blast+/ncbi-blast+.info
index b688877e0b..b42442f09a 100644
--- a/academic/ncbi-blast+/ncbi-blast+.info
+++ b/academic/ncbi-blast+/ncbi-blast+.info
@@ -1,8 +1,8 @@
PRGNAM="ncbi-blast+"
-VERSION="2.11.0"
+VERSION="2.13.0"
HOMEPAGE="https://blast.ncbi.nlm.nih.gov/"
-DOWNLOAD="ftp://ftp.ncbi.nih.gov/blast/executables/blast+/2.11.0/ncbi-blast-2.11.0+-src.tar.gz"
-MD5SUM="13f93eea6741af2bbcc07f59941dc77b"
+DOWNLOAD="ftp://ftp.ncbi.nih.gov/blast/executables/blast+/2.13.0/ncbi-blast-2.13.0+-src.tar.gz"
+MD5SUM="0542f0e7b148d02db0854965e78e36c4"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""