diff options
| author |   Petar Petrov <slackalaxy@gmail.com> | 2021-05-18 16:17:38 +0300 |
|---|---|---|
| committer |   Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2021-05-18 23:40:09 +0700 |
| commit | 5439426bc8a8f45bf5f1cff07cfc888bd16ff4d3 (patch) | |
| tree | a48ed427a04b316aa34ed4f46ec71b268b6c88cd /academic/fiji | |
| parent | e39996cfac62b13c392c397b6fd8ced7d4ebff43 (diff) | |
| download | slackbuilds-5439426bc8a8f45bf5f1cff07cfc888bd16ff4d3.tar.gz slackbuilds-5439426bc8a8f45bf5f1cff07cfc888bd16ff4d3.tar.xz | |
academic/fiji: update for version 20201104_1356
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/fiji')
| -rw-r--r-- | academic/fiji/README | 2 | ||||
| -rw-r--r-- | academic/fiji/fiji.SlackBuild | 21 | ||||
| -rw-r--r-- | academic/fiji/fiji.info | 12 |
3 files changed, 24 insertions, 11 deletions
diff --git a/academic/fiji/README b/academic/fiji/README index 873045e097..1b51100f6a 100644 --- a/academic/fiji/README +++ b/academic/fiji/README @@ -32,6 +32,8 @@ Fiji is Just ImageJ, with extras. It is a distribution of ImageJ with many plugins useful for scientific image analysis in fields such as life sciences. It is actively maintained, with updates released often. +NOTE: This comes with its own Java environment. + Citing Schindelin, J.; Arganda-Carreras, I. & Frise, E. et al. (2012) "Fiji: an open-source platform for biological-image analysis" diff --git a/academic/fiji/fiji.SlackBuild b/academic/fiji/fiji.SlackBuild index 68c84ec4a6..94db198e80 100644 --- a/academic/fiji/fiji.SlackBuild +++ b/academic/fiji/fiji.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for fiji -# Copyright 2018-2020 Petar Petrov slackalaxy@gmail.com +# Copyright 2018-2021 Petar Petrov slackalaxy@gmail.com # All rights reserved. # # Redistribution and use of this script, with or without modification, is @@ -45,16 +45,23 @@ OUTPUT=${OUTPUT:-/tmp} set -e # Stop if arch is not supported -if [ "$ARCH" != "x86_64" ]; then +if [ "$ARCH" != "i386" ] && [ "$ARCH" != "x86_64" ]; then printf "\n\n$ARCH is not supported... \n" exit 1 fi +# Determine suffix +if [ "$ARCH" = "x86_64" ]; then + SUFFIX=linux64 +else + SUFFIX=inux32 +fi + rm -rf $PKG mkdir -p $TMP $PKG $OUTPUT cd $TMP rm -rf $DIRNAM -tar xvf $CWD/${PRGNAM}-nojre.tar.gz +tar xvf $CWD/${PRGNAM}-$SUFFIX.tar.gz cd $DIRNAM chown -R root:root . find -L . \ @@ -64,7 +71,7 @@ find -L . \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; # Rename the binary we need -mv ImageJ-linux64 $PRGNAM +mv ImageJ-$SUFFIX $PRGNAM # We will put here two tools, so they are not run at startup. mkdir -p unused @@ -85,15 +92,19 @@ cd .. # Update plugins, so that the latest are included in the package. This # will download stuff during the package creation, something that is -# against the policy of SlackBuilds.org. However, it is your system, +# against the policy of SlackBuilds.org. However, it is _your_ system, # so if you _really_ want this, uncomment the line below. # ./$PRGNAM --update list-local-only # Copy the folders, db.xml and the renamed binary to /opt mkdir -p $PKG/opt/$PRGNAM cp -a \ + Contents \ images \ jars \ + java \ + lib \ + licenses \ luts \ macros \ plugins \ diff --git a/academic/fiji/fiji.info b/academic/fiji/fiji.info index 20c501e557..9e3928ff4b 100644 --- a/academic/fiji/fiji.info +++ b/academic/fiji/fiji.info @@ -1,10 +1,10 @@ PRGNAM="fiji" -VERSION="20200902_2101" +VERSION="20201104_1356" HOMEPAGE="https://fiji.sc/" -DOWNLOAD="UNSUPPORTED" -MD5SUM="" -DOWNLOAD_x86_64="https://downloads.imagej.net/fiji/archive/20200902-2101/fiji-nojre.tar.gz" -MD5SUM_x86_64="79c19275017206c662c4381dd43f7dc2" -REQUIRES="jdk" +DOWNLOAD="https://downloads.imagej.net/fiji/archive/20201104-1356/fiji-linux32.tar.gz" +MD5SUM="bff409ed4b683d67e3b3ac0d38423f0d" +DOWNLOAD_x86_64="https://downloads.imagej.net/fiji/archive/20201104-1356/fiji-linux64.tar.gz" +MD5SUM_x86_64="7141a774a0c759f6fea0875a6cbf58b9" +REQUIRES="" MAINTAINER="Petar Petrov" EMAIL="slackalaxy@gmail.com" |