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author Petar Petrov <slackalaxy@gmail.com>2016-11-26 21:29:06 +0000
committer Willy Sudiarto Raharjo <willysr@slackbuilds.org>2016-12-03 07:17:45 +0700
commitf91764fcf23e5b9453f9aa778f78cdde7cd4ef1d (patch)
tree806d1e005701bbeb138d4b196b047ecb9a902206 /academic
parentf2afa5c89ce054eb098eceaeec964e5e1f56de2f (diff)
downloadslackbuilds-f91764fcf23e5b9453f9aa778f78cdde7cd4ef1d.tar.gz
slackbuilds-f91764fcf23e5b9453f9aa778f78cdde7cd4ef1d.tar.xz
academic/clustalo: Updated for version 1.2.3.
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
Diffstat (limited to 'academic')
-rw-r--r--academic/clustalo/README2
-rw-r--r--academic/clustalo/clustalo.SlackBuild8
-rw-r--r--academic/clustalo/clustalo.info6
-rw-r--r--academic/clustalo/slack-desc2
4 files changed, 9 insertions, 9 deletions
diff --git a/academic/clustalo/README b/academic/clustalo/README
index 62132aeb8a..f7a9064157 100644
--- a/academic/clustalo/README
+++ b/academic/clustalo/README
@@ -13,7 +13,7 @@ independent programs provide an easy to use GUI:
If you like Clustal-Omega please cite:
Sievers F, Wilm A, Dineen D, Gibson TJ, Karplus K, Li W, Lopez R,
-McWilliam H, Remmert M, Soding J, Thompson JD, Higgins DG.
+McWilliam H, Remmert M, Söding J, Thompson JD, Higgins DG.
Fast, scalable generation of high-quality protein multiple sequence
alignments using Clustal Omega. Mol Syst Biol. 2011 Oct 11;7:539. doi:
10.1038/msb.2011.75. PMID: 21988835.
diff --git a/academic/clustalo/clustalo.SlackBuild b/academic/clustalo/clustalo.SlackBuild
index 8990c6c63e..99f468e8e9 100644
--- a/academic/clustalo/clustalo.SlackBuild
+++ b/academic/clustalo/clustalo.SlackBuild
@@ -23,7 +23,7 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
PRGNAM=clustalo
-VERSION=${VERSION:-1.2.1}
+VERSION=${VERSION:-1.2.3}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
@@ -31,7 +31,7 @@ SRCNAM=clustal-omega
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
@@ -42,8 +42,8 @@ TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
diff --git a/academic/clustalo/clustalo.info b/academic/clustalo/clustalo.info
index e76ec88488..b29514199a 100644
--- a/academic/clustalo/clustalo.info
+++ b/academic/clustalo/clustalo.info
@@ -1,8 +1,8 @@
PRGNAM="clustalo"
-VERSION="1.2.1"
+VERSION="1.2.3"
HOMEPAGE="http://www.clustal.org/omega/"
-DOWNLOAD="http://www.clustal.org/omega/clustal-omega-1.2.1.tar.gz"
-MD5SUM="7ea360ef0c615d3a07c872e2345df3e1"
+DOWNLOAD="http://www.clustal.org/omega/clustal-omega-1.2.3.tar.gz"
+MD5SUM="f92f6ddbc32afc8a8b3026de7f4e15d4"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="argtable"
diff --git a/academic/clustalo/slack-desc b/academic/clustalo/slack-desc
index 6f180c0cff..7d53998dda 100644
--- a/academic/clustalo/slack-desc
+++ b/academic/clustalo/slack-desc
@@ -15,5 +15,5 @@ clustalo: versions, allowing hundreds of thousands of sequences to be
clustalo: aligned in only a few hours.
clustalo:
clustalo: Home: http://www.clustal.org/omega/
-clustalo: References: /usr/doc/clustalo-1.2.1/References
+clustalo: References: /usr/doc/clustalo-1.2.3/References
clustalo: