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-rw-r--r--ChangeLog.txt7069
-rw-r--r--README1
-rw-r--r--academic/CAFS_divergence/README29
-rw-r--r--academic/FCSalyzer/FCSalyzer.SlackBuild13
-rw-r--r--academic/FCSalyzer/FCSalyzer.info6
-rw-r--r--academic/FreeFem/FreeFem.SlackBuild105
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-rw-r--r--academic/FreeFem/README13
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-rw-r--r--academic/Gridcoin-Research/Gridcoin-Research.SlackBuild16
-rw-r--r--academic/Gridcoin-Research/Gridcoin-Research.info6
-rw-r--r--academic/Gridcoin-Research/README23
-rw-r--r--academic/Gridcoin-Research/doinst.sh5
-rw-r--r--academic/HMMER/HMMER.SlackBuild11
-rw-r--r--academic/HMMER/HMMER.info8
-rw-r--r--academic/ITK/ITK.SlackBuild24
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-rw-r--r--academic/ITK/README6
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-rw-r--r--academic/Kst/README5
-rw-r--r--academic/MetaPhlAn2/MetaPhlAn2.SlackBuild10
-rw-r--r--academic/MetaPhlAn2/MetaPhlAn2.info6
-rw-r--r--academic/MetaPhlAn2/README2
-rw-r--r--academic/Mnemosyne/README3
-rw-r--r--academic/OpenFOAM/OpenFOAM.SlackBuild4
-rw-r--r--academic/OpenFOAM/OpenFOAM.info10
-rw-r--r--academic/OpenFOAM/OpenFOAM.sh2
-rw-r--r--academic/OpenFOAM/README3
-rw-r--r--academic/PhyML/PhyML.SlackBuild37
-rw-r--r--academic/PhyML/PhyML.info6
-rw-r--r--academic/PyAMG/README16
-rw-r--r--academic/R/R.SlackBuild7
-rw-r--r--academic/R/R.info8
-rw-r--r--academic/R/README2
-rw-r--r--academic/RepeatMasker/README2
-rw-r--r--academic/RepeatMasker/RepeatMasker.SlackBuild9
-rw-r--r--academic/RepeatMasker/RepeatMasker.info6
-rw-r--r--academic/STAR/STAR.SlackBuild2
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-rw-r--r--academic/TreeGraph/TreeGraph.SlackBuild6
-rw-r--r--academic/TreeGraph/TreeGraph.info6
-rw-r--r--academic/ViennaRNA/README33
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-rw-r--r--academic/ViennaRNA/slack-desc4
-rw-r--r--academic/WordNet/README17
-rw-r--r--academic/WordNet/WordNet.info4
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-rw-r--r--academic/artha/README2
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-rw-r--r--academic/bcftools/README12
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-rw-r--r--academic/cadabra2/cadabra2.info6
-rw-r--r--academic/calc/calc.info2
-rw-r--r--academic/calcoo/README9
-rw-r--r--academic/camd/camd.SlackBuild12
-rw-r--r--academic/camd/camd.info4
-rw-r--r--academic/camd/patches/autoconfiscate.diff2
-rw-r--r--academic/cap3/README11
-rw-r--r--academic/cblas/README11
-rw-r--r--academic/cblas/cblas.SlackBuild6
-rw-r--r--academic/cblas/cblas.info6
-rw-r--r--academic/cblas/patches/cmake-piecewise.diff93
-rw-r--r--academic/ccolamd/ccolamd.SlackBuild12
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-rw-r--r--academic/ccolamd/patches/autoconfiscate.diff2
-rw-r--r--academic/cdo/README7
-rw-r--r--academic/cdo/cdo.SlackBuild108
-rw-r--r--academic/cdo/cdo.info10
-rw-r--r--academic/cdo/slack-desc19
-rw-r--r--academic/chartgeany/README6
-rw-r--r--academic/chartgeany/chartgeany.SlackBuild106
-rw-r--r--academic/chartgeany/chartgeany.info10
-rw-r--r--academic/chartgeany/doinst.sh (renamed from misc/gcolor2/doinst.sh)0
-rw-r--r--academic/chartgeany/slack-desc19
-rw-r--r--academic/cholmod/README18
-rw-r--r--academic/cholmod/cholmod.SlackBuild12
-rw-r--r--academic/cholmod/cholmod.info4
-rw-r--r--academic/cholmod/patches/autoconfiscate.diff2
-rw-r--r--academic/cistrome-CEAS/cistrome-CEAS.SlackBuild10
-rw-r--r--academic/cistrome-CEAS/cistrome-CEAS.info4
-rw-r--r--academic/cistrome-MACS/cistrome-MACS.SlackBuild10
-rw-r--r--academic/cistrome-MACS/cistrome-MACS.info2
-rw-r--r--academic/clark-ugene/clark-ugene.SlackBuild5
-rw-r--r--academic/cld2/README16
-rw-r--r--academic/colamd/colamd.SlackBuild12
-rw-r--r--academic/colamd/colamd.info4
-rw-r--r--academic/colamd/patches/autoconfiscate.diff2
-rw-r--r--academic/colin/README5
-rw-r--r--academic/colin/colin.SlackBuild101
-rw-r--r--academic/colin/colin.info10
-rw-r--r--academic/colin/slack-desc19
-rw-r--r--academic/convertall/README9
-rw-r--r--academic/copasi/README6
-rw-r--r--academic/copasi/copasi.SlackBuild30
-rw-r--r--academic/copasi/copasi.info12
-rw-r--r--academic/coq/README19
-rw-r--r--academic/coq/coq.SlackBuild85
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-rw-r--r--academic/cryptominisat/cryptominisat.SlackBuild2
-rw-r--r--academic/cryptominisat/cryptominisat.info6
-rw-r--r--academic/csparse/README6
-rw-r--r--academic/csparse/csparse.SlackBuild12
-rw-r--r--academic/csparse/csparse.info4
-rw-r--r--academic/csparse/patches/autoconfiscate.diff2
-rw-r--r--academic/cvc4/README6
-rw-r--r--academic/cvc4/cvc4.SlackBuild27
-rw-r--r--academic/cvc4/cvc4.info8
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-rw-r--r--academic/cxsparse/cxsparse.SlackBuild12
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-rw-r--r--academic/dakota/README20
-rw-r--r--academic/dakota/dakota.SlackBuild4
-rw-r--r--academic/dakota/dakota.info6
-rw-r--r--academic/diamond/README12
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-rw-r--r--academic/engauge/README15
-rw-r--r--academic/eprover/eprover.SlackBuild4
-rw-r--r--academic/eprover/eprover.info6
-rw-r--r--academic/equalx/README2
-rw-r--r--academic/equalx/equalx.SlackBuild57
-rw-r--r--academic/equalx/equalx.desktop16
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-rw-r--r--academic/ess/README8
-rw-r--r--academic/evopedia_qt/evopedia_qt.info2
-rw-r--r--academic/fann/README15
-rw-r--r--academic/fastqc/fastqc.SlackBuild6
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-rw-r--r--academic/fet/fet.info6
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-rw-r--r--academic/fiji/ImageJ2.desktop2
-rw-r--r--academic/fiji/README5
-rw-r--r--academic/fiji/fiji.SlackBuild21
-rw-r--r--academic/fiji/fiji.info10
-rw-r--r--academic/fityk/README3
-rw-r--r--academic/flann/README13
-rw-r--r--academic/free42/README13
-rw-r--r--academic/freechartgeany/README15
-rw-r--r--academic/freechartgeany/freechartgeany.SlackBuild98
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-rw-r--r--academic/gcalctool/README2
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-rw-r--r--academic/gcompris-qt/README18
-rw-r--r--academic/gcompris-qt/doinst.sh9
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-rw-r--r--academic/gcompris-qt/gcompris-qt.SlackBuild103
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-rw-r--r--academic/gcompris/README10
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