diff options
Diffstat (limited to 'academic/IGV')
| -rw-r--r-- | academic/IGV/IGV.SlackBuild | 11 | ||||
| -rw-r--r-- | academic/IGV/IGV.info | 6 | ||||
| -rw-r--r-- | academic/IGV/IGV.png | bin | 0 -> 5370 bytes |
3 files changed, 11 insertions, 6 deletions
diff --git a/academic/IGV/IGV.SlackBuild b/academic/IGV/IGV.SlackBuild index 8b3532ebcb..38a9d08e7e 100644 --- a/academic/IGV/IGV.SlackBuild +++ b/academic/IGV/IGV.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for IGV -# Copyright 2020-2021 Petar Petrov slackalaxy@gmail.com +# Copyright 2020-2023 Petar Petrov slackalaxy@gmail.com # All rights reserved. # # Redistribution and use of this script, with or without modification, is @@ -25,7 +25,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=IGV -VERSION=${VERSION:-2.9.4} +VERSION=${VERSION:-2.16.2} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} @@ -71,9 +71,14 @@ find -L . \ # Place it in /opt and make a symlink later mkdir -p $PKG/opt/$PRGNAM cp -a $JDK lib igv.args igv.sh igv_hidpi.sh $PKG/opt/$PRGNAM +chmod 0755 $PKG/opt/IGV/jdk-11/lib/{jli,server}/*.so +chmod 0755 $PKG/opt/IGV/jdk-11/lib/*.so + +find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \ + | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true mkdir -p $PKG/usr/share/{applications,pixmaps} -cp IGV_64.png $PKG/usr/share/pixmaps/$PRGNAM.png +cp $CWD/$PRGNAM.png $PKG/usr/share/pixmaps cp $CWD/$PRGNAM.desktop $PKG/usr/share/applications mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION diff --git a/academic/IGV/IGV.info b/academic/IGV/IGV.info index cbfc74e093..23341260cc 100644 --- a/academic/IGV/IGV.info +++ b/academic/IGV/IGV.info @@ -1,10 +1,10 @@ PRGNAM="IGV" -VERSION="2.9.4" +VERSION="2.16.2" HOMEPAGE="http://software.broadinstitute.org/software/igv/home" DOWNLOAD="UNSUPPORTED" MD5SUM="" -DOWNLOAD_x86_64="https://data.broadinstitute.org/igv/projects/downloads/2.9/IGV_Linux_2.9.4_WithJava.zip" -MD5SUM_x86_64="bf510e5f868daf5772ce51a4ce3213ab" +DOWNLOAD_x86_64="https://data.broadinstitute.org/igv/projects/downloads/2.16/IGV_Linux_2.16.2_WithJava.zip" +MD5SUM_x86_64="19adb2bac44d46373fc021fbad3cce10" REQUIRES="" MAINTAINER="Petar Petrov" EMAIL="slackalaxy@gmail.com" diff --git a/academic/IGV/IGV.png b/academic/IGV/IGV.png Binary files differnew file mode 100644 index 0000000000..3d618f23a6 --- /dev/null +++ b/academic/IGV/IGV.png |
