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-rw-r--r--academic/CAFS_divergence/CAFS_divergence.SlackBuild18
-rw-r--r--academic/CAPS_coevolution/CAPS_coevolution.SlackBuild18
-rw-r--r--academic/CAPS_coevolution/README5
-rw-r--r--academic/Data2FCS/Data2FCS.SlackBuild18
-rw-r--r--academic/Data2FCS/Data2FCS.info2
-rw-r--r--academic/DendroPy/DendroPy.SlackBuild18
-rw-r--r--academic/EMBASSY/EMBASSY.SlackBuild30
-rw-r--r--academic/EMBOSS/EMBOSS.SlackBuild26
-rw-r--r--academic/EMBOSS/EMBOSS.info2
-rw-r--r--academic/FCSalyzer/FCSalyzer.SlackBuild29
-rw-r--r--academic/FCSalyzer/FCSalyzer.info8
-rw-r--r--academic/FreeFem/FreeFem.SlackBuild16
-rw-r--r--academic/Gblocks/Gblocks.SlackBuild30
-rw-r--r--academic/GeoGebra/GeoGebra.SlackBuild16
-rw-r--r--academic/Gridcoin-Research/Gridcoin-Research.SlackBuild20
-rw-r--r--academic/Gridcoin-Research/Gridcoin-Research.desktop9
-rw-r--r--academic/Gridcoin-Research/Gridcoin-Research.info8
-rw-r--r--academic/Gridcoin-Research/README9
-rw-r--r--academic/HMMER/HMMER.SlackBuild20
-rw-r--r--academic/HMMER/HMMER.info8
-rw-r--r--academic/IGV/IGV.SlackBuild20
-rw-r--r--academic/IGV/IGV.info6
-rw-r--r--academic/IGV/README2
-rw-r--r--academic/ITK/ITK.SlackBuild57
-rw-r--r--academic/ITK/ITK.info8
-rw-r--r--academic/Kst/Kst.SlackBuild16
-rw-r--r--academic/Kst/README1
-rw-r--r--academic/MetaPhlAn2/MetaPhlAn2.SlackBuild35
-rw-r--r--academic/MetaPhlAn2/MetaPhlAn2.info6
-rw-r--r--academic/Mnemosyne/Mnemosyne.SlackBuild16
-rw-r--r--academic/Mnemosyne/Mnemosyne.info2
-rw-r--r--academic/Mnemosyne/README3
-rw-r--r--academic/OpenFOAM/OpenFOAM.SlackBuild16
-rw-r--r--academic/PhyML/PhyML.SlackBuild18
-rw-r--r--academic/PyAMG/PyAMG.SlackBuild16
-rw-r--r--academic/QtiPlot/QtiPlot.SlackBuild16
-rw-r--r--academic/R/R.SlackBuild16
-rw-r--r--academic/R/R.info2
-rw-r--r--academic/RAxML/RAxML.SlackBuild22
-rw-r--r--academic/RepeatMasker/RepeatMasker.SlackBuild23
-rw-r--r--academic/RepeatMasker/RepeatMasker.info6
-rw-r--r--academic/STAR/STAR.SlackBuild16
-rw-r--r--academic/SU2/SU2.SlackBuild16
-rw-r--r--academic/SeqMonk/README2
-rw-r--r--academic/SeqMonk/SeqMonk.SlackBuild18
-rw-r--r--academic/Shark/Shark.SlackBuild20
-rw-r--r--academic/Shark/Shark.info6
-rw-r--r--academic/TreeGraph/TreeGraph.SlackBuild18
-rw-r--r--academic/TreeGraph/TreeGraph.info2
-rw-r--r--academic/ViennaRNA/ViennaRNA.SlackBuild16
-rw-r--r--academic/ViennaRNA/ViennaRNA.info2
-rw-r--r--academic/WEVOTE/WEVOTE.SlackBuild18
-rw-r--r--academic/WordNet/WordNet.SlackBuild16
-rw-r--r--academic/Xyce/Xyce.SlackBuild16
-rw-r--r--academic/ZeGrapher/ZeGrapher.SlackBuild16
-rw-r--r--academic/ZeGrapher/ZeGrapher.info2
-rw-r--r--academic/abella/abella.SlackBuild16
-rw-r--r--academic/abntex/abntex.SlackBuild16
-rw-r--r--academic/aenig4/aenig4.SlackBuild16
-rw-r--r--academic/aline/README1
-rw-r--r--academic/aline/aline.SlackBuild18
-rw-r--r--academic/aliview/aliview.SlackBuild20
-rw-r--r--academic/aliview/aliview.info8
-rw-r--r--academic/amd/amd.SlackBuild16
-rw-r--r--academic/amplicon/README19
-rw-r--r--academic/amplicon/amplicon.SlackBuild18
-rw-r--r--academic/amplifx/amplifx.SlackBuild18
-rw-r--r--academic/amplifx/amplifx.info2
-rw-r--r--academic/antiprism/antiprism.SlackBuild18
-rw-r--r--academic/archaeopteryx/archaeopteryx.SlackBuild18
-rw-r--r--academic/archaeopteryx/archaeopteryx.info2
-rw-r--r--academic/archaeopteryx/archaeopteryx.pngbin39248 -> 39748 bytes
-rw-r--r--academic/aris/aris.SlackBuild16
-rw-r--r--academic/arka/arka.SlackBuild40
-rw-r--r--academic/armadillo/armadillo.SlackBuild16
-rw-r--r--academic/arpack-ng/arpack-ng.SlackBuild16
-rw-r--r--academic/arpack/arpack.SlackBuild16
-rw-r--r--academic/artha/artha.SlackBuild24
-rw-r--r--academic/artha/artha.info6
-rw-r--r--academic/avl/avl.SlackBuild16
-rw-r--r--academic/avogadro/avogadro.SlackBuild16
-rw-r--r--academic/bcftools/bcftools.SlackBuild24
-rw-r--r--academic/bcftools/bcftools.info6
-rw-r--r--academic/bedGraphToBigWig/bedGraphToBigWig.SlackBuild20
-rw-r--r--academic/bedtools/bedtools.SlackBuild20
-rw-r--r--academic/bedtools/bedtools.info6
-rw-r--r--academic/biblesync/biblesync.SlackBuild16
-rw-r--r--academic/bibletime/bibletime.SlackBuild16
-rw-r--r--academic/bibletime/bibletime.info2
-rw-r--r--academic/bibus/bibus.SlackBuild16
-rw-r--r--academic/biopython/biopython.SlackBuild24
-rw-r--r--academic/biopython/biopython.info6
-rw-r--r--academic/boinc/README6
-rw-r--r--academic/boinc/boinc.SlackBuild21
-rw-r--r--academic/boinc/boinc.info10
-rw-r--r--academic/bowtie/bowtie.SlackBuild39
-rw-r--r--academic/bowtie/bowtie.info8
-rw-r--r--academic/bowtie2-legacy/bowtie2-legacy.SlackBuild16
-rw-r--r--academic/bowtie2/bowtie2.SlackBuild16
-rw-r--r--academic/bowtie2/bowtie2.info2
-rw-r--r--academic/bpp-core/bpp-core.SlackBuild18
-rw-r--r--academic/bpp-phyl-omics/bpp-phyl-omics.SlackBuild18
-rw-r--r--academic/bpp-phyl/bpp-phyl.SlackBuild18
-rw-r--r--academic/bpp-popgen/bpp-popgen.SlackBuild18
-rw-r--r--academic/bpp-seq-omics/bpp-seq-omics.SlackBuild18
-rw-r--r--academic/bpp-seq/bpp-seq.SlackBuild18
-rw-r--r--academic/bpp1.9-numcalc/bpp1.9-numcalc.SlackBuild20
-rw-r--r--academic/bpp1.9-phyl/bpp1.9-phyl.SlackBuild18
-rw-r--r--academic/bpp1.9-seq/bpp1.9-seq.SlackBuild20
-rw-r--r--academic/bpp1.9-utils/bpp1.9-utils.SlackBuild20
-rw-r--r--academic/bppsuite/bppsuite.SlackBuild18
-rw-r--r--academic/btf/btf.SlackBuild16
-rw-r--r--academic/bwa/bwa.SlackBuild22
-rw-r--r--academic/cadabra2/cadabra2.SlackBuild16
-rw-r--r--academic/cadabra2/cadabra2.info2
-rw-r--r--academic/calc/calc.SlackBuild18
-rw-r--r--academic/calc/calc.info6
-rw-r--r--academic/calcoo/calcoo.SlackBuild18
-rw-r--r--academic/camd/camd.SlackBuild16
-rw-r--r--academic/cap3/cap3.SlackBuild22
-rw-r--r--academic/cap3/cap3.info4
-rw-r--r--academic/cblas/cblas.SlackBuild20
-rw-r--r--academic/cblas/cblas.info6
-rw-r--r--academic/cblas/patches/cmake-piecewise.diff165
-rw-r--r--academic/ccolamd/ccolamd.SlackBuild16
-rw-r--r--academic/cdo/cdo.SlackBuild16
-rw-r--r--academic/celestia/celestia.SlackBuild16
-rw-r--r--academic/celestia/celestia.info2
-rw-r--r--academic/chartgeany/README4
-rw-r--r--academic/chartgeany/chartgeany.SlackBuild16
-rw-r--r--academic/chemtool/chemtool.SlackBuild18
-rw-r--r--academic/cholmod/cholmod.SlackBuild16
-rw-r--r--academic/cistrome-CEAS/cistrome-CEAS.SlackBuild18
-rw-r--r--academic/cistrome-MACS/cistrome-MACS.SlackBuild18
-rw-r--r--academic/cistrome-conductGO/cistrome-conductGO.SlackBuild18
-rw-r--r--academic/cistrome-extra/cistrome-extra.SlackBuild18
-rw-r--r--academic/cistrome-extra/cistrome-extra.info2
-rw-r--r--academic/cistrome-mdseqpos/cistrome-mdseqpos.SlackBuild18
-rw-r--r--academic/clark-ugene/clark-ugene.SlackBuild18
-rw-r--r--academic/cld2/cld2.SlackBuild16
-rw-r--r--academic/clustalo/clustalo.SlackBuild18
-rw-r--r--academic/clustalw/clustalw.SlackBuild34
-rw-r--r--academic/clustalx/clustalx.SlackBuild16
-rw-r--r--academic/colamd/colamd.SlackBuild16
-rw-r--r--academic/colin/colin.SlackBuild16
-rw-r--r--academic/colin/colin.info2
-rw-r--r--academic/convertall/convertall.SlackBuild16
-rw-r--r--academic/convertall/convertall.info2
-rw-r--r--academic/copasi/copasi.SlackBuild16
-rw-r--r--academic/coq/coq.SlackBuild16
-rw-r--r--academic/cryptominisat/cryptominisat.SlackBuild16
-rw-r--r--academic/csparse/csparse.SlackBuild16
-rw-r--r--academic/cufflinks/README2
-rw-r--r--academic/cufflinks/cufflinks.SlackBuild82
-rw-r--r--academic/cufflinks/cufflinks.info9
-rw-r--r--academic/cutadapt/cutadapt.SlackBuild18
-rw-r--r--academic/cvc4/cvc4.SlackBuild16
-rw-r--r--academic/cxsparse/cxsparse.SlackBuild16
-rw-r--r--academic/dakota/dakota.SlackBuild16
-rw-r--r--academic/datamash/datamash.SlackBuild18
-rw-r--r--academic/diamond/diamond.SlackBuild18
-rw-r--r--academic/drawtiming/drawtiming.SlackBuild16
-rw-r--r--academic/ds9/README17
-rw-r--r--academic/ds9/ds9.SlackBuild29
-rw-r--r--academic/ds9/ds9.desktop6
-rw-r--r--academic/ds9/ds9.info8
-rw-r--r--academic/ds9/slack-desc2
-rw-r--r--academic/easy_spice/easy_spice.SlackBuild16
-rw-r--r--academic/ed-v6/ed-v6.SlackBuild16
-rw-r--r--academic/edsim51di/edsim51di.SlackBuild16
-rw-r--r--academic/engauge/engauge.SlackBuild16
-rw-r--r--academic/engauge/engauge.info2
-rw-r--r--academic/ent/ent.SlackBuild16
-rw-r--r--academic/eprover/eprover.SlackBuild16
-rw-r--r--academic/equalx/equalx.SlackBuild16
-rw-r--r--academic/ess/ess.SlackBuild16
-rw-r--r--academic/evopedia_qt/evopedia_qt.SlackBuild16
-rw-r--r--academic/exonerate/exonerate.SlackBuild20
-rw-r--r--academic/extrema/extrema.SlackBuild16
-rw-r--r--academic/fann/fann.SlackBuild16
-rw-r--r--academic/fastqc/fastqc.SlackBuild16
-rw-r--r--academic/fet/fet.SlackBuild18
-rw-r--r--academic/fet/fet.info8
-rw-r--r--academic/fiji/README2
-rw-r--r--academic/fiji/fiji.SlackBuild37
-rw-r--r--academic/fiji/fiji.info12
-rw-r--r--academic/finchtv/finchtv.SlackBuild18
-rw-r--r--academic/finchtv/finchtv.info2
-rw-r--r--academic/fityk/README2
-rw-r--r--academic/fityk/fityk.SlackBuild16
-rw-r--r--academic/flann/flann.SlackBuild16
-rw-r--r--academic/flashqard/flashqard.SlackBuild16
-rw-r--r--academic/flexbar/flexbar.SlackBuild16
-rw-r--r--academic/free42/free42.SlackBuild16
-rw-r--r--academic/g3data/g3data.SlackBuild16
-rw-r--r--academic/galculator/galculator.SlackBuild16
-rw-r--r--academic/gaw3/gaw3.SlackBuild16
-rw-r--r--academic/gchemutils/gchemutils.SlackBuild18
-rw-r--r--academic/gcompris-qt/gcompris-qt.SlackBuild18
-rw-r--r--academic/gcompris-qt/gcompris-qt.info14
-rw-r--r--academic/gcompris/gcompris.SlackBuild16
-rw-r--r--academic/gcompris/gcompris.info4
-rw-r--r--academic/geda-gaf/geda-gaf.SlackBuild24
-rw-r--r--academic/geda-gaf/geda-gaf.info8
-rw-r--r--academic/gelemental/gelemental.SlackBuild18
-rw-r--r--academic/gelemental/gelemental.info2
-rw-r--r--academic/geneconv/README5
-rw-r--r--academic/geneconv/geneconv.SlackBuild26
-rw-r--r--academic/genius/README2
-rw-r--r--academic/genius/genius.SlackBuild16
-rw-r--r--academic/genometools/gcc10.patch88
-rw-r--r--academic/genometools/genometools.SlackBuild33
-rw-r--r--academic/genpak/genpak.SlackBuild36
-rw-r--r--academic/geomview/geomview.SlackBuild16
-rw-r--r--academic/gerbv/gerbv.SlackBuild16
-rw-r--r--academic/getdp/getdp.SlackBuild16
-rw-r--r--academic/ggobi/ggobi.SlackBuild16
-rw-r--r--academic/ghemical/ghemical.SlackBuild16
-rw-r--r--academic/glpk/glpk.SlackBuild16
-rw-r--r--academic/gmsh/gmsh.SlackBuild16
-rw-r--r--academic/gnucap/gnucap.SlackBuild16
-rw-r--r--academic/gp2fasta/gp2fasta.SlackBuild16
-rw-r--r--academic/gpredict/gpredict.SlackBuild22
-rw-r--r--academic/grace/grace.SlackBuild16
-rw-r--r--academic/gresistor/gresistor.SlackBuild16
-rw-r--r--academic/gretl/gretl.SlackBuild16
-rw-r--r--academic/gretl/gretl.info2
-rw-r--r--academic/gri/gri.SlackBuild16
-rw-r--r--academic/grpn/grpn.SlackBuild16
-rw-r--r--academic/gspiceui/gspiceui.SlackBuild16
-rw-r--r--academic/gtkwave/gtkwave.SlackBuild16
-rw-r--r--academic/gtypist/gtypist.SlackBuild16
-rw-r--r--academic/gwyddion/README2
-rw-r--r--academic/gwyddion/gwyddion.SlackBuild16
-rw-r--r--academic/h5utils/h5utils.SlackBuild16
-rw-r--r--academic/harminv/harminv.SlackBuild16
-rw-r--r--academic/hyphy/hyphy.SlackBuild43
-rw-r--r--academic/hyphy/hyphy.info6
-rw-r--r--academic/iTest/iTest.SlackBuild16
-rw-r--r--academic/io_lib/io_lib.SlackBuild20
-rw-r--r--academic/io_lib/io_lib.info6
-rw-r--r--academic/irsim/irsim.SlackBuild16
-rw-r--r--academic/isoelectric-point/isoelectric-point.SlackBuild16
-rw-r--r--academic/itex2mml/itex2mml.SlackBuild16
-rw-r--r--academic/jalview/jalview.SlackBuild20
-rw-r--r--academic/jalview/jalview.info8
-rw-r--r--academic/jellyfish_k-mer/jellyfish_k-mer.SlackBuild18
-rw-r--r--academic/jpicedt/jpicedt.SlackBuild16
-rw-r--r--academic/jugglinglab/jugglinglab.SlackBuild16
-rw-r--r--academic/karma/karma.SlackBuild16
-rw-r--r--academic/kile/README4
-rw-r--r--academic/kile/doinst.sh13
-rw-r--r--academic/kile/kile.info10
-rw-r--r--academic/kile/slack-desc19
-rw-r--r--academic/kiwisolver/kiwisolver.SlackBuild16
-rw-r--r--academic/klavaro/klavaro.SlackBuild16
-rw-r--r--academic/klu/klu.SlackBuild16
-rw-r--r--academic/knime/knime.SlackBuild16
-rw-r--r--academic/kraken/kraken.SlackBuild18
-rw-r--r--academic/ktikz/ktikz.SlackBuild64
-rw-r--r--academic/ktikz/ktikz.info6
-rw-r--r--academic/kurso/kurso.SlackBuild16
-rw-r--r--academic/labplot2/README3
-rw-r--r--academic/labplot2/labplot2.SlackBuild16
-rw-r--r--academic/labplot2/labplot2.info2
-rw-r--r--academic/ladr/ladr.SlackBuild16
-rw-r--r--academic/ladr/ladr.info2
-rw-r--r--academic/lalnview/lalnview.SlackBuild18
-rw-r--r--academic/lapack95/lapack95.SlackBuild16
-rw-r--r--academic/lapacke/README2
-rw-r--r--academic/lapacke/lapacke.SlackBuild26
-rw-r--r--academic/lapacke/lapacke.info6
-rw-r--r--academic/lapacke/patches/cmake-piecewise.diff165
-rw-r--r--academic/latex2html/latex2html.SlackBuild16
-rw-r--r--academic/ldl/ldl.SlackBuild16
-rw-r--r--academic/libghemical/libghemical.SlackBuild16
-rw-r--r--academic/libqalculate/README4
-rw-r--r--academic/libqalculate/libqalculate.SlackBuild102
-rw-r--r--academic/libqalculate/libqalculate.info10
-rw-r--r--academic/libqalculate/slack-desc19
-rw-r--r--academic/link-grammar/link-grammar.SlackBuild16
-rw-r--r--academic/locarna/locarna.SlackBuild16
-rw-r--r--academic/loggerpro/README12
-rw-r--r--academic/loggerpro/doinst.sh14
-rw-r--r--academic/loggerpro/loggerpro.SlackBuild156
-rw-r--r--academic/loggerpro/loggerpro.info10
-rw-r--r--academic/loggerpro/slack-desc19
-rw-r--r--academic/lpsolve/lpsolve.SlackBuild16
-rw-r--r--academic/mafft/mafft.SlackBuild20
-rw-r--r--academic/mafft/mafft.info6
-rw-r--r--academic/magic/magic.SlackBuild16
-rw-r--r--academic/mathics/README5
-rw-r--r--academic/mathics/mathics.SlackBuild18
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-rw-r--r--academic/mathomatic/mathomatic.SlackBuild16
-rw-r--r--academic/matio/matio.SlackBuild16
-rw-r--r--academic/maxima/maxima.SlackBuild20
-rw-r--r--academic/maxima/maxima.info10
-rw-r--r--academic/meep/meep.SlackBuild16
-rw-r--r--academic/megax/megax.SlackBuild18
-rw-r--r--academic/megax/megax.info10
-rw-r--r--academic/meme-db-gomo/meme-db-gomo.SlackBuild18
-rw-r--r--academic/meme-db-gomo/meme-db-gomo.info4
-rw-r--r--academic/meme-db-motif/meme-db-motif.SlackBuild20
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-rw-r--r--academic/meme-db-tgene/meme-db-tgene.SlackBuild18
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-rw-r--r--academic/mendeleydesktop/README8
-rw-r--r--academic/mendeleydesktop/mendeleydesktop.SlackBuild18
-rw-r--r--academic/metis/metis.SlackBuild16
-rw-r--r--academic/mkDSSP/makefile.patch76
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-rw-r--r--academic/mkDSSP/thread_include.patch23
-rw-r--r--academic/mpb/mpb.SlackBuild16
-rw-r--r--academic/mrbayes/mrbayes.SlackBuild18
-rw-r--r--academic/muscle/muscle.SlackBuild18
-rw-r--r--academic/ncbi-blast+/ncbi-blast+.SlackBuild20
-rw-r--r--academic/ncbi-blast+/ncbi-blast+.info8
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-rw-r--r--academic/novocraft/novocraft.SlackBuild16
-rw-r--r--academic/octave/README6
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-rw-r--r--academic/octave/patches/0348f3f57e3c.diff170
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-rw-r--r--academic/openboard/README4
-rw-r--r--academic/openboard/doinst.sh3
-rw-r--r--academic/openboard/openboard.SlackBuild (renamed from academic/kile/kile.SlackBuild)89
-rw-r--r--academic/openboard/openboard.desktop10
-rw-r--r--academic/openboard/openboard.info10
-rw-r--r--academic/openboard/quazip.patch41
-rw-r--r--academic/openboard/run-in-a-window.patch154
-rw-r--r--academic/openboard/slack-desc19
-rw-r--r--academic/pal2nal/pal2nal.SlackBuild18
-rw-r--r--academic/paml/paml.SlackBuild26
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-rw-r--r--academic/pari/pari.SlackBuild23
-rw-r--r--academic/pari/pari.info6
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-rw-r--r--academic/patsy/patsy.info2
-rw-r--r--academic/pcalc/pcalc.SlackBuild16
-rw-r--r--academic/pcb/pcb.SlackBuild16
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-rw-r--r--academic/pianobooster/pianobooster.SlackBuild16
-rw-r--r--academic/plasmidomics/plasmidomics.SlackBuild18
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-rw-r--r--academic/primer3/primer3.SlackBuild22
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-rw-r--r--academic/pspp/pspp.info2
-rw-r--r--academic/pulseview/pulseview.SlackBuild20
-rw-r--r--academic/pulseview/pulseview.info8
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-rw-r--r--academic/pyCRAC/pyCRAC.info2
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-rw-r--r--academic/pysam/pysam.info2
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-rw-r--r--academic/qalculate-gtk/qalculate-gtk.info2
-rw-r--r--academic/qcl/qcl.SlackBuild16
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-rw-r--r--academic/reduce-algebra/reduce-algebra.SlackBuild16
-rw-r--r--academic/root/root.SlackBuild25
-rw-r--r--academic/root/root.info8
-rw-r--r--academic/rpy2/rpy2.SlackBuild18
-rw-r--r--academic/rpy2/rpy2.info6
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-rw-r--r--academic/sage/sage.SlackBuild20
-rw-r--r--academic/sage/sage.info6
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-rw-r--r--academic/samtools/samtools.SlackBuild20
-rw-r--r--academic/samtools/samtools.info6
-rw-r--r--academic/scidavis/README10
-rw-r--r--academic/scidavis/scidavis.SlackBuild57
-rw-r--r--academic/scidavis/scidavis.info8
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-rw-r--r--academic/seqkit/seqkit.info10
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-rw-r--r--academic/sequence-analysis/sequence-analysis.info2
-rw-r--r--academic/sigrok-cli/sigrok-cli.SlackBuild16
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-rw-r--r--academic/siril/siril.info2
-rw-r--r--academic/slatec/README5
-rw-r--r--academic/slatec/makedoc.sed81
-rw-r--r--academic/slatec/slack-desc19
-rw-r--r--academic/slatec/slatec.SlackBuild98
-rw-r--r--academic/slatec/slatec.info10
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-rw-r--r--academic/suitesparseconfig/suitesparseconfig.SlackBuild16
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-rw-r--r--academic/sword-data-kjv/sword-data-kjv.info4
-rw-r--r--academic/sword/sword.SlackBuild16
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-rw-r--r--academic/tiemu/tiemu.SlackBuild16
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-rw-r--r--academic/tophat/tophat.SlackBuild21
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-rw-r--r--academic/trfind/trfind.SlackBuild18
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-rw-r--r--academic/ucsc-blat/ucsc-blat.SlackBuild18
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-rw-r--r--academic/umfpack/umfpack.SlackBuild16
-rw-r--r--academic/units/units.SlackBuild16
-rw-r--r--academic/vCAPS_coevolution/README13
-rw-r--r--academic/vCAPS_coevolution/vCAPS_coevolution.SlackBuild20
-rw-r--r--academic/vcftools/vcftools.SlackBuild18
-rw-r--r--academic/verilator/verilator.SlackBuild16
-rw-r--r--academic/verilator/verilator.info2
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-rw-r--r--academic/veusz/veusz.info2
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-rw-r--r--academic/wxMaxima/wxMaxima.SlackBuild81
-rw-r--r--academic/wxMaxima/wxMaxima.info8
-rw-r--r--academic/wxmacmolplt/README8
-rw-r--r--academic/wxmacmolplt/doinst.sh14
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-rw-r--r--academic/wxmacmolplt/wxmacmolplt-7.2.1-raman.patch33
-rw-r--r--academic/wxmacmolplt/wxmacmolplt-7.4-firefly.patch11
-rw-r--r--academic/wxmacmolplt/wxmacmolplt-7.4.4-files.patch22
-rw-r--r--academic/wxmacmolplt/wxmacmolplt.SlackBuild123
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-rw-r--r--academic/xiphos/xiphos.SlackBuild16
-rw-r--r--academic/xiphos/xiphos.info2
-rw-r--r--academic/xoscope/README2
-rw-r--r--academic/xoscope/xoscope.SlackBuild22
-rw-r--r--academic/xoscope/xoscope.info6
-rw-r--r--academic/z3/z3.SlackBuild16
-rw-r--r--academic/zotero/zotero.SlackBuild16
489 files changed, 5550 insertions, 3078 deletions
diff --git a/academic/CAFS_divergence/CAFS_divergence.SlackBuild b/academic/CAFS_divergence/CAFS_divergence.SlackBuild
index 28b2385816..e69a064cab 100644
--- a/academic/CAFS_divergence/CAFS_divergence.SlackBuild
+++ b/academic/CAFS_divergence/CAFS_divergence.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for CAFS_divergence
-# Copyright 2017 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,12 +22,15 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=CAFS_divergence
BINNAM=cafs
SYSTOS=linux
VERSION=${VERSION:-1.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -82,4 +92,4 @@ mkdir -p $PKG/install
sed "s/@VERSION@/$VERSION/" < $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/CAPS_coevolution/CAPS_coevolution.SlackBuild b/academic/CAPS_coevolution/CAPS_coevolution.SlackBuild
index 99f177b84b..e18c9f2b26 100644
--- a/academic/CAPS_coevolution/CAPS_coevolution.SlackBuild
+++ b/academic/CAPS_coevolution/CAPS_coevolution.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for CAPS_coevolution
-# Copyright 2017 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=CAPS_coevolution
VERSION=${VERSION:-2.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -98,4 +108,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/CAPS_coevolution/README b/academic/CAPS_coevolution/README
index b0d477c7a2..47f542a809 100644
--- a/academic/CAPS_coevolution/README
+++ b/academic/CAPS_coevolution/README
@@ -13,7 +13,10 @@ In addition, a test which assesses whether two proteins are interacting
is implemented.
NOTE:
-The script just repackages the binaries provided from upstream.
+The script just repackages the binaries provided from upstream. If you
+want to compile the program from source check "vCAPS_coevolution", which
+also comes with an unofficial patch that extends the verbosity of the
+results.
CITING:
CAPS: coevolution analysis using protein sequences. Fares MA, McNally D.
diff --git a/academic/Data2FCS/Data2FCS.SlackBuild b/academic/Data2FCS/Data2FCS.SlackBuild
index 161057249d..46937a2e26 100644
--- a/academic/Data2FCS/Data2FCS.SlackBuild
+++ b/academic/Data2FCS/Data2FCS.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Data2FCS
-# Copyright 2017 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,15 +22,25 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=Data2FCS
PRGADD=FCS2Data
VERSION=${VERSION:-1.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ARCH=noarch
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -84,4 +94,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/Data2FCS/Data2FCS.info b/academic/Data2FCS/Data2FCS.info
index 3a6d0bcf0f..4f36916b72 100644
--- a/academic/Data2FCS/Data2FCS.info
+++ b/academic/Data2FCS/Data2FCS.info
@@ -7,6 +7,6 @@ MD5SUM="59b89861defa64a34ede2ea97e1194b5 \
aa327e522bfc9b18e72f20ae1dbcdace"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="jdk"
+REQUIRES="adoptopenjdk"
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/DendroPy/DendroPy.SlackBuild b/academic/DendroPy/DendroPy.SlackBuild
index 83d5387ca2..274424b4fd 100644
--- a/academic/DendroPy/DendroPy.SlackBuild
+++ b/academic/DendroPy/DendroPy.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for DendroPy
-# Copyright 2019 Petar Petrov slackalaxy@gmail.com
+# Copyright 2019-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=DendroPy
VERSION=${VERSION:-4.4.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -83,4 +93,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/EMBASSY/EMBASSY.SlackBuild b/academic/EMBASSY/EMBASSY.SlackBuild
index 81c21fe1b0..4003914686 100644
--- a/academic/EMBASSY/EMBASSY.SlackBuild
+++ b/academic/EMBASSY/EMBASSY.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for EMBASSY
-# Copyright 2011-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,26 +22,36 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=EMBASSY
VERSION=${VERSION:-6.6.0} # Keep this the same version as EMBOSS
-BUILD=${BUILD:-1}
+BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
@@ -307,8 +317,8 @@ make install DESTDIR=$PKG
# Build PHYLIPNEW
cd $TMP/$PRGNAM-$VERSION/$PHYLIPNEW
-CFLAGS="$SLKCFLAGS" \
-CXXFLAGS="$SLKCFLAGS" \
+CFLAGS="$SLKCFLAGS -fcommon" \
+CXXFLAGS="$SLKCFLAGS -fcommon" \
./configure \
--prefix=/usr \
--libdir=/usr/lib${LIBDIRSUFFIX} \
@@ -392,4 +402,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/EMBOSS/EMBOSS.SlackBuild b/academic/EMBOSS/EMBOSS.SlackBuild
index 2d139f3a76..fab49fe818 100644
--- a/academic/EMBOSS/EMBOSS.SlackBuild
+++ b/academic/EMBOSS/EMBOSS.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for EMBOSS
-# Copyright 2011-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,26 +22,36 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=EMBOSS
VERSION=${VERSION:-6.6.0}
-BUILD=${BUILD:-1}
+BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
@@ -105,4 +115,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/EMBOSS/EMBOSS.info b/academic/EMBOSS/EMBOSS.info
index 6cce29ea76..2fef385af0 100644
--- a/academic/EMBOSS/EMBOSS.info
+++ b/academic/EMBOSS/EMBOSS.info
@@ -5,6 +5,6 @@ DOWNLOAD="https://sourceforge.net/projects/sboppetrov/files/EMBOSS/EMBOSS-6.6.0.
MD5SUM="cc3fca80cb0618deb10fa0d29fe90e4b"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="jdk"
+REQUIRES="adoptopenjdk"
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/FCSalyzer/FCSalyzer.SlackBuild b/academic/FCSalyzer/FCSalyzer.SlackBuild
index e39624d4f3..de48dcbf08 100644
--- a/academic/FCSalyzer/FCSalyzer.SlackBuild
+++ b/academic/FCSalyzer/FCSalyzer.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for FCSalyzer
-# Copyright 2017-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,15 +22,25 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=FCSalyzer
-VERSION=${VERSION:-0.9.18_alpha}
+VERSION=${VERSION:-0.9.22_alpha}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ARCH=noarch
-SRCVER=0.9.18-alpha
+SRCVER=0.9.22-alpha
+
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
-CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -40,9 +50,10 @@ set -e
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
-rm -rf ${PRGNAM}\ ${SRCVER}
+rm -rf $TMP/$PRGNAM-$VERSION
+mkdir -p $TMP/$PRGNAM-$VERSION
+cd $TMP/$PRGNAM-$VERSION
unzip $CWD/${PRGNAM}\ ${SRCVER}.zip
-cd ${PRGNAM}\ ${SRCVER}
chown -R root:root .
find -L . \
@@ -51,7 +62,7 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
-install -D -m755 ${PRGNAM}.jar $PKG/usr/bin/$PRGNAM.jar
+install -D -m755 ${PRGNAM}_alternative.jar $PKG/usr/bin/$PRGNAM.jar
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
cp -a \
@@ -68,4 +79,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/FCSalyzer/FCSalyzer.info b/academic/FCSalyzer/FCSalyzer.info
index 9e4a0d1d4e..fea6661e19 100644
--- a/academic/FCSalyzer/FCSalyzer.info
+++ b/academic/FCSalyzer/FCSalyzer.info
@@ -1,10 +1,10 @@
PRGNAM="FCSalyzer"
-VERSION="0.9.18_alpha"
+VERSION="0.9.22_alpha"
HOMEPAGE="https://sourceforge.net/projects/fcsalyzer/"
-DOWNLOAD="https://sourceforge.net/projects/fcsalyzer/files/Version%200.9.18-alpha/FCSalyzer%200.9.18-alpha.zip"
-MD5SUM="9926d1af7b9865615a525c0e1bf0ada2"
+DOWNLOAD="https://sourceforge.net/projects/fcsalyzer/files/Version%200.9.22-alpha/FCSalyzer%200.9.22-alpha.zip"
+MD5SUM="5a100f3fb10acfcc3935d847c2a386a1"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="jdk"
+REQUIRES="adoptopenjdk"
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/FreeFem/FreeFem.SlackBuild b/academic/FreeFem/FreeFem.SlackBuild
index 08df0908f8..30ca0bf8dd 100644
--- a/academic/FreeFem/FreeFem.SlackBuild
+++ b/academic/FreeFem/FreeFem.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for FreeFem
# Based on the Slackware 14.2 SlackBuild and on PKGBUILD script for freefem from AUR
@@ -23,10 +23,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=FreeFem
VERSION=${VERSION:-4.5}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCVER=${SRCVER:-4.5} # Variable used in some versions that are numbered as x.y-z
if [ -z "$ARCH" ]; then
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -102,4 +112,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/Gblocks/Gblocks.SlackBuild b/academic/Gblocks/Gblocks.SlackBuild
index 2a71e48b91..168de23746 100644
--- a/academic/Gblocks/Gblocks.SlackBuild
+++ b/academic/Gblocks/Gblocks.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Gblocks
-# Copyright 2011-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=Gblocks
VERSION=${VERSION:-0.91b}
-BUILD=${BUILD:-1}
+BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -65,15 +75,15 @@ tar xvf $CWD/$TARNAME.tar.Z
cd ${PRGNAM}_${VERSION}
chown -R root:root .
find -L . \
- \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 -o -perm 511 \) \
- -exec chmod 755 {} \; -o \
- \( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \
- -exec chmod 644 {} \;
+ \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
+ -o -perm 511 \) -exec chmod 755 {} \; -o \
+ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
+ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
install -D -m755 Gblocks $PKG/usr/bin/$PRGNAM
mkdir -p $PKG/usr/share/$PRGNAM
-cp -a more_alignments/* $PKG/usr/share/$PRGNAM
+cp -a more_alignments nad3.pir paths $PKG/usr/share/$PRGNAM
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
@@ -87,4 +97,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/GeoGebra/GeoGebra.SlackBuild b/academic/GeoGebra/GeoGebra.SlackBuild
index cf6bdd098f..07bc5d231c 100644
--- a/academic/GeoGebra/GeoGebra.SlackBuild
+++ b/academic/GeoGebra/GeoGebra.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for GeoGebra
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=GeoGebra
VERSION=${VERSION:-5.0.361.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -92,4 +102,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild b/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild
index 7e859dd502..527985f8c5 100644
--- a/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild
+++ b/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Gridcoin-Research
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=Gridcoin-Research
-VERSION=${VERSION:-5.2.0.0}
+VERSION=${VERSION:-5.3.1.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
NUMJOBS=${NUMJOBS:-1}
if [ -z "$ARCH" ]; then
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -70,7 +80,7 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
-if [ "${QRENC:-no}" = "yes" ]; then
+if [ "${QRENC:-yes}" = "yes" ]; then
useqr="--with-qrencode"
else
useqr="--without-qrencode"
@@ -133,4 +143,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/Gridcoin-Research/Gridcoin-Research.desktop b/academic/Gridcoin-Research/Gridcoin-Research.desktop
deleted file mode 100644
index 5e6896f326..0000000000
--- a/academic/Gridcoin-Research/Gridcoin-Research.desktop
+++ /dev/null
@@ -1,9 +0,0 @@
-[Desktop Entry]
-Type=Application
-Name=Gridcoin
-Comment=Gridcoin is an open source cryptocurrency (Ticker: GRC) which securely rewards volunteer computing performed on the BOINC platform.
-Exec=gridcoinresearch
-Icon=grc
-Categories=Education;Science;
-Terminal=false
-Hidden=false
diff --git a/academic/Gridcoin-Research/Gridcoin-Research.info b/academic/Gridcoin-Research/Gridcoin-Research.info
index 884cd98c5e..dd8477dc76 100644
--- a/academic/Gridcoin-Research/Gridcoin-Research.info
+++ b/academic/Gridcoin-Research/Gridcoin-Research.info
@@ -1,10 +1,10 @@
PRGNAM="Gridcoin-Research"
-VERSION="5.2.0.0"
+VERSION="5.3.1.0"
HOMEPAGE="https://gridcoin.us/"
-DOWNLOAD="https://github.com/gridcoin-community/Gridcoin-Research/archive/5.2.0.0/Gridcoin-Research-5.2.0.0.tar.gz"
-MD5SUM="10fe26172b1155da09269d28b9be7c9c"
+DOWNLOAD="https://github.com/gridcoin-community/Gridcoin-Research/archive/5.3.1.0/Gridcoin-Research-5.3.1.0.tar.gz"
+MD5SUM="773b104454e9c35f0594e28d88e04ed7"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
MAINTAINER="Edward W. Koenig"
-EMAIL="kingbeowulf@gmail.com"
+EMAIL="kingbeowulf@linuxgalaxy.org"
diff --git a/academic/Gridcoin-Research/README b/academic/Gridcoin-Research/README
index dfccd82244..308e5898d0 100644
--- a/academic/Gridcoin-Research/README
+++ b/academic/Gridcoin-Research/README
@@ -3,12 +3,11 @@ rewards volunteer computing performed on the BOINC platform. BOINC is
an open source volunteer computing grid which combines the processing
power of individual users for the purposes of scientific research.
-QT5, qrencode and miniupnpc are optional (available on SBo) to build
-GUI, QR and UPnP support. QT5 will be detected automatically, for the
-others, run script as
+qrencode support is detected automatically; override with
+ QRENC=no ./Gridcoin-Research.SlackBuild
-QRENC=yes ./Gridcoin-Research.SlackBuild
-UPNP=yes ./Gridcoin-Research.SlackBuild
+Miniupnpc (available on SBo) is optional for UPnP support. Run script as
+ UPNP=yes ./Gridcoin-Research.SlackBuild
You will need to edit the configuration file gridcoinresearch.conf
in /etc/Gridcoin-Research/ and place it in your home directory
diff --git a/academic/HMMER/HMMER.SlackBuild b/academic/HMMER/HMMER.SlackBuild
index e0e4f5bfcf..31412857ed 100644
--- a/academic/HMMER/HMMER.SlackBuild
+++ b/academic/HMMER/HMMER.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for HMMER
-# Copyright 2016-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2016-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=HMMER
-VERSION=${VERSION:-3.3.1}
+VERSION=${VERSION:-3.3.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=hmmer
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -106,4 +116,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/HMMER/HMMER.info b/academic/HMMER/HMMER.info
index 80f7a1ebe5..3d8efe947b 100644
--- a/academic/HMMER/HMMER.info
+++ b/academic/HMMER/HMMER.info
@@ -1,10 +1,10 @@
PRGNAM="HMMER"
-VERSION="3.3.1"
+VERSION="3.3.2"
HOMEPAGE="http://hmmer.org/"
-DOWNLOAD="http://eddylab.org/software/hmmer/hmmer-3.3.1.tar.gz"
-MD5SUM="07da6661a17bd4ddbaded4a0dc9c5b6d"
+DOWNLOAD="http://eddylab.org/software/hmmer/hmmer-3.3.2.tar.gz"
+MD5SUM="ea03d88b4e8228a1dc6d84d56af27195"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="python3"
+REQUIRES=""
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/IGV/IGV.SlackBuild b/academic/IGV/IGV.SlackBuild
index 746d394ea4..8b3532ebcb 100644
--- a/academic/IGV/IGV.SlackBuild
+++ b/academic/IGV/IGV.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for IGV
-# Copyright 2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2020-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=IGV
-VERSION=${VERSION:-2.8.12}
+VERSION=${VERSION:-2.9.4}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
JDK=jdk-11
@@ -38,7 +41,14 @@ if [ "$ARCH" != "x86_64" ]; then
exit 1
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -81,4 +91,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/IGV/IGV.info b/academic/IGV/IGV.info
index f54e6a3a2d..cbfc74e093 100644
--- a/academic/IGV/IGV.info
+++ b/academic/IGV/IGV.info
@@ -1,10 +1,10 @@
PRGNAM="IGV"
-VERSION="2.8.12"
+VERSION="2.9.4"
HOMEPAGE="http://software.broadinstitute.org/software/igv/home"
DOWNLOAD="UNSUPPORTED"
MD5SUM=""
-DOWNLOAD_x86_64="https://data.broadinstitute.org/igv/projects/downloads/2.8/IGV_Linux_2.8.12_WithJava.zip"
-MD5SUM_x86_64="7ee4f59615726723964bd9e023baf136"
+DOWNLOAD_x86_64="https://data.broadinstitute.org/igv/projects/downloads/2.9/IGV_Linux_2.9.4_WithJava.zip"
+MD5SUM_x86_64="bf510e5f868daf5772ce51a4ce3213ab"
REQUIRES=""
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/IGV/README b/academic/IGV/README
index 7c1ec02a11..16f24fb788 100644
--- a/academic/IGV/README
+++ b/academic/IGV/README
@@ -5,3 +5,5 @@ and metadata, investigator-generated or publicly available, loaded from
local or cloud sources.
Please, check the package's documentation folder for citing information.
+
+NOTE: this comes with its own JAVA environment.
diff --git a/academic/ITK/ITK.SlackBuild b/academic/ITK/ITK.SlackBuild
index fd9e8128f0..afd0f0cc99 100644
--- a/academic/ITK/ITK.SlackBuild
+++ b/academic/ITK/ITK.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# SlackBuild script for ITK
@@ -24,11 +24,14 @@
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ITK
SRCNAM=InsightToolkit
-VERSION=${VERSION:-5.1.2}
+VERSION=${VERSION:-4.13.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -63,7 +73,7 @@ rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
rm -rf $SRCNAM-$VERSION
-tar xvf $CWD/$SRCNAM-$VERSION.tar.gz
+tar xvf $CWD/$SRCNAM-$VERSION.tar.xz
cd $SRCNAM-$VERSION
chown -R root:root .
find -L . \
@@ -72,13 +82,46 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
+patch -p1 <<'endpatch'
+--- InsightToolkit-4.13.2/Modules/ThirdParty/VNL/src/vxl/vcl/vcl_compiler.h.cp
++++ InsightToolkit-4.13.2/Modules/ThirdParty/VNL/src/vxl/vcl/vcl_compiler.h
+@@ -96,6 +96,28 @@
+ # define VCL_GCC_81
+ # else
+ # define VCL_GCC_80
++# endif
++# elif (__GNUC__==9)
++# define VCL_GCC_9
++# if (__GNUC_MINOR__ > 2 )
++# define VCL_GCC_93
++# elif (__GNUC_MINOR__ > 1 )
++# define VCL_GCC_92
++# elif (__GNUC_MINOR__ > 0 )
++# define VCL_GCC_91
++# else
++# define VCL_GCC_90
++# endif
++# elif (__GNUC__==10)
++# define VCL_GCC_10
++# if (__GNUC_MINOR__ > 2 )
++# define VCL_GCC_103
++# elif (__GNUC_MINOR__ > 1 )
++# define VCL_GCC_102
++# elif (__GNUC_MINOR__ > 0 )
++# define VCL_GCC_101
++# else
++# define VCL_GCC_100
+ # endif
+ # else
+ # error "Dunno about this gcc"
+endpatch
+
sed -i "s/lib\b/lib${LIBDIRSUFFIX}/" CMakeLists.txt
sed -i "s|/opj_config.h|& \$\{CMAKE_CURRENT_BINARY_DIR\}/openjpeg_mangle.h|" \
Modules/ThirdParty/GDCM/src/gdcm/Utilities/gdcmopenjpeg/src/lib/openjp2/CMakeLists.txt
mkdir -p build
cd build
- export "PATH=/opt/cmake-202x/bin:$PATH"
cmake \
-DCMAKE_C_FLAGS="$SLKCFLAGS" \
-DCMAKE_CXX_FLAGS="$SLKCFLAGS" \
@@ -89,7 +132,7 @@ cd build
-DBUILD_EXAMPLES=OFF \
-DITK_USE_SYSTEM_LIBRARIES=ON \
-DITK_USE_SYSTEM_DCMTK=ON \
- -DITK_USE_SYSTEM_EIGEN=OFF \
+ -DITK_USE_SYSTEM_DOUBLECONVERSION=ON \
-DITK_USE_SYSTEM_EXPAT=ON \
-DITK_USE_SYSTEM_FFTW=ON \
-DITK_USE_SYSTEM_HDF5=ON \
@@ -116,4 +159,4 @@ mkdir $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ITK/ITK.info b/academic/ITK/ITK.info
index 9479aaaac9..d72260cfa6 100644
--- a/academic/ITK/ITK.info
+++ b/academic/ITK/ITK.info
@@ -1,10 +1,10 @@
PRGNAM="ITK"
-VERSION="5.1.2"
+VERSION="4.13.2"
HOMEPAGE="https://itk.org"
-DOWNLOAD="https://github.com/InsightSoftwareConsortium/ITK/releases/download/v5.1.2/InsightToolkit-5.1.2.tar.gz"
-MD5SUM="e939fc61e7354eba20f98fbd7b034ec2"
+DOWNLOAD="https://github.com/InsightSoftwareConsortium/ITK/releases/download/v4.13.2/InsightToolkit-4.13.2.tar.xz"
+MD5SUM="d140ddabe22428e86bc5053e0d268872"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="cmake-202x double-conversion gtest hdf5"
+REQUIRES="double-conversion gtest hdf5"
MAINTAINER="Benjamin Trigona-Harany"
EMAIL="slackbuilds@jaxartes.net"
diff --git a/academic/Kst/Kst.SlackBuild b/academic/Kst/Kst.SlackBuild
index 527bc6ba1b..ebb7cca8f8 100644
--- a/academic/Kst/Kst.SlackBuild
+++ b/academic/Kst/Kst.SlackBuild
@@ -1,13 +1,16 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Kst
# Based on Slackware 14.1 SlackBuild and AUR PKGBUILD for Kst
# Written by Fellype do Nascimento <fellype(at)gmail.com>
# last modification of this build script: 2014/12/10
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=Kst
VERSION=${VERSION:-2.0.8}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -17,7 +20,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -83,4 +93,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/Kst/README b/academic/Kst/README
index cb1ad83042..87d0adcf94 100644
--- a/academic/Kst/README
+++ b/academic/Kst/README
@@ -16,7 +16,6 @@ without KDE, but you get additional features when running on a platform
with KDE).
Optional dependencies are:
-- gsl (many very useful data analysis plugins are based) - RECOMMENDED
- netcdf (which provides support for files in the netCDF format)
- muParser (which is used in the general non-linear fitting plugin)
- GetData (which provides support for files in the Dirfile format)
diff --git a/academic/MetaPhlAn2/MetaPhlAn2.SlackBuild b/academic/MetaPhlAn2/MetaPhlAn2.SlackBuild
index 48492049c4..a64fe00125 100644
--- a/academic/MetaPhlAn2/MetaPhlAn2.SlackBuild
+++ b/academic/MetaPhlAn2/MetaPhlAn2.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for MetaPhlAn2
-# Copyright 2019-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2019-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,14 +22,15 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=MetaPhlAn2
-VERSION=${VERSION:-2.9.5.3}
+VERSION=${VERSION:-20201202_git4e4416}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
-SRCNAM=metaphlan2
-AUTHOR=biobakery
-COMMIT=3a075f914593
+COMMIT=4e4416321c75828ac8ea55d36f5a65ebd39058c5
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -38,7 +39,14 @@ if [ -z "$ARCH" ]; then
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -51,15 +59,15 @@ set -e
if [ -e $CWD/$COMMIT.tar.gz ]; then
TARBALL=${COMMIT}
else
- TARBALL=${AUTHOR}-${SRCNAM}-${COMMIT}
+ TARBALL=${PRGNAM}-${COMMIT}
fi
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
-rm -rf ${AUTHOR}-${SRCNAM}-${COMMIT}
+rm -rf ${PRGNAM}-${COMMIT}
tar xvf $CWD/$TARBALL.tar.gz
-cd ${AUTHOR}-${SRCNAM}-${COMMIT}
+cd ${PRGNAM}-${COMMIT}
chown -R root:root .
find -L . \
\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
@@ -78,9 +86,12 @@ cd $PKG/usr/bin
ln -s ../share/$PRGNAM/strainphlan.py
cd -
+mkdir -p $PKG/usr/share/$PRGNAM
+cp -a strainphlan_tutorial $PKG/usr/share/$PRGNAM
+
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
cp -a \
- README.md changeset.txt license.txt strainphlan_tutorial \
+ README.md changeset.txt license.txt \
$PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
cat $CWD/References > $PKG/usr/doc/$PRGNAM-$VERSION/References
@@ -89,4 +100,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/MetaPhlAn2/MetaPhlAn2.info b/academic/MetaPhlAn2/MetaPhlAn2.info
index f01033053b..af4e05652d 100644
--- a/academic/MetaPhlAn2/MetaPhlAn2.info
+++ b/academic/MetaPhlAn2/MetaPhlAn2.info
@@ -1,8 +1,8 @@
PRGNAM="MetaPhlAn2"
-VERSION="2.9.5.3"
+VERSION="20201202_git4e4416"
HOMEPAGE="http://huttenhower.sph.harvard.edu/metaphlan2"
-DOWNLOAD="https://bitbucket.org/biobakery/metaphlan2/get/3a075f914593.tar.gz"
-MD5SUM="956f8f6897a40e15cec38eb26cdcf97c"
+DOWNLOAD="https://github.com/biobakery/MetaPhlAn2/archive/4e4416/4e4416321c75828ac8ea55d36f5a65ebd39058c5.tar.gz"
+MD5SUM="7f07d766a84b0da247a404c05e6f9eb6"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="pysam biopython msgpack-python pandas scipy DendroPy bowtie2 muscle samtools-legacy bcftools ncbi-blast+ RAxML"
diff --git a/academic/Mnemosyne/Mnemosyne.SlackBuild b/academic/Mnemosyne/Mnemosyne.SlackBuild
index 6de86d1a48..d8a1562ceb 100644
--- a/academic/Mnemosyne/Mnemosyne.SlackBuild
+++ b/academic/Mnemosyne/Mnemosyne.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Mnemosyne
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=Mnemosyne
VERSION=${VERSION:-2.6.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -88,4 +98,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/Mnemosyne/Mnemosyne.info b/academic/Mnemosyne/Mnemosyne.info
index 8d6fc3ac9a..1379980bc3 100644
--- a/academic/Mnemosyne/Mnemosyne.info
+++ b/academic/Mnemosyne/Mnemosyne.info
@@ -5,6 +5,6 @@ DOWNLOAD="https://downloads.sourceforge.net/project/mnemosyne-proj/mnemosyne/mne
MD5SUM="2b2f8fd019370af4d107f696f29ee3a2"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="python3-PyQt5 PyOpenGL CherryPy matplotlib WebOb"
+REQUIRES="PyOpenGL CherryPy matplotlib WebOb"
MAINTAINER="R. S. Ananda Murthy"
EMAIL="rsamurti@gmail.com"
diff --git a/academic/Mnemosyne/README b/academic/Mnemosyne/README
index a4ee7f3e3e..b3e2d1449f 100644
--- a/academic/Mnemosyne/README
+++ b/academic/Mnemosyne/README
@@ -5,6 +5,3 @@ before you can start using it. At the same time, under the hood
it is very powerful, and its architecture allows infinite
extensibility and customisibility through plugins and a
scripting API, for the benefit of power users.
-
-Optional Dependency: texlive (for entering mathematical equations in
-cards using LaTeX)
diff --git a/academic/OpenFOAM/OpenFOAM.SlackBuild b/academic/OpenFOAM/OpenFOAM.SlackBuild
index 14db243780..5e3a5a4c9c 100644
--- a/academic/OpenFOAM/OpenFOAM.SlackBuild
+++ b/academic/OpenFOAM/OpenFOAM.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for OpenFOAM
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=OpenFOAM
VERSION=${VERSION:-8}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -94,4 +104,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/PhyML/PhyML.SlackBuild b/academic/PhyML/PhyML.SlackBuild
index 893454e123..41e235cda0 100644
--- a/academic/PhyML/PhyML.SlackBuild
+++ b/academic/PhyML/PhyML.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for PhyML
-# Copyright 2011-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -24,10 +24,13 @@
# Thanks to Niels Horn for some handy modifications and corrections.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=PhyML
VERSION=${VERSION:-3.3.20200621}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=$(echo $PRGNAM | tr A-Z a-z)
@@ -39,7 +42,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -167,4 +177,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/PyAMG/PyAMG.SlackBuild b/academic/PyAMG/PyAMG.SlackBuild
index 6d1b8c0aee..6b17681db1 100644
--- a/academic/PyAMG/PyAMG.SlackBuild
+++ b/academic/PyAMG/PyAMG.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for PyAMG
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=PyAMG
VERSION=${VERSION:-2.1.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -82,4 +92,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/QtiPlot/QtiPlot.SlackBuild b/academic/QtiPlot/QtiPlot.SlackBuild
index db8b2102a3..9457c38d8e 100644
--- a/academic/QtiPlot/QtiPlot.SlackBuild
+++ b/academic/QtiPlot/QtiPlot.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for QtiPlot
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=QtiPlot
VERSION=${VERSION:-0.9.8.9}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=$(echo $PRGNAM | tr A-Z a-z)
@@ -40,7 +43,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -216,4 +226,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/R/R.SlackBuild b/academic/R/R.SlackBuild
index 3f31ad4a38..a7c14b12ae 100644
--- a/academic/R/R.SlackBuild
+++ b/academic/R/R.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# SlackBuild script for R
@@ -23,10 +23,13 @@
# with this program (most likely, a file named COPYING). If not, see
# <http://www.gnu.org/licenses/>.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=R
VERSION=${VERSION:-4.0.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ "${R_SHLIB:-yes}" = "yes" ]; then
r_shlib="--enable-R-shlib"
@@ -47,7 +50,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -111,4 +121,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/R/R.info b/academic/R/R.info
index 04109237e7..e06bdf1195 100644
--- a/academic/R/R.info
+++ b/academic/R/R.info
@@ -5,6 +5,6 @@ DOWNLOAD="https://cran.r-project.org/src/base/R-4/R-4.0.0.tar.gz"
MD5SUM="48c487c68112cb3191f3015c6277a50b"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="pcre2"
+REQUIRES=""
MAINTAINER="Andrew Payne"
EMAIL="phalange@komputermatrix.com"
diff --git a/academic/RAxML/RAxML.SlackBuild b/academic/RAxML/RAxML.SlackBuild
index 0c4e98a6ce..a9836a64df 100644
--- a/academic/RAxML/RAxML.SlackBuild
+++ b/academic/RAxML/RAxML.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for RAxML
-# Copyright 2019 Petar Petrov slackalaxy@gmail.com
+# Copyright 2019-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=RAxML
VERSION=${VERSION:-8.2.12}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -76,7 +86,7 @@ cp Makefile.gcc Makefile
sed -i "/^CFLAGS/s/=/+=/" Makefile
sed -i "s|raxmlHPC|raxml|g" Makefile
CFLAGS="$SLKCFLAGS" \
-make -f Makefile
+make -f Makefile -j1
install -D -m755 raxml $PKG/usr/bin/raxml
# Openmpi version
@@ -84,7 +94,7 @@ cp Makefile.MPI.gcc Makefile.MPI
sed -i "/^CFLAGS/s/=/+=/" Makefile.MPI
sed -i "s|raxmlHPC-MPI|raxml-MPI|g" Makefile.MPI
CFLAGS="$SLKCFLAGS" \
-make -f Makefile.MPI
+make -f Makefile.MPI -j1
install -D -m755 raxml-MPI $PKG/usr/bin/raxml-MPI
##########################################################################
@@ -152,4 +162,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/RepeatMasker/RepeatMasker.SlackBuild b/academic/RepeatMasker/RepeatMasker.SlackBuild
index 2975550e19..33c83c436d 100644
--- a/academic/RepeatMasker/RepeatMasker.SlackBuild
+++ b/academic/RepeatMasker/RepeatMasker.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for RepeatMasker
-# Copyright 2018-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2018-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,14 +22,25 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=RepeatMasker
-VERSION=${VERSION:-4.1.1}
+VERSION=${VERSION:-4.1.2_p1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ARCH=noarch
+SRCVER=4.1.2-p1
+
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
-CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -41,7 +52,7 @@ rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
rm -rf $PRGNAM
-tar xvf $CWD/$PRGNAM-$VERSION.tar.gz
+tar xvf $CWD/$PRGNAM-$SRCVER.tar.gz
cd $PRGNAM
chown -R root:root .
find -L . \
@@ -76,4 +87,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/RepeatMasker/RepeatMasker.info b/academic/RepeatMasker/RepeatMasker.info
index 322653dd70..e36cdaf964 100644
--- a/academic/RepeatMasker/RepeatMasker.info
+++ b/academic/RepeatMasker/RepeatMasker.info
@@ -1,8 +1,8 @@
PRGNAM="RepeatMasker"
-VERSION="4.1.1"
+VERSION="4.1.2_p1"
HOMEPAGE="http://www.repeatmasker.org/"
-DOWNLOAD="http://www.repeatmasker.org/RepeatMasker-4.1.1.tar.gz"
-MD5SUM="6df7b188757b5ef2d2575320eb0b014e"
+DOWNLOAD="http://www.repeatmasker.org/RepeatMasker/RepeatMasker-4.1.2-p1.tar.gz"
+MD5SUM="fbab50d0c467a9beca316020efc20ee4"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="perl-Text-Soundex trfind HMMER ncbi-rmblastn"
diff --git a/academic/STAR/STAR.SlackBuild b/academic/STAR/STAR.SlackBuild
index d785f46923..560a3b130e 100644
--- a/academic/STAR/STAR.SlackBuild
+++ b/academic/STAR/STAR.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for STAR
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=STAR
VERSION=${VERSION:-2.7.8a}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -99,4 +109,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/SU2/SU2.SlackBuild b/academic/SU2/SU2.SlackBuild
index a32beff5c2..ec10bbbfb3 100644
--- a/academic/SU2/SU2.SlackBuild
+++ b/academic/SU2/SU2.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for SU2
#
@@ -23,10 +23,13 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=SU2
VERSION=${VERSION:-6.2.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -104,4 +114,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/SeqMonk/README b/academic/SeqMonk/README
index a5d7990f84..cd6c3a9021 100644
--- a/academic/SeqMonk/README
+++ b/academic/SeqMonk/README
@@ -13,3 +13,5 @@ If you have any comments about SeqMonk the authors would like to hear
them. You either enter them in the bug tracking system at:
https://github.com/s-andrews/seqmonk/issues/
+
+NOTE: this comes with its own JAVA environment.
diff --git a/academic/SeqMonk/SeqMonk.SlackBuild b/academic/SeqMonk/SeqMonk.SlackBuild
index e09ee60c9a..10fa8efaef 100644
--- a/academic/SeqMonk/SeqMonk.SlackBuild
+++ b/academic/SeqMonk/SeqMonk.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for SeqMonk
-# Copyright 2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2020-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=SeqMonk
VERSION=${VERSION:-1.47.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
EXENAM=seqmonk
TARNAM=${EXENAM}_v${VERSION}_linux64
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -110,4 +120,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/Shark/Shark.SlackBuild b/academic/Shark/Shark.SlackBuild
index e8faee8c7f..4410930928 100644
--- a/academic/Shark/Shark.SlackBuild
+++ b/academic/Shark/Shark.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# SlackBuild script for Shark
-# Copyright 2018-2019 Benjamin Trigona-Harany <slackbuilds@jaxartes.net>
+# Copyright 2018-2021 Benjamin Trigona-Harany <slackbuilds@jaxartes.net>
# All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
@@ -24,10 +24,13 @@
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=Shark
-VERSION=${VERSION:-4.0.0}
+VERSION=${VERSION:-4.0.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -99,4 +109,4 @@ mkdir $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/Shark/Shark.info b/academic/Shark/Shark.info
index cae38a7659..0f5ef4ed9e 100644
--- a/academic/Shark/Shark.info
+++ b/academic/Shark/Shark.info
@@ -1,8 +1,8 @@
PRGNAM="Shark"
-VERSION="4.0.0"
+VERSION="4.0.1"
HOMEPAGE="http://image.diku.dk/shark"
-DOWNLOAD="https://github.com/Shark-ML/Shark/archive/v4.0.0/Shark-4.0.0.tar.gz"
-MD5SUM="a1c240bdbc0e4ad8ed09a855cc8e0444"
+DOWNLOAD="https://github.com/Shark-ML/Shark/archive/v4.0.1/Shark-4.0.1.tar.gz"
+MD5SUM="8278dd9444e0f48e661344eebc896990"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/TreeGraph/TreeGraph.SlackBuild b/academic/TreeGraph/TreeGraph.SlackBuild
index 1deeb4c780..f80eaedf9d 100644
--- a/academic/TreeGraph/TreeGraph.SlackBuild
+++ b/academic/TreeGraph/TreeGraph.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for TreeGraph
-# Copyright 2018-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2018-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,15 +22,25 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=TreeGraph
VERSION=${VERSION:-2.15.0_887_beta}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ZIPVER=2.15.0-887_beta
ARCH=noarch
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -77,4 +87,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/TreeGraph/TreeGraph.info b/academic/TreeGraph/TreeGraph.info
index 05ab5af79b..f1b09a32c3 100644
--- a/academic/TreeGraph/TreeGraph.info
+++ b/academic/TreeGraph/TreeGraph.info
@@ -5,6 +5,6 @@ DOWNLOAD="http://treegraph.bioinfweb.info/Download/Complete/TreeGraph_2.15.0-887
MD5SUM="4ca90fbb7cb7aae9a37d99ac742bd22f"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="jdk"
+REQUIRES="adoptopenjdk"
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/ViennaRNA/ViennaRNA.SlackBuild b/academic/ViennaRNA/ViennaRNA.SlackBuild
index 8bc20e2a45..2be3b9c248 100644
--- a/academic/ViennaRNA/ViennaRNA.SlackBuild
+++ b/academic/ViennaRNA/ViennaRNA.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ViennaRNA
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ViennaRNA
VERSION=${VERSION:-2.4.17}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -189,4 +199,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ViennaRNA/ViennaRNA.info b/academic/ViennaRNA/ViennaRNA.info
index 162b17f93a..24b106b9aa 100644
--- a/academic/ViennaRNA/ViennaRNA.info
+++ b/academic/ViennaRNA/ViennaRNA.info
@@ -5,6 +5,6 @@ DOWNLOAD="https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_4_x/ViennaRNA-2
MD5SUM="16bc4e1889c301b91985a3bac1f21e30"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="python3"
+REQUIRES=""
MAINTAINER="Rob van Nues"
EMAIL="sborg63@disroot.org"
diff --git a/academic/WEVOTE/WEVOTE.SlackBuild b/academic/WEVOTE/WEVOTE.SlackBuild
index c9090df979..54b285e704 100644
--- a/academic/WEVOTE/WEVOTE.SlackBuild
+++ b/academic/WEVOTE/WEVOTE.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for WEVOTE
-# Copyright 2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2018-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,11 +22,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=WEVOTE
VERSION=${VERSION:-1.8.0} # The version number is found in "install.sh"
COMMIT=645523db5aba843b2681e83146783b18e92866b1
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -102,4 +112,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/WordNet/WordNet.SlackBuild b/academic/WordNet/WordNet.SlackBuild
index 80105d9dfc..a33e6cff3d 100644
--- a/academic/WordNet/WordNet.SlackBuild
+++ b/academic/WordNet/WordNet.SlackBuild
@@ -1,14 +1,17 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for WordNet
# Written by Michael Gabilondo <mgabilo{at}gmail{dot}com>
# This work is in the public domain
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=WordNet
VERSION=${VERSION:-3.0}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -18,7 +21,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -88,4 +98,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/Xyce/Xyce.SlackBuild b/academic/Xyce/Xyce.SlackBuild
index 1363d6baeb..2b4a5c743c 100644
--- a/academic/Xyce/Xyce.SlackBuild
+++ b/academic/Xyce/Xyce.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Xyce
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=Xyce
VERSION=${VERSION:-6.5}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM="$PRGNAM"
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -118,4 +128,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ZeGrapher/ZeGrapher.SlackBuild b/academic/ZeGrapher/ZeGrapher.SlackBuild
index 2a79e3142e..05ccd50013 100644
--- a/academic/ZeGrapher/ZeGrapher.SlackBuild
+++ b/academic/ZeGrapher/ZeGrapher.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ZeGrapher
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ZeGrapher
VERSION=${VERSION:-3.0.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -88,4 +98,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ZeGrapher/ZeGrapher.info b/academic/ZeGrapher/ZeGrapher.info
index 44efd73a79..9ac639ea98 100644
--- a/academic/ZeGrapher/ZeGrapher.info
+++ b/academic/ZeGrapher/ZeGrapher.info
@@ -5,6 +5,6 @@ DOWNLOAD="https://github.com/AdelKS/ZeGrapher/archive/v3.0.2/ZeGrapher-3.0.2.tar
MD5SUM="a8440300bbf4d178e1469ebce1eb8403"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="qt5-webkit"
+REQUIRES=""
MAINTAINER="Fernando Lopez Jr."
EMAIL="fernando.lopezjr@gmail.com"
diff --git a/academic/abella/abella.SlackBuild b/academic/abella/abella.SlackBuild
index ea575be990..eb30ac337f 100644
--- a/academic/abella/abella.SlackBuild
+++ b/academic/abella/abella.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for abella
# Copyright 2019 Jefferson Rocha <root@slackjeff.com.br>
# All rights reserved.
@@ -21,12 +21,22 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#==========================VARS
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=abella
VERSION=${VERSION:-2.0.6}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ARCH=noarch
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -75,4 +85,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/abntex/abntex.SlackBuild b/academic/abntex/abntex.SlackBuild
index 743140f19a..ec4940e05f 100644
--- a/academic/abntex/abntex.SlackBuild
+++ b/academic/abntex/abntex.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for abntex
@@ -24,16 +24,26 @@
# Slightly modified by Robby Workman <rworkman@slackbuilds.org>
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=abntex
VERSION=${VERSION:-0.9_beta2}
ARCH=noarch
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
MAJOR=$(echo $VERSION | cut -d _ -f 1)
MINOR=$(echo $VERSION | cut -d _ -f 2)
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -81,4 +91,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/aenig4/aenig4.SlackBuild b/academic/aenig4/aenig4.SlackBuild
index 2a7705b76f..8e66aab54d 100644
--- a/academic/aenig4/aenig4.SlackBuild
+++ b/academic/aenig4/aenig4.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for aenig4
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=aenig4
VERSION=${VERSION:-1.04}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -98,4 +108,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/aline/README b/academic/aline/README
index 41b2e6e5ee..deba4d32ce 100644
--- a/academic/aline/README
+++ b/academic/aline/README
@@ -18,3 +18,4 @@ for more information and installation instructions if you want it.
CITING
Bond, C.S. and Schuttelkopf, A.W. (2009), Acta cryst. D65, 510-512
+https://crystal.scb.uwa.edu.au/charlie/software/aline/actad_65_510.pdf
diff --git a/academic/aline/aline.SlackBuild b/academic/aline/aline.SlackBuild
index 161ed68f3f..4a7ee98a35 100644
--- a/academic/aline/aline.SlackBuild
+++ b/academic/aline/aline.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for aline
-# Copyright 2013-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,15 +22,25 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=aline
VERSION=${VERSION:-1.0.025}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCVER=011208
ARCH=noarch
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -86,4 +96,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/aliview/aliview.SlackBuild b/academic/aliview/aliview.SlackBuild
index 89b70e0ceb..f3e5e9d0b7 100644
--- a/academic/aliview/aliview.SlackBuild
+++ b/academic/aliview/aliview.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for aliview
-# Copyright 2018-2019 Petar Petrov slackalaxy@gmail.com
+# Copyright 2018-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,12 +22,22 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=aliview
-VERSION=${VERSION:-1.26}
+VERSION=${VERSION:-1.27}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
+
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
-CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -74,4 +84,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/aliview/aliview.info b/academic/aliview/aliview.info
index 6f392759ae..d02ba7f9b8 100644
--- a/academic/aliview/aliview.info
+++ b/academic/aliview/aliview.info
@@ -1,10 +1,10 @@
PRGNAM="aliview"
-VERSION="1.26"
+VERSION="1.27"
HOMEPAGE="http://www.ormbunkar.se/aliview/"
-DOWNLOAD="http://www.ormbunkar.se/aliview/downloads/linux/linux-versions-all/linux-version-1.26/aliview.tgz"
-MD5SUM="9aac430a5f9e1cc465815cea0bf69af8"
+DOWNLOAD="http://www.ormbunkar.se/aliview/downloads/linux/linux-versions-all/linux-version-1.27/aliview.tgz"
+MD5SUM="5e16b3ce0a9680972f5a271e5d4ac6b9"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="jdk"
+REQUIRES="adoptopenjdk"
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/amd/amd.SlackBuild b/academic/amd/amd.SlackBuild
index 57645d2d25..b8c3a202cb 100644
--- a/academic/amd/amd.SlackBuild
+++ b/academic/amd/amd.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for AMD
@@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=amd
SRCNAM=SuiteSparse
SUBDIR=AMD
@@ -29,6 +31,7 @@ VERSION=${VERSION:-2.4.6}
SRCVER=${SRCVER:-5.8.1}
BUILD=${BUILD:-7}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -109,4 +119,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/amplicon/README b/academic/amplicon/README
index 395b56f031..de8c35014b 100644
--- a/academic/amplicon/README
+++ b/academic/amplicon/README
@@ -1,3 +1,15 @@
+Oligonucleotide (primer) design for polymerase chain reaction (PCR)
+experiments is an important stage in successfully obtaining desired PCR
+products (amplicons). PCR primer design may be assisted by software that
+helps the user assess features of the oligonucleotides that determine
+how they may interact with each other and with target and non-target DNA
+sequences in a solution. The design of PCR primers where multiple target
+sequences may be present in a solution is a difficult problem. This
+situation has not been extensively investigated and is difficult to
+address with software solutions, especially given a surprising lack of
+knowledge relating to Tm calculation of mismatched oligonucleotide and
+target sequences.
+
Amplicon is a tool for designing PCR primers where groups of related
DNA sequences can be assessed in aligned form. Other useful features
that are not common in other PCR primer design software are handling
@@ -5,6 +17,13 @@ of gapped sequences and degenerate sites in aligned DNA. Amplicon can
import aligned DNA sequences produced by Clustal, or aligned
sequences in MEGA or Fasta format.
+Amplicon can import aligned DNA sequences produced by ClustalW or
+ClustalX (Thompson et al., 1997); or aligned sequences in MEGA (Kumar et
+al., 1997) or Fasta format. Primer analyses can be saved to text files
+for editing in any text editor or word processor. Alignments that have
+been altered in Amplicon can be saved in Fasta, MEGA, .aln, PAUP
+(Swofford, 2003) or Phylip (Felsenstein, 1993) formats.
+
For details and citation:
Jarman SN (2004) Amplicon: software for designing PCR primers on
aligned DNA sequences. Bioinformatics 20: 1644-1645.
diff --git a/academic/amplicon/amplicon.SlackBuild b/academic/amplicon/amplicon.SlackBuild
index 0ab897e091..451c9779ec 100644
--- a/academic/amplicon/amplicon.SlackBuild
+++ b/academic/amplicon/amplicon.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for amplicon
-# Copyright 2011-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,14 +22,24 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=amplicon
VERSION=${VERSION:-b09.1}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ARCH=noarch
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -64,4 +74,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/amplifx/amplifx.SlackBuild b/academic/amplifx/amplifx.SlackBuild
index 5fa2210e3a..5c0887e412 100644
--- a/academic/amplifx/amplifx.SlackBuild
+++ b/academic/amplifx/amplifx.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for amplifx
-# Copyright 2015-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2015-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,15 +22,25 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=amplifx
SRCNAM=AmplifX_Lin_Latest
VERSION=${VERSION:-1.7.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ARCH=i386
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -72,4 +82,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/amplifx/amplifx.info b/academic/amplifx/amplifx.info
index b8e5894a9f..a1406f86c0 100644
--- a/academic/amplifx/amplifx.info
+++ b/academic/amplifx/amplifx.info
@@ -1,7 +1,7 @@
PRGNAM="amplifx"
VERSION="1.7.0"
HOMEPAGE="https://inp.univ-amu.fr/en/amplifx-manage-test-and-design-your-primers-for-pcr"
-DOWNLOAD="http://jim.inp.univ-amu.fr/IMG/zip/AmplifX_Lin_Latest.zip"
+DOWNLOAD="https://jim.inp.univ-amu.fr/IMG/zip/AmplifX_Lin_Latest.zip"
MD5SUM="ff84d1c4a800dcb651beaa877ff7b1ca"
DOWNLOAD_x86_64="UNSUPPORTED"
MD5SUM_x86_64=""
diff --git a/academic/antiprism/antiprism.SlackBuild b/academic/antiprism/antiprism.SlackBuild
index 271184a166..e17e282c7a 100644
--- a/academic/antiprism/antiprism.SlackBuild
+++ b/academic/antiprism/antiprism.SlackBuild
@@ -1,13 +1,16 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for antiprism
# Written by (Jorge Barros de Abreu) (ficmatin10 at gmail dot com)
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=antiprism
VERSION=${VERSION:-0.23}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -17,7 +20,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -55,7 +65,7 @@ find -L . \
sed "/^docdir/s|= .*|= @docdir@|" -i Makefile.in
CFLAGS="$SLKCFLAGS" \
-CXXFLAGS="$SLKCFLAGS" \
+CXXFLAGS="$SLKCFLAGS -fpermissive" \
./configure \
--prefix=/usr \
--libdir=/usr/lib$LIBDIRSUFFIX \
@@ -77,4 +87,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/archaeopteryx/archaeopteryx.SlackBuild b/academic/archaeopteryx/archaeopteryx.SlackBuild
index c72ba3b9e7..61b5da5a14 100644
--- a/academic/archaeopteryx/archaeopteryx.SlackBuild
+++ b/academic/archaeopteryx/archaeopteryx.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for archaeopteryx
-# Copyright 2014-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2014-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,16 +22,26 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=archaeopteryx
VERSION=${VERSION:-0.9928b}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=forester
SRCVER=1050
ARCH=noarch
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -61,4 +71,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/archaeopteryx/archaeopteryx.info b/academic/archaeopteryx/archaeopteryx.info
index 7bccba509a..798daf28ed 100644
--- a/academic/archaeopteryx/archaeopteryx.info
+++ b/academic/archaeopteryx/archaeopteryx.info
@@ -5,6 +5,6 @@ DOWNLOAD="http://www.phyloxml.org/download/forester/forester_1050.jar"
MD5SUM="023de2f0a48cbd236c5054fe839b1d72"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="jdk"
+REQUIRES="adoptopenjdk"
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/archaeopteryx/archaeopteryx.png b/academic/archaeopteryx/archaeopteryx.png
index 5663c1b87e..edb7bb66bc 100644
--- a/academic/archaeopteryx/archaeopteryx.png
+++ b/academic/archaeopteryx/archaeopteryx.png
Binary files differ
diff --git a/academic/aris/aris.SlackBuild b/academic/aris/aris.SlackBuild
index 4d0f2a04f2..05aee51aaa 100644
--- a/academic/aris/aris.SlackBuild
+++ b/academic/aris/aris.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for GNU aris
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=aris
VERSION=${VERSION:-2.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -94,4 +104,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/arka/arka.SlackBuild b/academic/arka/arka.SlackBuild
index eea4b48a41..75f7d2cd93 100644
--- a/academic/arka/arka.SlackBuild
+++ b/academic/arka/arka.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for arka
-# Copyright 2011-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,26 +22,36 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=arka
VERSION=${VERSION:-0.11}
-BUILD=${BUILD:-1}
+BUILD=${BUILD:-3}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
@@ -62,14 +72,16 @@ cd $TMP
rm -rf $PRGNAM-$VERSION
tar xvf $CWD/$PRGNAM-$VERSION.tgz
cd $PRGNAM-$VERSION
+
# Remove the pre-existing binary, just in case
rm arka
+
chown -R root:root .
find -L . \
- \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 -o -perm 511 \) \
- -exec chmod 755 {} \; -o \
- \( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \
- -exec chmod 644 {} \;
+ \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
+ -o -perm 511 \) -exec chmod 755 {} \; -o \
+ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
+ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
# A few path fixes to the Makefile, although it will work anyways.
sed "s:/usr/X11R6/bin:/usr/bin:" -i Makefile
@@ -81,8 +93,8 @@ sed "s:/usr/X11R6/include/X11/pixmaps:/usr/share/pixmaps:" -i Makefile
sed -i "/^CFLAGS/s/=/+=/" src/Makefile
# Fix for gcc-5.2.0 linker errors: add -fgnu89-inline
-CFLAGS="$SLKCFLAGS -fgnu89-inline" \
-CXXFLAGS="$SLKCFLAGS -fgnu89-inline" \
+CFLAGS="$SLKCFLAGS -fgnu89-inline -fcommon" \
+CXXFLAGS="$SLKCFLAGS -fgnu89-inline -fcommon" \
make
# The Makefile does not support "make DESTDIR install". So...
@@ -109,4 +121,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/armadillo/armadillo.SlackBuild b/academic/armadillo/armadillo.SlackBuild
index 2035220bdb..bd5f66da65 100644
--- a/academic/armadillo/armadillo.SlackBuild
+++ b/academic/armadillo/armadillo.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Armadillo
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=armadillo
VERSION=${VERSION:-8.100.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
DOCS="README.txt examples/ index.html LICENSE.txt docs.html rcpp_armadillo_csda_2014.pdf"
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -91,4 +101,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/arpack-ng/arpack-ng.SlackBuild b/academic/arpack-ng/arpack-ng.SlackBuild
index a86140d997..5e2a88456a 100644
--- a/academic/arpack-ng/arpack-ng.SlackBuild
+++ b/academic/arpack-ng/arpack-ng.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for arpack-ng
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=arpack-ng
VERSION=${VERSION:-3.8.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -103,4 +113,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/arpack/arpack.SlackBuild b/academic/arpack/arpack.SlackBuild
index d2d2e937c4..3c4efe07e2 100644
--- a/academic/arpack/arpack.SlackBuild
+++ b/academic/arpack/arpack.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for arpack
@@ -23,10 +23,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=arpack
VERSION=${VERSION:-2.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -115,4 +125,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/artha/artha.SlackBuild b/academic/artha/artha.SlackBuild
index 53eb0478d2..50e50e93e2 100644
--- a/academic/artha/artha.SlackBuild
+++ b/academic/artha/artha.SlackBuild
@@ -1,29 +1,39 @@
-#!/bin/sh
+#!/bin/bash
#
# Slackware build script for artha
#
# Written by Mikhail Zotov <mikhail dot ru at gmail dot com>
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=artha
-VERSION=${VERSION:-1.0.3}
+VERSION=${VERSION:-1.0.5}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
@@ -83,4 +93,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/artha/artha.info b/academic/artha/artha.info
index 1512888a8b..40037f5817 100644
--- a/academic/artha/artha.info
+++ b/academic/artha/artha.info
@@ -1,8 +1,8 @@
PRGNAM="artha"
-VERSION="1.0.3"
+VERSION="1.0.5"
HOMEPAGE="http://artha.sourceforge.net/"
-DOWNLOAD="http://ponce.cc/slackware/sources/repo/artha-1.0.3.tar.bz2"
-MD5SUM="9bc69f5666a1f494e21a0a0add9ebb16"
+DOWNLOAD="https://downloads.sourceforge.net/artha/artha-1.0.5.tar.bz2"
+MD5SUM="a916a7a943ac676a60f03cc839b04f37"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="WordNet"
diff --git a/academic/avl/avl.SlackBuild b/academic/avl/avl.SlackBuild
index 424ffaa5d1..ab88aed70d 100644
--- a/academic/avl/avl.SlackBuild
+++ b/academic/avl/avl.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for avl
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=avl
VERSION=${VERSION:-3.36}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -101,4 +111,4 @@ cp -a runs $PKG/usr/share/$PRGNAM
cp -a movie $PKG/usr/share/$PRGNAM
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/avogadro/avogadro.SlackBuild b/academic/avogadro/avogadro.SlackBuild
index 481347fe3c..ab79957b1a 100644
--- a/academic/avogadro/avogadro.SlackBuild
+++ b/academic/avogadro/avogadro.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Avogadro
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=avogadro
VERSION=${VERSION:-1.2.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -115,4 +125,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bcftools/bcftools.SlackBuild b/academic/bcftools/bcftools.SlackBuild
index 7a17a33d25..ccfd667c5d 100644
--- a/academic/bcftools/bcftools.SlackBuild
+++ b/academic/bcftools/bcftools.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for samtools
-# Copyright 2017-2020 Rob van Nues # All rights reserved.
+# Copyright 2017-2021 Rob van Nues # All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
# permitted provided that the following conditions are met:
@@ -22,10 +22,13 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-PRGNAM=bcftools
-VERSION=${VERSION:-1.11}
+cd $(dirname $0) ; CWD=$(pwd)
+
+PRGNAM=bcftools
+VERSION=${VERSION:-1.12}
BUILD=${BUILD:-1}
-TAG=${TAG:-_SBo}
+TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -107,4 +117,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bcftools/bcftools.info b/academic/bcftools/bcftools.info
index d181a29a4f..ad211ee207 100644
--- a/academic/bcftools/bcftools.info
+++ b/academic/bcftools/bcftools.info
@@ -1,8 +1,8 @@
PRGNAM="bcftools"
-VERSION="1.11"
+VERSION="1.12"
HOMEPAGE="http://www.htslib.org"
-DOWNLOAD="https://github.com/samtools/bcftools/releases/download/1.11/bcftools-1.11.tar.bz2"
-MD5SUM="58908e9280e2a3f2c309177a43dc09af"
+DOWNLOAD="https://github.com/samtools/bcftools/releases/download/1.12/bcftools-1.12.tar.bz2"
+MD5SUM="d3622cb3e52039055fd91ad65ea5131e"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="htslib"
diff --git a/academic/bedGraphToBigWig/bedGraphToBigWig.SlackBuild b/academic/bedGraphToBigWig/bedGraphToBigWig.SlackBuild
index b270b511bc..a360f96262 100644
--- a/academic/bedGraphToBigWig/bedGraphToBigWig.SlackBuild
+++ b/academic/bedGraphToBigWig/bedGraphToBigWig.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bedGraphToBigWig
-# Copyright 2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2016-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,20 +22,30 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bedGraphToBigWig
VERSION=${VERSION:-4}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -63,4 +73,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bedtools/bedtools.SlackBuild b/academic/bedtools/bedtools.SlackBuild
index c29f69d3e2..e514a8370f 100644
--- a/academic/bedtools/bedtools.SlackBuild
+++ b/academic/bedtools/bedtools.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bedtools
-# Copyright 2014-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2014-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,11 +22,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bedtools
DIRNAM=bedtools2
-VERSION=${VERSION:-2.29.2}
+VERSION=${VERSION:-2.30.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -94,4 +104,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bedtools/bedtools.info b/academic/bedtools/bedtools.info
index 79634be6cb..e1d978e114 100644
--- a/academic/bedtools/bedtools.info
+++ b/academic/bedtools/bedtools.info
@@ -1,8 +1,8 @@
PRGNAM="bedtools"
-VERSION="2.29.2"
+VERSION="2.30.0"
HOMEPAGE="http://bedtools.readthedocs.org/"
-DOWNLOAD="https://github.com/arq5x/bedtools2/releases/download/v2.29.2/bedtools-2.29.2.tar.gz"
-MD5SUM="a600f2cd58768310cb8427eb1ae54c17"
+DOWNLOAD="https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools-2.30.0.tar.gz"
+MD5SUM="6d89611900bceacb9883e51103e18ab8"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/biblesync/biblesync.SlackBuild b/academic/biblesync/biblesync.SlackBuild
index ffe9300400..f3820b5f67 100644
--- a/academic/biblesync/biblesync.SlackBuild
+++ b/academic/biblesync/biblesync.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for biblesync
@@ -30,10 +30,13 @@
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=biblesync
VERSION=${VERSION:-2.1.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -43,7 +46,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bibletime/bibletime.SlackBuild b/academic/bibletime/bibletime.SlackBuild
index 807cf266c2..c8e60c594f 100644
--- a/academic/bibletime/bibletime.SlackBuild
+++ b/academic/bibletime/bibletime.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# A slackbuild script to build the BibleTime Sword frontend
@@ -29,10 +29,13 @@
# Modified 2018/19/20 by Tim Dickson (dickson.tim@googlemail.com)
# Modified 20200918 by B. Watson <yalhcru@gmail.com>
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bibletime
VERSION=${VERSION:-3.0}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -42,7 +45,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bibletime/bibletime.info b/academic/bibletime/bibletime.info
index 43b5b02595..1cc0826cea 100644
--- a/academic/bibletime/bibletime.info
+++ b/academic/bibletime/bibletime.info
@@ -5,6 +5,6 @@ DOWNLOAD="https://github.com/bibletime/bibletime/releases/download/v3.0/bibletim
MD5SUM="c90bcafa7938ff0257a8599c3d9cb024"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="cmake-202x sword qt5 po4a fop"
+REQUIRES="sword po4a fop"
MAINTAINER="Tim Dickson"
EMAIL="dickson.tim@googlemail.com"
diff --git a/academic/bibus/bibus.SlackBuild b/academic/bibus/bibus.SlackBuild
index f00affaf8a..8ce9825499 100644
--- a/academic/bibus/bibus.SlackBuild
+++ b/academic/bibus/bibus.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bibus
@@ -27,13 +27,23 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bibus
VERSION=${VERSION:-1.5.2}
ARCH=noarch
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
+
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
-CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -82,4 +92,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/biopython/biopython.SlackBuild b/academic/biopython/biopython.SlackBuild
index 22bd291d1f..4fadf0ddd1 100644
--- a/academic/biopython/biopython.SlackBuild
+++ b/academic/biopython/biopython.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for biopython
-# Copyright 2019 Petar Petrov slackalaxy@gmail.com
+# Copyright 2019-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=biopython
-VERSION=${VERSION:-1.74}
+VERSION=${VERSION:-1.78}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -69,7 +79,9 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
-python setup.py install --root=$PKG
+if $(python3 -c 'import sys' 2>/dev/null); then
+ python3 setup.py install --root=$PKG
+fi
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
@@ -83,4 +95,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/biopython/biopython.info b/academic/biopython/biopython.info
index 9906f1df81..065965da62 100644
--- a/academic/biopython/biopython.info
+++ b/academic/biopython/biopython.info
@@ -1,8 +1,8 @@
PRGNAM="biopython"
-VERSION="1.74"
+VERSION="1.78"
HOMEPAGE="https://biopython.org/"
-DOWNLOAD="http://biopython.org/DIST/biopython-1.74.tar.gz"
-MD5SUM="cead2bfe9e7be45267eba00635f68d5c"
+DOWNLOAD="http://biopython.org/DIST/biopython-1.78.tar.gz"
+MD5SUM="acb2e70be7a002108659f1856c60b123"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="numpy"
diff --git a/academic/boinc/README b/academic/boinc/README
index f2130e2d19..35ab04a75a 100644
--- a/academic/boinc/README
+++ b/academic/boinc/README
@@ -12,7 +12,6 @@ Use the idle time on your computer (Windows, Mac, or Linux) to cure
diseases, study global warming, discover pulsars, and do many other
types of scientific research. It's safe, secure, and easy.
-
Building
(1) BOINC needs a static library for wxGTK3, compile with
@@ -29,10 +28,7 @@ to set the data directory in your user's home and build the package.
BOINCMGR=no ./boinc.SlackBuild
-then you do not need to install the dependencies (webp, webkit, wxGTK3).
-
-
-After installation
+then you do not need to install the dependencies (wxGTK3).
After installation you need to join a BOINC project:
http://boinc.berkeley.edu/projects.php
diff --git a/academic/boinc/boinc.SlackBuild b/academic/boinc/boinc.SlackBuild
index a456b96a97..83ffac3f80 100644
--- a/academic/boinc/boinc.SlackBuild
+++ b/academic/boinc/boinc.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for boinc
@@ -24,11 +24,15 @@
#
# TODO: add rc.boinc.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=boinc
-VERSION=${VERSION:-7.16.4}
+VERSION=${VERSION:-7.16.16}
BRANCH=${BRANCH:-7.16}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
+NUMJOBS=${NUMJOBS:-1}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -38,7 +42,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -99,7 +110,7 @@ CXXFLAGS="$SLKCFLAGS" \
--with-x \
--build=$ARCH-slackware-linux
-make
+make -j${NUMJOBS}
make install DESTDIR=$PKG
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
@@ -125,4 +136,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/boinc/boinc.info b/academic/boinc/boinc.info
index 8a3e9be145..f8f8fc215e 100644
--- a/academic/boinc/boinc.info
+++ b/academic/boinc/boinc.info
@@ -1,10 +1,10 @@
PRGNAM="boinc"
-VERSION="7.16.4"
+VERSION="7.16.16"
HOMEPAGE="https://boinc.berkeley.edu/"
-DOWNLOAD="https://github.com/BOINC/boinc/archive/client_release/7.16/7.16.4/boinc-client_release-7.16-7.16.4.tar.gz"
-MD5SUM="33aa0de75425d7c0b8acca0301df18b1"
+DOWNLOAD="https://github.com/BOINC/boinc/archive/client_release/7.16/7.16.16/boinc-client_release-7.16-7.16.16.tar.gz"
+MD5SUM="debf658ed8748c1c434c12f8a8a932a1"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="libwebp wxGTK3"
+REQUIRES="wxGTK3"
MAINTAINER="Edward W. Koenig"
-EMAIL="kingbeowulf@gmail.com"
+EMAIL="kingbeowulf@linuxgalaxy.org"
diff --git a/academic/bowtie/bowtie.SlackBuild b/academic/bowtie/bowtie.SlackBuild
index 0f5beae851..f9ba26ee43 100644
--- a/academic/bowtie/bowtie.SlackBuild
+++ b/academic/bowtie/bowtie.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bowtie
-# Copyright 2013-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,26 +22,36 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bowtie
-VERSION=${VERSION:-1.0.0}
+VERSION=${VERSION:-1.3.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
@@ -59,9 +69,9 @@ set -e
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
-rm -rf $PRGNAM-$VERSION
-tar xvf $CWD/${PRGNAM}_${VERSION}.orig.tar.gz
-cd $PRGNAM-$VERSION
+rm -rf $PRGNAM-$VERSION-src
+unzip $CWD/${PRGNAM}-${VERSION}-src.zip
+cd $PRGNAM-$VERSION-src
chown -R root:root .
find -L . \
\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
@@ -69,18 +79,13 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
-# Thanks to Debian for the set of patches!
-patch -p1 -i $CWD/patches/disable_bits_flag.patch
-patch -p1 -i $CWD/patches/no_hash_style_both_for_mips.patch
-patch -p1 -i $CWD/patches/seqan-fix-setBegin-call.patch
-patch -p1 -i $CWD/patches/use-dpkg-buildflags.patch
-
CFLAGS="$SLKCFLAGS" \
CXXFLAGS="$SLKCFLAGS" \
make
install -D -m755 $PRGNAM $PKG/usr/bin/$PRGNAM
install -D -m755 $PRGNAM-build $PKG/usr/bin/$PRGNAM-build
+install -D -m755 $PRGNAM-build-s $PKG/usr/bin/$PRGNAM-build-s
install -D -m755 $PRGNAM-inspect $PKG/usr/bin/$PRGNAM-inspect
# Copy genomic data, scripts and more
@@ -107,4 +112,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bowtie/bowtie.info b/academic/bowtie/bowtie.info
index 49d8c838cb..d3da6c5093 100644
--- a/academic/bowtie/bowtie.info
+++ b/academic/bowtie/bowtie.info
@@ -1,8 +1,8 @@
PRGNAM="bowtie"
-VERSION="1.0.0"
-HOMEPAGE="http://bowtie-bio.sourceforge.net/"
-DOWNLOAD="https://sourceforge.net/projects/sboppetrov/files/bowtie/bowtie_1.0.0.orig.tar.gz"
-MD5SUM="75d402c856b64958ec4bc0f67d011eb9"
+VERSION="1.3.0"
+HOMEPAGE="http://bowtie-bio.sourceforge.net/index.shtml"
+DOWNLOAD="https://sourceforge.net/projects/bowtie-bio/files/bowtie/1.3.0/bowtie-1.3.0-src.zip"
+MD5SUM="2055d1ab066a8f3f015bdffa26509335"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/bowtie2-legacy/bowtie2-legacy.SlackBuild b/academic/bowtie2-legacy/bowtie2-legacy.SlackBuild
index 882dd6040e..6055ae5246 100644
--- a/academic/bowtie2-legacy/bowtie2-legacy.SlackBuild
+++ b/academic/bowtie2-legacy/bowtie2-legacy.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bowtie2-legacy
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bowtie2-legacy
VERSION=${VERSION:-2.1.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=bowtie2
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -107,4 +117,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bowtie2/bowtie2.SlackBuild b/academic/bowtie2/bowtie2.SlackBuild
index fa8d2dfa04..585d914dd5 100644
--- a/academic/bowtie2/bowtie2.SlackBuild
+++ b/academic/bowtie2/bowtie2.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bowtie2
@@ -24,10 +24,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bowtie2
VERSION=${VERSION:-2.4.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -108,4 +118,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bowtie2/bowtie2.info b/academic/bowtie2/bowtie2.info
index c57cd185f3..f712462315 100644
--- a/academic/bowtie2/bowtie2.info
+++ b/academic/bowtie2/bowtie2.info
@@ -5,6 +5,6 @@ DOWNLOAD="https://github.com/BenLangmead/bowtie2/archive/v2.4.2/bowtie2-2.4.2.ta
MD5SUM="d5f8674aed8bdbf6b96bd07f3df528ee"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="tbb python3"
+REQUIRES="tbb"
MAINTAINER="Rob van Nues"
EMAIL="sborg63@disroot.org"
diff --git a/academic/bpp-core/bpp-core.SlackBuild b/academic/bpp-core/bpp-core.SlackBuild
index ab7439f63a..7199ab6ef5 100644
--- a/academic/bpp-core/bpp-core.SlackBuild
+++ b/academic/bpp-core/bpp-core.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bpp-core
-# Copyright 2017-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bpp-core
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -93,4 +103,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bpp-phyl-omics/bpp-phyl-omics.SlackBuild b/academic/bpp-phyl-omics/bpp-phyl-omics.SlackBuild
index 52411415e4..ab590a6ff9 100644
--- a/academic/bpp-phyl-omics/bpp-phyl-omics.SlackBuild
+++ b/academic/bpp-phyl-omics/bpp-phyl-omics.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bpp-phyl-omics
-# Copyright 2017-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bpp-phyl-omics
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -93,4 +103,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bpp-phyl/bpp-phyl.SlackBuild b/academic/bpp-phyl/bpp-phyl.SlackBuild
index 4666e9c966..5cae5d3670 100644
--- a/academic/bpp-phyl/bpp-phyl.SlackBuild
+++ b/academic/bpp-phyl/bpp-phyl.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bpp-phyl
-# Copyright 2017-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bpp-phyl
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -93,4 +103,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bpp-popgen/bpp-popgen.SlackBuild b/academic/bpp-popgen/bpp-popgen.SlackBuild
index b82387f45c..da35866122 100644
--- a/academic/bpp-popgen/bpp-popgen.SlackBuild
+++ b/academic/bpp-popgen/bpp-popgen.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bpp-popgen
-# Copyright 2017-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bpp-popgen
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -93,4 +103,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bpp-seq-omics/bpp-seq-omics.SlackBuild b/academic/bpp-seq-omics/bpp-seq-omics.SlackBuild
index 254bdc60da..0c91a9548b 100644
--- a/academic/bpp-seq-omics/bpp-seq-omics.SlackBuild
+++ b/academic/bpp-seq-omics/bpp-seq-omics.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bpp-seq-omics
-# Copyright 2017-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bpp-seq-omics
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -93,4 +103,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bpp-seq/bpp-seq.SlackBuild b/academic/bpp-seq/bpp-seq.SlackBuild
index 0239590a07..50f0a19f7c 100644
--- a/academic/bpp-seq/bpp-seq.SlackBuild
+++ b/academic/bpp-seq/bpp-seq.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bpp-seq
-# Copyright 2017-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bpp-seq
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -93,4 +103,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bpp1.9-numcalc/bpp1.9-numcalc.SlackBuild b/academic/bpp1.9-numcalc/bpp1.9-numcalc.SlackBuild
index 4c23467bad..220aed50d2 100644
--- a/academic/bpp1.9-numcalc/bpp1.9-numcalc.SlackBuild
+++ b/academic/bpp1.9-numcalc/bpp1.9-numcalc.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bpp1.9-utils
-# Copyright 2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2020-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,11 +22,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bpp1.9-numcalc
SRCNAM=bpp-numcalc
VERSION=${VERSION:-1.8.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -55,7 +65,7 @@ else
LIBDIRSUFFIX=""
fi
-# This is needed for vCAPS to find its libraries at runtime. Thanks Urachlay!
+# This is needed for vCAPS to find its libraries at runtime. Thanks Urchlay!
LIBDIRPATH="-Wl,-rpath,/usr/lib${LIBDIRSUFFIX}/Bpp1.9"
set -e
@@ -106,4 +116,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bpp1.9-phyl/bpp1.9-phyl.SlackBuild b/academic/bpp1.9-phyl/bpp1.9-phyl.SlackBuild
index f9caa0030c..94f338cef3 100644
--- a/academic/bpp1.9-phyl/bpp1.9-phyl.SlackBuild
+++ b/academic/bpp1.9-phyl/bpp1.9-phyl.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bpp1.9-phyl
-# Copyright 2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2020-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,11 +22,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bpp1.9-phyl
SRCNAM=bpp-phyl
VERSION=${VERSION:-1.9.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -110,4 +120,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bpp1.9-seq/bpp1.9-seq.SlackBuild b/academic/bpp1.9-seq/bpp1.9-seq.SlackBuild
index a35ba4e508..4d076f1a69 100644
--- a/academic/bpp1.9-seq/bpp1.9-seq.SlackBuild
+++ b/academic/bpp1.9-seq/bpp1.9-seq.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bpp1.9-seq
-# Copyright 2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2020-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,11 +22,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bpp1.9-seq
SRCNAM=bpp-seq
VERSION=${VERSION:-1.7.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -55,7 +65,7 @@ else
LIBDIRSUFFIX=""
fi
-# This is needed for vCAPS to find its libraries at runtime. Thanks Urachlay!
+# This is needed for vCAPS to find its libraries at runtime. Thanks Urchlay!
LIBDIRPATH="-Wl,-rpath,/usr/lib${LIBDIRSUFFIX}/Bpp1.9"
set -e
@@ -107,4 +117,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bpp1.9-utils/bpp1.9-utils.SlackBuild b/academic/bpp1.9-utils/bpp1.9-utils.SlackBuild
index daff8c88bf..f38058baff 100644
--- a/academic/bpp1.9-utils/bpp1.9-utils.SlackBuild
+++ b/academic/bpp1.9-utils/bpp1.9-utils.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bpp1.9-utils
-# Copyright 2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2020-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,11 +22,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bpp1.9-utils
SRCNAM=bpp-utils
VERSION=${VERSION:-1.5.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -55,7 +65,7 @@ else
LIBDIRSUFFIX=""
fi
-# This is needed for vCAPS to find its libraries at runtime. Thanks Urachlay!
+# This is needed for vCAPS to find its libraries at runtime. Thanks Urchlay!
LIBDIRPATH="-Wl,-rpath,/usr/lib${LIBDIRSUFFIX}/Bpp1.9"
set -e
@@ -111,4 +121,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bppsuite/bppsuite.SlackBuild b/academic/bppsuite/bppsuite.SlackBuild
index fba8911812..e8804980e6 100644
--- a/academic/bppsuite/bppsuite.SlackBuild
+++ b/academic/bppsuite/bppsuite.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bppsuite
-# Copyright 2017-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bppsuite
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -103,4 +113,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/btf/btf.SlackBuild b/academic/btf/btf.SlackBuild
index 619dcb650c..820d913277 100644
--- a/academic/btf/btf.SlackBuild
+++ b/academic/btf/btf.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for BTF
@@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=btf
SRCNAM=SuiteSparse
SUBDIR=BTF
@@ -29,6 +31,7 @@ VERSION=${VERSION:-1.2.6}
SRCVER=${SRCVER:-5.8.1}
BUILD=${BUILD:-7}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/bwa/bwa.SlackBuild b/academic/bwa/bwa.SlackBuild
index 7b5fc48a08..0f38e66b24 100644
--- a/academic/bwa/bwa.SlackBuild
+++ b/academic/bwa/bwa.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for bwa
-# Copyright 2013-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=bwa
VERSION=${VERSION:-0.7.17}
-BUILD=${BUILD:-1}
+BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -73,7 +83,7 @@ find -L . \
sed -i "/^C.*.*FLAGS/s/=/+=/" Makefile
# Thanks to Willy for the -msse2 fix!
-CFLAGS="$SLKCFLAGS -msse2" \
+CFLAGS="$SLKCFLAGS -msse2 -fcommon" \
CXXFLAGS="$SLKCFLAGS" \
make
@@ -98,4 +108,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cadabra2/cadabra2.SlackBuild b/academic/cadabra2/cadabra2.SlackBuild
index f6a618c3ff..9a4d96a6dd 100644
--- a/academic/cadabra2/cadabra2.SlackBuild
+++ b/academic/cadabra2/cadabra2.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for cadabra2
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cadabra2
VERSION=${VERSION:-2.3.6.3}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
MMA=${MMA:-OFF}
if [ -z "$ARCH" ]; then
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -122,4 +132,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cadabra2/cadabra2.info b/academic/cadabra2/cadabra2.info
index 164ad63867..99e6eff0c1 100644
--- a/academic/cadabra2/cadabra2.info
+++ b/academic/cadabra2/cadabra2.info
@@ -5,6 +5,6 @@ DOWNLOAD="https://downloads.sourceforge.net/slackbuildsdirectlinks/cadabra2/cada
MD5SUM="9e792260d2b6dea2bb7c5d8a0a627662"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="python3-matplotlib python3-gmpy2 python3-sympy jsoncpp cmake-202x"
+REQUIRES="python3-matplotlib python3-gmpy2 python3-sympy jsoncpp"
MAINTAINER="Alexander Verbovetsky"
EMAIL="alik@ejik.org"
diff --git a/academic/calc/calc.SlackBuild b/academic/calc/calc.SlackBuild
index 043faff559..b53906a3be 100644
--- a/academic/calc/calc.SlackBuild
+++ b/academic/calc/calc.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for calc
# Copyright 2017 Dhaby Xiloj <slack.dhabyx@gmail.com>
@@ -23,10 +23,13 @@
# Modified by Robby Workman <rworkman@slackbuilds.org>
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=calc
-VERSION=${VERSION:-2.12.7.2}
+VERSION=${VERSION:-2.12.9.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/calc/calc.info b/academic/calc/calc.info
index a14bf23ea6..7aa20d8a72 100644
--- a/academic/calc/calc.info
+++ b/academic/calc/calc.info
@@ -1,8 +1,8 @@
PRGNAM="calc"
-VERSION="2.12.7.2"
+VERSION="2.12.9.1"
HOMEPAGE="http://www.isthe.com/chongo/tech/comp/calc/"
-DOWNLOAD="http://www.isthe.com/chongo/src/calc/calc-2.12.7.2.tar.bz2"
-MD5SUM="86ba447318108da52e4d9ab93e00aca9"
+DOWNLOAD="http://www.isthe.com/chongo/src/calc/calc-2.12.9.1.tar.bz2"
+MD5SUM="e4abaecede9a9794474f3531550668f4"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/calcoo/calcoo.SlackBuild b/academic/calcoo/calcoo.SlackBuild
index 29a8d1a067..9083c396ba 100644
--- a/academic/calcoo/calcoo.SlackBuild
+++ b/academic/calcoo/calcoo.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for calcoo
-# Copyright 2006-2013 Robby Workman, Northport, Alabama, USA
+# Copyright 2006-2013,2021 Robby Workman, Tuscaloosa, Alabama, USA
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,14 +22,24 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=calcoo
VERSION=${VERSION:-2.1.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ARCH=noarch
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -54,4 +64,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/camd/camd.SlackBuild b/academic/camd/camd.SlackBuild
index b7253a1aba..3b4c52de11 100644
--- a/academic/camd/camd.SlackBuild
+++ b/academic/camd/camd.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for CAMD
@@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=camd
SRCNAM=SuiteSparse
SUBDIR=CAMD
@@ -29,6 +31,7 @@ VERSION=${VERSION:-2.4.6}
SRCVER=${SRCVER:-5.8.1}
BUILD=${BUILD:-7}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -108,4 +118,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cap3/cap3.SlackBuild b/academic/cap3/cap3.SlackBuild
index 12ee761b1e..2229bdd2d6 100644
--- a/academic/cap3/cap3.SlackBuild
+++ b/academic/cap3/cap3.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for cap3
-# Copyright 2013-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cap3
VERSION=${VERSION:-20091029} # Use the last modification date as version
-BUILD=${BUILD:-1}
+BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -49,7 +59,7 @@ fi
# Determine the tarball arch
if [ "$ARCH" = "x86_64" ]; then
- SRCARCH=".opteron64"
+ SRCARCH=".x86_64"
else
SRCARCH=""
fi
@@ -89,4 +99,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cap3/cap3.info b/academic/cap3/cap3.info
index d72fab6233..0ac9937cbe 100644
--- a/academic/cap3/cap3.info
+++ b/academic/cap3/cap3.info
@@ -3,8 +3,8 @@ VERSION="20091029"
HOMEPAGE="http://seq.cs.iastate.edu/"
DOWNLOAD="http://seq.cs.iastate.edu/CAP3/cap3.linux.tar"
MD5SUM="55f57f61e588d4de06c0506cf2696c29"
-DOWNLOAD_x86_64="http://seq.cs.iastate.edu/CAP3/cap3.linux.opteron64.tar"
-MD5SUM_x86_64="2d924766f6e8b5cf03bd2db81016d821"
+DOWNLOAD_x86_64="http://seq.cs.iastate.edu/CAP3/cap3.linux.x86_64.tar"
+MD5SUM_x86_64="5393d937978ecc5f18fcb741140e1f02"
REQUIRES=""
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/cblas/cblas.SlackBuild b/academic/cblas/cblas.SlackBuild
index a7cadea464..a92711ab77 100644
--- a/academic/cblas/cblas.SlackBuild
+++ b/academic/cblas/cblas.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for CBLAS
-# Copyright 2016-2020 Kyle Guinn <elyk03@gmail.com>
+# Copyright 2016-2021 Kyle Guinn <elyk03@gmail.com>
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,11 +22,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cblas
SRCNAM=lapack
-VERSION=${VERSION:-3.9.0}
+VERSION=${VERSION:-3.9.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -118,4 +128,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cblas/cblas.info b/academic/cblas/cblas.info
index 06128f1f4e..7821e1a648 100644
--- a/academic/cblas/cblas.info
+++ b/academic/cblas/cblas.info
@@ -1,8 +1,8 @@
PRGNAM="cblas"
-VERSION="3.9.0"
+VERSION="3.9.1"
HOMEPAGE="https://www.netlib.org/blas/"
-DOWNLOAD="https://github.com/Reference-LAPACK/lapack/archive/v3.9.0/lapack-3.9.0.tar.gz"
-MD5SUM="0b251e2a8d5f949f99b50dd5e2200ee2"
+DOWNLOAD="https://github.com/Reference-LAPACK/lapack/archive/v3.9.1/lapack-3.9.1.tar.gz"
+MD5SUM="47ab2d11652045145df37ddbe2a32d71"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="blas"
diff --git a/academic/cblas/patches/cmake-piecewise.diff b/academic/cblas/patches/cmake-piecewise.diff
index b1bdfaec1e..378acc8769 100644
--- a/academic/cblas/patches/cmake-piecewise.diff
+++ b/academic/cblas/patches/cmake-piecewise.diff
@@ -5,25 +5,25 @@ diff --git a/CBLAS/CMakeLists.txt b/CBLAS/CMakeLists.txt
message(STATUS "CBLAS enable")
enable_language(C)
--set(LAPACK_INSTALL_EXPORT_NAME cblas-targets)
+-set(LAPACK_INSTALL_EXPORT_NAME ${CBLASLIB}-targets)
-
# Create a header file cblas.h for the routines called in my C programs
include(FortranCInterface)
## Ensure that the fortran compiler and c compiler specified are compatible
-@@ -41,54 +39,8 @@
+@@ -45,54 +43,8 @@
add_subdirectory(examples)
endif()
-if(NOT BLAS_FOUND)
-- set(ALL_TARGETS ${ALL_TARGETS} blas)
+- set(ALL_TARGETS ${ALL_TARGETS} ${BLASLIB})
-endif()
-
-# Export cblas targets from the
-# install tree, if any.
-set(_cblas_config_install_guard_target "")
-if(ALL_TARGETS)
-- install(EXPORT cblas-targets
-- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/cblas-${LAPACK_VERSION}
+- install(EXPORT ${CBLASLIB}-targets
+- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${CBLASLIB}-${LAPACK_VERSION}
- COMPONENT Development
- )
- # Choose one of the cblas targets to use as a guard for
@@ -34,7 +34,7 @@ diff --git a/CBLAS/CMakeLists.txt b/CBLAS/CMakeLists.txt
-# Export cblas targets from the build tree, if any.
-set(_cblas_config_build_guard_target "")
-if(ALL_TARGETS)
-- export(TARGETS ${ALL_TARGETS} FILE cblas-targets.cmake)
+- export(TARGETS ${ALL_TARGETS} FILE ${CBLASLIB}-targets.cmake)
-
- # Choose one of the cblas targets to use as a guard
- # for cblas-config.cmake to load targets from the build tree.
@@ -42,27 +42,27 @@ diff --git a/CBLAS/CMakeLists.txt b/CBLAS/CMakeLists.txt
-endif()
-
-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cmake/cblas-config-version.cmake.in
-- ${LAPACK_BINARY_DIR}/cblas-config-version.cmake @ONLY)
+- ${LAPACK_BINARY_DIR}/${CBLASLIB}-config-version.cmake @ONLY)
-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cmake/cblas-config-build.cmake.in
-- ${LAPACK_BINARY_DIR}/cblas-config.cmake @ONLY)
+- ${LAPACK_BINARY_DIR}/${CBLASLIB}-config.cmake @ONLY)
-
-
- configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cblas.pc.in ${CMAKE_CURRENT_BINARY_DIR}/cblas.pc @ONLY)
+ configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cblas.pc.in ${CMAKE_CURRENT_BINARY_DIR}/${CBLASLIB}.pc @ONLY)
install(FILES
- ${CMAKE_CURRENT_BINARY_DIR}/cblas.pc
+ ${CMAKE_CURRENT_BINARY_DIR}/${CBLASLIB}.pc
DESTINATION ${PKG_CONFIG_DIR}
)
-
-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cmake/cblas-config-install.cmake.in
-- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/cblas-config.cmake @ONLY)
+- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/${CBLASLIB}-config.cmake @ONLY)
-install(FILES
-- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/cblas-config.cmake
-- ${LAPACK_BINARY_DIR}/cblas-config-version.cmake
-- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/cblas-${LAPACK_VERSION}
+- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/${CBLASLIB}-config.cmake
+- ${LAPACK_BINARY_DIR}/${CBLASLIB}-config-version.cmake
+- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${CBLASLIB}-${LAPACK_VERSION}
- )
-
--#install(EXPORT cblas-targets
--# DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/cblas-${LAPACK_VERSION}
+-#install(EXPORT ${CBLASLIB}-targets
+-# DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${CBLASLIB}-${LAPACK_VERSION}
-# COMPONENT Development
-# )
diff --git a/CBLAS/cmake/cblas-config-build.cmake.in b/CBLAS/cmake/cblas-config-build.cmake.in
@@ -76,14 +76,14 @@ deleted file mode 100644
-
-# Load lapack targets from the build tree, including lapacke targets.
-if(NOT TARGET lapacke)
-- include("@LAPACK_BINARY_DIR@/lapack-targets.cmake")
+- include("@LAPACK_BINARY_DIR@/@LAPACKLIB@-targets.cmake")
-endif()
-
-# Report cblas header search locations from build tree.
-set(CBLAS_INCLUDE_DIRS "@LAPACK_BINARY_DIR@/include")
-
-# Report cblas libraries.
--set(CBLAS_LIBRARIES cblas)
+-set(CBLAS_LIBRARIES @CBLASLIB@)
diff --git a/CBLAS/cmake/cblas-config-install.cmake.in b/CBLAS/cmake/cblas-config-install.cmake.in
deleted file mode 100644
--- a/CBLAS/cmake/cblas-config-install.cmake.in
@@ -96,19 +96,19 @@ deleted file mode 100644
-get_filename_component(_CBLAS_PREFIX "${_CBLAS_PREFIX}" PATH)
-
-# Load the LAPACK package with which we were built.
--set(LAPACK_DIR "${_CBLAS_PREFIX}/@CMAKE_INSTALL_LIBDIR@/cmake/lapack-@LAPACK_VERSION@")
+-set(LAPACK_DIR "${_CBLAS_PREFIX}/@CMAKE_INSTALL_LIBDIR@/cmake/@LAPACKLIB@-@LAPACK_VERSION@")
-find_package(LAPACK NO_MODULE)
-
-# Load lapacke targets from the install tree.
--if(NOT TARGET cblas)
-- include(${_CBLAS_SELF_DIR}/cblas-targets.cmake)
+-if(NOT TARGET @CBLASLIB@)
+- include(${_CBLAS_SELF_DIR}/@CBLASLIB@-targets.cmake)
-endif()
-
-# Report lapacke header search locations.
-set(CBLAS_INCLUDE_DIRS ${_CBLAS_PREFIX}/include)
-
-# Report lapacke libraries.
--set(CBLAS_LIBRARIES cblas)
+-set(CBLAS_LIBRARIES @CBLASLIB@)
-
-unset(_CBLAS_PREFIX)
-unset(_CBLAS_SELF_DIR)
@@ -128,16 +128,16 @@ deleted file mode 100644
diff --git a/CBLAS/src/CMakeLists.txt b/CBLAS/src/CMakeLists.txt
--- a/CBLAS/src/CMakeLists.txt
+++ b/CBLAS/src/CMakeLists.txt
-@@ -120,9 +120,5 @@
- VERSION ${LAPACK_VERSION}
- SOVERSION ${LAPACK_MAJOR_VERSION}
- )
--target_include_directories(cblas PUBLIC
+@@ -123,9 +123,5 @@
+ if(HAS_ATTRIBUTE_WEAK_SUPPORT)
+ target_compile_definitions(${CBLASLIB} PRIVATE HAS_ATTRIBUTE_WEAK_SUPPORT)
+ endif()
+-target_include_directories(${CBLASLIB} PUBLIC
- $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/../include>
- $<INSTALL_INTERFACE:include>
-)
- target_link_libraries(cblas PRIVATE ${BLAS_LIBRARIES})
- lapack_install_library(cblas)
+ target_link_libraries(${CBLASLIB} PRIVATE ${BLAS_LIBRARIES})
+ lapack_install_library(${CBLASLIB})
diff --git a/CMAKE/lapack-config-build.cmake.in b/CMAKE/lapack-config-build.cmake.in
deleted file mode 100644
--- a/CMAKE/lapack-config-build.cmake.in
@@ -146,7 +146,7 @@ deleted file mode 100644
-# Load lapack targets from the build tree if necessary.
-set(_LAPACK_TARGET "@_lapack_config_build_guard_target@")
-if(_LAPACK_TARGET AND NOT TARGET "${_LAPACK_TARGET}")
-- include("@LAPACK_BINARY_DIR@/lapack-targets.cmake")
+- include("@LAPACK_BINARY_DIR@/@LAPACKLIB@-targets.cmake")
-endif()
-unset(_LAPACK_TARGET)
-
@@ -168,7 +168,7 @@ deleted file mode 100644
-# Load lapack targets from the install tree if necessary.
-set(_LAPACK_TARGET "@_lapack_config_install_guard_target@")
-if(_LAPACK_TARGET AND NOT TARGET "${_LAPACK_TARGET}")
-- include("${_LAPACK_SELF_DIR}/lapack-targets.cmake")
+- include("${_LAPACK_SELF_DIR}/@LAPACKLIB@-targets.cmake")
-endif()
-unset(_LAPACK_TARGET)
-
@@ -184,11 +184,11 @@ deleted file mode 100644
diff --git a/CMakeLists.txt b/CMakeLists.txt
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
-@@ -112,11 +112,8 @@
+@@ -160,11 +160,8 @@
# --------------------------------------------------
--set(LAPACK_INSTALL_EXPORT_NAME lapack-targets)
+-set(LAPACK_INSTALL_EXPORT_NAME ${LAPACKLIB}-targets)
-
macro(lapack_install_library lib)
install(TARGETS ${lib}
@@ -196,7 +196,7 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
ARCHIVE DESTINATION ${CMAKE_INSTALL_LIBDIR} COMPONENT Development
LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR} COMPONENT RuntimeLibraries
RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR} COMPONENT RuntimeLibraries
-@@ -155,21 +152,6 @@
+@@ -204,21 +201,6 @@
include(CheckLAPACKCompilerFlags)
CheckLAPACKCompilerFlags()
@@ -204,7 +204,7 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
-# Check second function
-
-include(CheckTimeFunction)
--set(TIME_FUNC NONE ${TIME_FUNC})
+-set(NONE ${TIME_FUNC})
-CHECK_TIME_FUNCTION(NONE TIME_FUNC)
-CHECK_TIME_FUNCTION(INT_CPU_TIME TIME_FUNC)
-CHECK_TIME_FUNCTION(EXT_ETIME TIME_FUNC)
@@ -218,7 +218,7 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
# deprecated LAPACK and LAPACKE routines
option(BUILD_DEPRECATED "Build deprecated routines" OFF)
message(STATUS "Build deprecated routines: ${BUILD_DEPRECATED}")
-@@ -193,8 +175,9 @@
+@@ -242,8 +224,9 @@
endif()
# --------------------------------------------------
@@ -229,7 +229,7 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
# Check the usage of the user provided BLAS libraries
if(BLAS_LIBRARIES)
-@@ -205,113 +188,108 @@
+@@ -254,113 +237,108 @@
if(BLAS_FOUND)
message(STATUS "--> BLAS supplied by user is WORKING, will use ${BLAS_LIBRARIES}.")
else()
@@ -250,7 +250,7 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
- message(STATUS "Using supplied NETLIB BLAS implementation")
- add_subdirectory(BLAS)
+elseif(BUILD_BLAS)
- set(BLAS_LIBRARIES blas)
+ set(BLAS_LIBRARIES ${BLASLIB})
-else()
- set(CMAKE_EXE_LINKER_FLAGS
- "${CMAKE_EXE_LINKER_FLAGS} ${BLAS_LINKER_FLAGS}"
@@ -326,14 +326,14 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
+ find_package(LAPACK)
+
+elseif(BUILD_LAPACK)
- set(LAPACK_LIBRARIES lapack)
+ set(LAPACK_LIBRARIES ${LAPACKLIB})
+ set(LAPACK_FOUND TRUE)
+
+ set(NEED_BLAS TRUE)
+
+ # Check second function
+ include(CheckTimeFunction)
-+ set(TIME_FUNC NONE ${TIME_FUNC})
++ set(NONE ${TIME_FUNC})
+ CHECK_TIME_FUNCTION(NONE TIME_FUNC)
+ CHECK_TIME_FUNCTION(INT_CPU_TIME TIME_FUNC)
+ CHECK_TIME_FUNCTION(EXT_ETIME TIME_FUNC)
@@ -363,9 +363,9 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
+ add_subdirectory(TESTING)
+ endif()
+
-+ configure_file(${CMAKE_CURRENT_SOURCE_DIR}/lapack.pc.in ${CMAKE_CURRENT_BINARY_DIR}/lapack.pc @ONLY)
++ configure_file(${CMAKE_CURRENT_SOURCE_DIR}/lapack.pc.in ${CMAKE_CURRENT_BINARY_DIR}/${LAPACKLIB}.pc @ONLY)
+ install(FILES
-+ ${CMAKE_CURRENT_BINARY_DIR}/lapack.pc
++ ${CMAKE_CURRENT_BINARY_DIR}/${LAPACKLIB}.pc
+ DESTINATION ${PKG_CONFIG_DIR}
+ COMPONENT Development
+ )
@@ -393,8 +393,8 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
add_subdirectory(LAPACKE)
endif()
-@@ -338,109 +316,12 @@
- _display_cpp_implementation_msg("LAPACK")
+@@ -414,111 +392,16 @@
+ ExternalProject_Add_StepDependencies(lapackpp build blaspp ${BLAS_LIBRARIES} ${LAPACK_LIBRARIES})
endif()
-# --------------------------------------------------
@@ -430,23 +430,23 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
-# --------------------------------------------------
-
-if(NOT BLAS_FOUND)
-- set(ALL_TARGETS ${ALL_TARGETS} blas)
+- set(ALL_TARGETS ${ALL_TARGETS} ${BLASLIB})
-endif()
-
-if(NOT LATESTLAPACK_FOUND)
-- set(ALL_TARGETS ${ALL_TARGETS} lapack)
+- set(ALL_TARGETS ${ALL_TARGETS} ${LAPACKLIB})
-endif()
-
-if(BUILD_TESTING OR LAPACKE_WITH_TMG)
-- set(ALL_TARGETS ${ALL_TARGETS} tmglib)
+- set(ALL_TARGETS ${ALL_TARGETS} ${TMGLIB})
-endif()
-
-# Export lapack targets, not including lapacke, from the
-# install tree, if any.
-set(_lapack_config_install_guard_target "")
-if(ALL_TARGETS)
-- install(EXPORT lapack-targets
-- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/lapack-${LAPACK_VERSION}
+- install(EXPORT ${LAPACKLIB}-targets
+- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${LAPACKLIB}-${LAPACK_VERSION}
- COMPONENT Development
- )
-
@@ -457,12 +457,12 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
-
-# Include cblas in targets exported from the build tree.
-if(CBLAS)
-- set(ALL_TARGETS ${ALL_TARGETS} cblas)
+- set(ALL_TARGETS ${ALL_TARGETS} ${CBLASLIB})
-endif()
-
-# Include lapacke in targets exported from the build tree.
-if(LAPACKE)
-- set(ALL_TARGETS ${ALL_TARGETS} lapacke)
+- set(ALL_TARGETS ${ALL_TARGETS} ${LAPACKELIB})
+# Neither user specified or optimized BLAS libraries can be used
+if(NEED_BLAS AND NOT BLAS_FOUND)
+ message(FATAL_ERROR "--> No BLAS library found. Specify BLAS_LIBRARIES or enable USE_OPTIMIZED_BLAS or BUILD_BLAS.")
@@ -471,7 +471,7 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
-# Export lapack and lapacke targets from the build tree, if any.
-set(_lapack_config_build_guard_target "")
-if(ALL_TARGETS)
-- export(TARGETS ${ALL_TARGETS} FILE lapack-targets.cmake)
+- export(TARGETS ${ALL_TARGETS} FILE ${LAPACKLIB}-targets.cmake)
-
- # Choose one of the lapack or lapacke targets to use as a guard
- # for lapack-config.cmake to load targets from the build tree.
@@ -480,36 +480,37 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
+if(NEED_LAPACK AND NOT LAPACK_FOUND)
+ message(FATAL_ERROR "--> No LAPACK library found. Specify LAPACK_LIBRARIES or enable USE_OPTIMIZED_LAPACK or BUILD_LAPACK.")
endif()
--
+
-configure_file(${LAPACK_SOURCE_DIR}/CMAKE/lapack-config-build.cmake.in
-- ${LAPACK_BINARY_DIR}/lapack-config.cmake @ONLY)
+- ${LAPACK_BINARY_DIR}/${LAPACKLIB}-config.cmake @ONLY)
-
-
--configure_file(${CMAKE_CURRENT_SOURCE_DIR}/lapack.pc.in ${CMAKE_CURRENT_BINARY_DIR}/lapack.pc @ONLY)
+-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/lapack.pc.in ${CMAKE_CURRENT_BINARY_DIR}/${LAPACKLIB}.pc @ONLY)
- install(FILES
-- ${CMAKE_CURRENT_BINARY_DIR}/lapack.pc
+- ${CMAKE_CURRENT_BINARY_DIR}/${LAPACKLIB}.pc
- DESTINATION ${PKG_CONFIG_DIR}
- COMPONENT Development
- )
-
-configure_file(${LAPACK_SOURCE_DIR}/CMAKE/lapack-config-install.cmake.in
-- ${LAPACK_BINARY_DIR}/CMakeFiles/lapack-config.cmake @ONLY)
+- ${LAPACK_BINARY_DIR}/CMakeFiles/${LAPACKLIB}-config.cmake @ONLY)
-
-include(CMakePackageConfigHelpers)
-write_basic_package_version_file(
-- ${LAPACK_BINARY_DIR}/lapack-config-version.cmake
+- ${LAPACK_BINARY_DIR}/${LAPACKLIB}-config-version.cmake
- VERSION ${LAPACK_VERSION}
- COMPATIBILITY SameMajorVersion
- )
-
-install(FILES
-- ${LAPACK_BINARY_DIR}/CMakeFiles/lapack-config.cmake
-- ${LAPACK_BINARY_DIR}/lapack-config-version.cmake
-- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/lapack-${LAPACK_VERSION}
+- ${LAPACK_BINARY_DIR}/CMakeFiles/${LAPACKLIB}-config.cmake
+- ${LAPACK_BINARY_DIR}/${LAPACKLIB}-config-version.cmake
+- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${LAPACKLIB}-${LAPACK_VERSION}
- COMPONENT Development
- )
--
-\ No newline at end of file
+ if (LAPACK++)
+ install(
+ DIRECTORY "${LAPACK_BINARY_DIR}/lib/"
diff --git a/LAPACKE/CMakeLists.txt b/LAPACKE/CMakeLists.txt
--- a/LAPACKE/CMakeLists.txt
+++ b/LAPACKE/CMakeLists.txt
@@ -517,7 +518,7 @@ diff --git a/LAPACKE/CMakeLists.txt b/LAPACKE/CMakeLists.txt
message(STATUS "LAPACKE enable")
enable_language(C)
--set(LAPACK_INSTALL_EXPORT_NAME lapacke-targets)
+-set(LAPACK_INSTALL_EXPORT_NAME ${LAPACKELIB}-targets)
-
# Create a header file lapacke_mangling.h for the routines called in my C programs
include(FortranCInterface)
@@ -526,38 +527,38 @@ diff --git a/LAPACKE/CMakeLists.txt b/LAPACKE/CMakeLists.txt
VERSION ${LAPACK_VERSION}
SOVERSION ${LAPACK_MAJOR_VERSION}
)
--target_include_directories(lapacke PUBLIC
+-target_include_directories(${LAPACKELIB} PUBLIC
- $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/include>
- $<INSTALL_INTERFACE:include>
-)
-if(WIN32 AND NOT UNIX)
-- target_compile_definitions(lapacke PUBLIC HAVE_LAPACK_CONFIG_H LAPACK_COMPLEX_STRUCTURE)
+- target_compile_definitions(${LAPACKELIB} PUBLIC HAVE_LAPACK_CONFIG_H LAPACK_COMPLEX_STRUCTURE)
- message(STATUS "Windows BUILD")
-endif()
if(LAPACKE_WITH_TMG)
- target_link_libraries(lapacke PRIVATE tmglib)
+ target_link_libraries(${LAPACKELIB} PRIVATE ${TMGLIB})
@@ -111,22 +101,3 @@
DESTINATION ${PKG_CONFIG_DIR}
COMPONENT Development
)
-
-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cmake/lapacke-config-version.cmake.in
-- ${LAPACK_BINARY_DIR}/lapacke-config-version.cmake @ONLY)
+- ${LAPACK_BINARY_DIR}/${LAPACKELIB}-config-version.cmake @ONLY)
-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cmake/lapacke-config-build.cmake.in
-- ${LAPACK_BINARY_DIR}/lapacke-config.cmake @ONLY)
+- ${LAPACK_BINARY_DIR}/${LAPACKELIB}-config.cmake @ONLY)
-
-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cmake/lapacke-config-install.cmake.in
-- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/lapacke-config.cmake @ONLY)
+- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/${LAPACKELIB}-config.cmake @ONLY)
-install(FILES
-- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/lapacke-config.cmake
-- ${LAPACK_BINARY_DIR}/lapacke-config-version.cmake
-- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/lapacke-${LAPACK_VERSION}
+- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/${LAPACKELIB}-config.cmake
+- ${LAPACK_BINARY_DIR}/${LAPACKELIB}-config-version.cmake
+- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${LAPACKELIB}-${LAPACK_VERSION}
- COMPONENT Development
- )
-
--install(EXPORT lapacke-targets
-- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/lapacke-${LAPACK_VERSION}
+-install(EXPORT ${LAPACKELIB}-targets
+- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${LAPACKELIB}-${LAPACK_VERSION}
- COMPONENT Development
- )
diff --git a/LAPACKE/cmake/lapacke-config-build.cmake.in b/LAPACKE/cmake/lapacke-config-build.cmake.in
@@ -570,8 +571,8 @@ deleted file mode 100644
-find_package(LAPACK NO_MODULE)
-
-# Load lapack targets from the build tree, including lapacke targets.
--if(NOT TARGET lapacke)
-- include("@LAPACK_BINARY_DIR@/lapack-targets.cmake")
+-if(NOT TARGET @LAPACKELIB@)
+- include("@LAPACK_BINARY_DIR@/@LAPACKLIB@-targets.cmake")
-endif()
-
-# Hint for project building against lapack
@@ -581,7 +582,7 @@ deleted file mode 100644
-set(LAPACKE_INCLUDE_DIRS "@LAPACK_BINARY_DIR@/include")
-
-# Report lapacke libraries.
--set(LAPACKE_LIBRARIES lapacke ${LAPACK_LIBRARIES})
+-set(LAPACKE_LIBRARIES @LAPACKELIB@ ${LAPACK_LIBRARIES})
diff --git a/LAPACKE/cmake/lapacke-config-install.cmake.in b/LAPACKE/cmake/lapacke-config-install.cmake.in
deleted file mode 100644
--- a/LAPACKE/cmake/lapacke-config-install.cmake.in
@@ -594,12 +595,12 @@ deleted file mode 100644
-get_filename_component(_LAPACKE_PREFIX "${_LAPACKE_PREFIX}" PATH)
-
-# Load the LAPACK package with which we were built.
--set(LAPACK_DIR "${_LAPACKE_PREFIX}/@CMAKE_INSTALL_LIBDIR@/cmake/lapack-@LAPACK_VERSION@")
+-set(LAPACK_DIR "${_LAPACKE_PREFIX}/@CMAKE_INSTALL_LIBDIR@/cmake/@LAPACK@-@LAPACK_VERSION@")
-find_package(LAPACK NO_MODULE)
-
-# Load lapacke targets from the install tree.
--if(NOT TARGET lapacke)
-- include(${_LAPACKE_SELF_DIR}/lapacke-targets.cmake)
+-if(NOT TARGET @LAPACKELIB@)
+- include(${_LAPACKE_SELF_DIR}/@LAPACKELIB@-targets.cmake)
-endif()
-
-# Hint for project building against lapack
@@ -609,7 +610,7 @@ deleted file mode 100644
-set(LAPACKE_INCLUDE_DIRS ${_LAPACKE_PREFIX}/include)
-
-# Report lapacke libraries.
--set(LAPACKE_LIBRARIES lapacke ${LAPACK_LIBRARIES})
+-set(LAPACKE_LIBRARIES @LAPACKELIB@ ${LAPACK_LIBRARIES})
-
-unset(_LAPACKE_PREFIX)
-unset(_LAPACKE_SELF_DIR)
diff --git a/academic/ccolamd/ccolamd.SlackBuild b/academic/ccolamd/ccolamd.SlackBuild
index 7a76de236b..11ecdf6549 100644
--- a/academic/ccolamd/ccolamd.SlackBuild
+++ b/academic/ccolamd/ccolamd.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for CCOLAMD
@@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ccolamd
SRCNAM=SuiteSparse
SUBDIR=CCOLAMD
@@ -29,6 +31,7 @@ VERSION=${VERSION:-2.9.6}
SRCVER=${SRCVER:-5.8.1}
BUILD=${BUILD:-7}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cdo/cdo.SlackBuild b/academic/cdo/cdo.SlackBuild
index 9aef1c9fdb..131526a355 100644
--- a/academic/cdo/cdo.SlackBuild
+++ b/academic/cdo/cdo.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for cdo
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cdo
VERSION=${VERSION:-1.9.10}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/celestia/celestia.SlackBuild b/academic/celestia/celestia.SlackBuild
index 16f553a970..d9f1528908 100644
--- a/academic/celestia/celestia.SlackBuild
+++ b/academic/celestia/celestia.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for celestia
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=celestia
VERSION=${VERSION:-1.6.1}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -103,4 +113,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/celestia/celestia.info b/academic/celestia/celestia.info
index b1dcef0319..5fcebbdcda 100644
--- a/academic/celestia/celestia.info
+++ b/academic/celestia/celestia.info
@@ -7,4 +7,4 @@ DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="gtkglext lua"
MAINTAINER="Heinz Wiesinger"
-EMAIL="pprkut@liwjatan.at"
+EMAIL="pprkut@slackbuilds.org"
diff --git a/academic/chartgeany/README b/academic/chartgeany/README
index 0b49fa40f0..7bcb44052d 100644
--- a/academic/chartgeany/README
+++ b/academic/chartgeany/README
@@ -1,6 +1,6 @@
Chart Geany is a cross platform software solution for market technical
analysis and charting.
-Optional: qt5
+To build the qt5 GUI pass the script the parameter QT5GUI=yes, like
-QT5GUI=yes ./chartgeany.SlackBuild
+ QT5GUI=yes ./chartgeany.SlackBuild
diff --git a/academic/chartgeany/chartgeany.SlackBuild b/academic/chartgeany/chartgeany.SlackBuild
index 7c9da765d8..d84cc81720 100644
--- a/academic/chartgeany/chartgeany.SlackBuild
+++ b/academic/chartgeany/chartgeany.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for chartgeany
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=chartgeany
VERSION=${VERSION:-6.1.5}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -103,4 +113,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/chemtool/chemtool.SlackBuild b/academic/chemtool/chemtool.SlackBuild
index 52acf74472..64a054b58c 100644
--- a/academic/chemtool/chemtool.SlackBuild
+++ b/academic/chemtool/chemtool.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for chemtool
-# Copyright 2006,2008-2013 Robby Workman, Northport, Alabama, USA
+# Copyright 2006-2013,2021 Robby Workman, Tuscaloosa, Alabama, USA
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=chemtool
VERSION=${VERSION:-1.6.14}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -101,4 +111,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -p -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -p -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cholmod/cholmod.SlackBuild b/academic/cholmod/cholmod.SlackBuild
index 5ac8ce8cf7..17d2ddc9d6 100644
--- a/academic/cholmod/cholmod.SlackBuild
+++ b/academic/cholmod/cholmod.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for CHOLMOD
@@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cholmod
SRCNAM=SuiteSparse
SUBDIR=CHOLMOD
@@ -29,6 +31,7 @@ VERSION=${VERSION:-3.0.14}
SRCVER=${SRCVER:-5.8.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -110,4 +120,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cistrome-CEAS/cistrome-CEAS.SlackBuild b/academic/cistrome-CEAS/cistrome-CEAS.SlackBuild
index 3e0270e266..5c87590162 100644
--- a/academic/cistrome-CEAS/cistrome-CEAS.SlackBuild
+++ b/academic/cistrome-CEAS/cistrome-CEAS.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for cistrome-CEAS
-# Copyright 2013-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cistrome-CEAS
VERSION=${VERSION:-1.0.2}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=CEAS-Package
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -91,4 +101,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cistrome-MACS/cistrome-MACS.SlackBuild b/academic/cistrome-MACS/cistrome-MACS.SlackBuild
index ad93aefcdf..eb00d4f261 100644
--- a/academic/cistrome-MACS/cistrome-MACS.SlackBuild
+++ b/academic/cistrome-MACS/cistrome-MACS.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for cistrome-MACS
-# Copyright 2013-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cistrome-MACS
VERSION=${VERSION:-1.4.2}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=MACS
SRCVER=1.4.2-1
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -92,4 +102,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cistrome-conductGO/cistrome-conductGO.SlackBuild b/academic/cistrome-conductGO/cistrome-conductGO.SlackBuild
index 28dc36ec8f..0a4913c9df 100644
--- a/academic/cistrome-conductGO/cistrome-conductGO.SlackBuild
+++ b/academic/cistrome-conductGO/cistrome-conductGO.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for cistrome-conductGO
-# Copyright 2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2016-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cistrome-conductGO
VERSION=${VERSION:-1.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -74,4 +84,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cistrome-extra/cistrome-extra.SlackBuild b/academic/cistrome-extra/cistrome-extra.SlackBuild
index c4c2bef3db..9bb3b21eb0 100644
--- a/academic/cistrome-extra/cistrome-extra.SlackBuild
+++ b/academic/cistrome-extra/cistrome-extra.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for cistrome-extra
-# Copyright 2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2016-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cistrome-extra
VERSION=${VERSION:-git_20170829_6334683}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=cistrome-cistrome-applications-harvard
SRCVER=63346832a22a
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -98,4 +108,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cistrome-extra/cistrome-extra.info b/academic/cistrome-extra/cistrome-extra.info
index e3fa027874..db04a687ac 100644
--- a/academic/cistrome-extra/cistrome-extra.info
+++ b/academic/cistrome-extra/cistrome-extra.info
@@ -1,7 +1,7 @@
PRGNAM="cistrome-extra"
VERSION="git_20170829_6334683"
HOMEPAGE="http://cistrome.org/"
-DOWNLOAD="https://bitbucket.org/cistrome/cistrome-applications-harvard/get/63346832a22a.zip"
+DOWNLOAD="http://slackware.uk/sbosrcarch/by-name/academic/cistrome-extra/63346832a22a.zip"
MD5SUM="0441f0c1bb3ffa156dfe9ed0fccd5dc8"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
diff --git a/academic/cistrome-mdseqpos/cistrome-mdseqpos.SlackBuild b/academic/cistrome-mdseqpos/cistrome-mdseqpos.SlackBuild
index 95867993fa..2fbd96ec14 100644
--- a/academic/cistrome-mdseqpos/cistrome-mdseqpos.SlackBuild
+++ b/academic/cistrome-mdseqpos/cistrome-mdseqpos.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for cistrome-mdseqpos
-# Copyright 2016-2017 Petar Petrov slackalaxy@gmail.com
+# Copyright 2016-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cistrome-mdseqpos
VERSION=${VERSION:-git_20170829_6334683}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=cistrome-cistrome-applications-harvard
SRCVER=63346832a22a
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -98,4 +108,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/clark-ugene/clark-ugene.SlackBuild b/academic/clark-ugene/clark-ugene.SlackBuild
index 6fd7166595..9289eaf23b 100644
--- a/academic/clark-ugene/clark-ugene.SlackBuild
+++ b/academic/clark-ugene/clark-ugene.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for clark-ugene
-# Copyright 2018-2019 Petar Petrov slackalaxy@gmail.com
+# Copyright 2018-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,11 +22,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=clark-ugene
VERSION=${VERSION:-git_6917bf9}
COMMIT=${COMMIT:-6917bf93df9a8c2b80155db367f6672c1b143d9b}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=clark
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -101,4 +111,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cld2/cld2.SlackBuild b/academic/cld2/cld2.SlackBuild
index ba04d548fd..ed17cd8de9 100644
--- a/academic/cld2/cld2.SlackBuild
+++ b/academic/cld2/cld2.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# SlackBuild script for cld2
@@ -24,11 +24,14 @@
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cld2
VERSION=${VERSION:-20150820}
SRCREV=b56fa78a2fe44ac2851bae5bf4f4693a0644da7b
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -128,4 +138,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/clustalo/clustalo.SlackBuild b/academic/clustalo/clustalo.SlackBuild
index bd06c3e763..a8870c0f57 100644
--- a/academic/clustalo/clustalo.SlackBuild
+++ b/academic/clustalo/clustalo.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for clustalo
-# Copyright 2011-2017 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=clustalo
VERSION=${VERSION:-1.2.4}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=clustal-omega
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -101,4 +111,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/clustalw/clustalw.SlackBuild b/academic/clustalw/clustalw.SlackBuild
index 17f5f46bab..83931e066d 100644
--- a/academic/clustalw/clustalw.SlackBuild
+++ b/academic/clustalw/clustalw.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for clustalw
-# Copyright 2011-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,26 +22,36 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=clustalw
VERSION=${VERSION:-2.1}
-BUILD=${BUILD:-1}
+BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
@@ -64,10 +74,10 @@ tar xvf $CWD/$PRGNAM-$VERSION.tar.gz
cd $PRGNAM-$VERSION
chown -R root:root .
find -L . \
- \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 -o -perm 511 \) \
- -exec chmod 755 {} \; -o \
- \( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \
- -exec chmod 644 {} \;
+ \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
+ -o -perm 511 \) -exec chmod 755 {} \; -o \
+ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
+ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
CFLAGS="$SLKCFLAGS" \
CXXFLAGS="$SLKCFLAGS" \
@@ -105,4 +115,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/clustalx/clustalx.SlackBuild b/academic/clustalx/clustalx.SlackBuild
index 0e0932e730..f8c0d9d215 100644
--- a/academic/clustalx/clustalx.SlackBuild
+++ b/academic/clustalx/clustalx.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for clustalx
@@ -25,10 +25,13 @@
# With help from http://aur.archlinux.org/packages.php?ID=25080
# PKGBUILD submitter is mickelliot and maintainer is machoo02
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=clustalx
VERSION=${VERSION:-2.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -113,4 +123,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/colamd/colamd.SlackBuild b/academic/colamd/colamd.SlackBuild
index 3d2ceacd5a..9ebc5c4963 100644
--- a/academic/colamd/colamd.SlackBuild
+++ b/academic/colamd/colamd.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for COLAMD
@@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=colamd
SRCNAM=SuiteSparse
SUBDIR=COLAMD
@@ -29,6 +31,7 @@ VERSION=${VERSION:-2.9.6}
SRCVER=${SRCVER:-5.8.1}
BUILD=${BUILD:-7}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/colin/colin.SlackBuild b/academic/colin/colin.SlackBuild
index 487197cf4d..1231c3520b 100644
--- a/academic/colin/colin.SlackBuild
+++ b/academic/colin/colin.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# SlackBuild build script for colin
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=colin
VERSION=${VERSION:-1.8.2}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -49,7 +52,14 @@ else
LIBDIRSUFFIX=""
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -90,4 +100,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/colin/colin.info b/academic/colin/colin.info
index 39bcb740ad..b8479e1a33 100644
--- a/academic/colin/colin.info
+++ b/academic/colin/colin.info
@@ -5,6 +5,6 @@ DOWNLOAD="https://sourceforge.net/projects/colin2/files/colin-1.8.2.tar.xz"
MD5SUM="e7260f262dbc563b40b6de529d6aa519"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="brotli graphite2"
+REQUIRES=""
MAINTAINER="Prof. HORSTMANN"
EMAIL="wmh@eipg.fr"
diff --git a/academic/convertall/convertall.SlackBuild b/academic/convertall/convertall.SlackBuild
index fdb395cf6c..13ca4c524a 100644
--- a/academic/convertall/convertall.SlackBuild
+++ b/academic/convertall/convertall.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
#
# Slackware build script for convertall
#
@@ -28,11 +28,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=convertall
SRCNAM=ConvertAll
VERSION=${VERSION:-0.8.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -42,7 +45,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -95,4 +105,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/convertall/convertall.info b/academic/convertall/convertall.info
index 181b2b33f8..9c62719446 100644
--- a/academic/convertall/convertall.info
+++ b/academic/convertall/convertall.info
@@ -5,6 +5,6 @@ DOWNLOAD="https://github.com/doug-101/ConvertAll/releases/download/v0.8.0/conver
MD5SUM="6e2513d056bc10e2f037591bc08a8e21"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="python3 qt5 python3-PyQt5"
+REQUIRES=""
MAINTAINER="John Berger"
EMAIL="irgunii ampersand gmail . com"
diff --git a/academic/copasi/copasi.SlackBuild b/academic/copasi/copasi.SlackBuild
index ea41da828c..69f308ccc7 100644
--- a/academic/copasi/copasi.SlackBuild
+++ b/academic/copasi/copasi.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for copasi
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=copasi
VERSION=${VERSION:-4.28.226}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
ARCH="$(uname -m)"
@@ -44,7 +47,14 @@ case "$ARCH" in
;;
esac
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -82,4 +92,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/coq/coq.SlackBuild b/academic/coq/coq.SlackBuild
index afa9d5f58f..ac1985a5dc 100644
--- a/academic/coq/coq.SlackBuild
+++ b/academic/coq/coq.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for coq
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=coq
VERSION=${VERSION:-8.9.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cryptominisat/cryptominisat.SlackBuild b/academic/cryptominisat/cryptominisat.SlackBuild
index f8f0deea19..357e4ab133 100644
--- a/academic/cryptominisat/cryptominisat.SlackBuild
+++ b/academic/cryptominisat/cryptominisat.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for cryptominisat
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cryptominisat
VERSION=${VERSION:-5.7.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -101,4 +111,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/csparse/csparse.SlackBuild b/academic/csparse/csparse.SlackBuild
index 4aa1aa9612..d75ef5a125 100644
--- a/academic/csparse/csparse.SlackBuild
+++ b/academic/csparse/csparse.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for CSparse
@@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=csparse
SRCNAM=SuiteSparse
SUBDIR=CSparse
@@ -29,6 +31,7 @@ VERSION=${VERSION:-3.2.0}
SRCVER=${SRCVER:-5.8.1}
BUILD=${BUILD:-5}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cufflinks/README b/academic/cufflinks/README
index 7afb95ee6e..5c851b1d27 100644
--- a/academic/cufflinks/README
+++ b/academic/cufflinks/README
@@ -11,6 +11,8 @@ Berkeley, Steven Salzberg's computational genomics group at the
Institute of Genetic Medicine at Johns Hopkins University, and Barbara
Wold's lab at Caltech.
+NOTE: This just repackages the binaries provided from upstream.
+
Reference:
Ali Mortazavi, Brian A Williams, Kenneth McCue, Lorian Schaeffer and
Barbara Wold, "Mapping and quantifying mammalian transcriptomes by
diff --git a/academic/cufflinks/cufflinks.SlackBuild b/academic/cufflinks/cufflinks.SlackBuild
index 33a09282e1..dc1fd7f6de 100644
--- a/academic/cufflinks/cufflinks.SlackBuild
+++ b/academic/cufflinks/cufflinks.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for cufflinks
-# Copyright 2013-2019 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,50 +22,47 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-# With help from Archlinux AUR and Gentoo:
-# https://aur.archlinux.org/packages/cufflinks/
-# http://euscan.iksaif.net/package/sci-biology/cufflinks/
+# For Slackware 15.0 I switched to just repackaging the upstream binaries.
+# When I find a patch that fixes the build against boost and a bunch of other
+# fixes, I will revert back to source build. Let's have ot like this for now.
+
+cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cufflinks
VERSION=${VERSION:-2.2.1}
-BUILD=${BUILD:-1}
+BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
- case "$( uname -m )" in
- i?86) ARCH=i586 ;;
- arm*) ARCH=arm ;;
- *) ARCH=$( uname -m ) ;;
- esac
+ ARCH="$( uname -m )"
+fi
+
+if [ "$ARCH" != "x86_64" ]; then
+ printf "\n\n$ARCH is not supported... \n" >&2
+ exit 1
+fi
+
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
fi
-CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i586" ]; then
- SLKCFLAGS="-O2 -march=i586 -mtune=i686"
- LIBDIRSUFFIX=""
-elif [ "$ARCH" = "i686" ]; then
- SLKCFLAGS="-O2 -march=i686 -mtune=i686"
- LIBDIRSUFFIX=""
-elif [ "$ARCH" = "x86_64" ]; then
- SLKCFLAGS="-O2 -fPIC"
- LIBDIRSUFFIX="64"
-else
- SLKCFLAGS="-O2"
- LIBDIRSUFFIX=""
-fi
-
set -e
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
-rm -rf $PRGNAM-$VERSION
-tar xvf $CWD/$PRGNAM-$VERSION.tar.gz
-cd $PRGNAM-$VERSION
+rm -rf $PRGNAM-${VERSION}.Linux_${ARCH}
+tar xvf $CWD/$PRGNAM-${VERSION}.Linux_${ARCH}.tar.gz
+cd $PRGNAM-${VERSION}.Linux_${ARCH}
chown -R root:root .
find -L . \
\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
@@ -73,22 +70,17 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
-export EIGEN_CPPFLAGS="-I/usr/include/eigen3"
-
-CFLAGS="$SLKCFLAGS" \
-CXXFLAGS="$SLKCFLAGS" \
-./configure \
- --prefix=/usr \
- --libdir=/usr/lib${LIBDIRSUFFIX} \
- --sysconfdir=/etc \
- --disable-optim \
- --with-boost-libdir=/usr/lib${LIBDIRSUFFIX} \
- --localstatedir=/var \
- --mandir=/usr/man \
- --build=$ARCH-slackware-linux
+# Just in case...
+sed -i "s:python:python2:" cuffmerge
-make
-make install DESTDIR=$PKG
+install -D -m755 cuffcompare $PKG/usr/bin/cuffcompare
+install -D -m755 cuffdiff $PKG/usr/bin/cuffdiff
+install -D -m755 cufflinks $PKG/usr/bin/cufflinks
+install -D -m755 cuffmerge $PKG/usr/bin/cuffmerge
+install -D -m755 cuffnorm $PKG/usr/bin/cuffnorm
+install -D -m755 cuffquant $PKG/usr/bin/cuffquant
+install -D -m755 gffread $PKG/usr/bin/gffread
+install -D -m755 gtf_to_sam $PKG/usr/bin/gtf_to_sam
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
@@ -104,4 +96,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cufflinks/cufflinks.info b/academic/cufflinks/cufflinks.info
index 6f858f0065..6881614543 100644
--- a/academic/cufflinks/cufflinks.info
+++ b/academic/cufflinks/cufflinks.info
@@ -1,10 +1,11 @@
PRGNAM="cufflinks"
VERSION="2.2.1"
HOMEPAGE="http://cufflinks.cbcb.umd.edu/"
-DOWNLOAD="http://cole-trapnell-lab.github.io/cufflinks/assets/downloads/cufflinks-2.2.1.tar.gz"
-MD5SUM="9a5ba7a7710cd864932cf205c17851f0"
-DOWNLOAD_x86_64=""
-MD5SUM_x86_64=""
+DOWNLOAD="UNSUPPORTED"
+MD5SUM=""
+DOWNLOAD_x86_64="http://cole-trapnell-lab.github.io/cufflinks/assets/downloads/cufflinks-2.2.1.Linux_x86_64.tar.gz"
+MD5SUM_x86_64="7e693d182dcfda8aeef8523219ea9ea7"
REQUIRES="samtools-legacy"
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
+
diff --git a/academic/cutadapt/cutadapt.SlackBuild b/academic/cutadapt/cutadapt.SlackBuild
index 38a1c0f535..eb103094cd 100644
--- a/academic/cutadapt/cutadapt.SlackBuild
+++ b/academic/cutadapt/cutadapt.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for cutadapt
-# Copyright 2015-2017 Petar Petrov slackalaxy@gmail.com
+# Copyright 2015-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cutadapt
VERSION=${VERSION:-1.14}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -82,4 +92,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cvc4/cvc4.SlackBuild b/academic/cvc4/cvc4.SlackBuild
index d3a964cf03..0d2d843636 100644
--- a/academic/cvc4/cvc4.SlackBuild
+++ b/academic/cvc4/cvc4.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for cvc4
@@ -26,10 +26,13 @@
# Add new Python bindings (requires a newer version of Cython?)
# Add Java bindings (requires a newer version of CMake?)
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cvc4
VERSION=${VERSION:-1.8}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=CVC4
if [ -z "$ARCH" ]; then
@@ -40,7 +43,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -112,4 +122,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/cxsparse/cxsparse.SlackBuild b/academic/cxsparse/cxsparse.SlackBuild
index 50237f46a6..ea960f7d72 100644
--- a/academic/cxsparse/cxsparse.SlackBuild
+++ b/academic/cxsparse/cxsparse.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for CXSparse
@@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=cxsparse
SRCNAM=SuiteSparse
SUBDIR=CXSparse
@@ -29,6 +31,7 @@ VERSION=${VERSION:-3.2.0}
SRCVER=${SRCVER:-5.8.1}
BUILD=${BUILD:-5}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/dakota/dakota.SlackBuild b/academic/dakota/dakota.SlackBuild
index bd119d0e0d..958c601ec1 100644
--- a/academic/dakota/dakota.SlackBuild
+++ b/academic/dakota/dakota.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Dakota
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=dakota
VERSION=${VERSION:-6.11.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -95,4 +105,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/datamash/datamash.SlackBuild b/academic/datamash/datamash.SlackBuild
index 4661750499..4fde6484d4 100644
--- a/academic/datamash/datamash.SlackBuild
+++ b/academic/datamash/datamash.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for datamash
-# Copyright 2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2020-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=datamash
VERSION=${VERSION:-1.7}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -104,4 +114,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/diamond/diamond.SlackBuild b/academic/diamond/diamond.SlackBuild
index 9a59218bbd..0c85f52415 100644
--- a/academic/diamond/diamond.SlackBuild
+++ b/academic/diamond/diamond.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for diamond
-# Copyright 2018-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2018-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=diamond
VERSION=${VERSION:-0.9.36}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -94,4 +104,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/drawtiming/drawtiming.SlackBuild b/academic/drawtiming/drawtiming.SlackBuild
index 8fde14c99a..d8f4095833 100644
--- a/academic/drawtiming/drawtiming.SlackBuild
+++ b/academic/drawtiming/drawtiming.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for drawtiming
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=drawtiming
VERSION=${VERSION:-0.7.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,8 +38,15 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
STARTDIR=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ cat $CWD/doinst.sh > $PKG/install/doinst.sh
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ds9/README b/academic/ds9/README
index 5bffb53e7f..bab29ee863 100644
--- a/academic/ds9/README
+++ b/academic/ds9/README
@@ -1,7 +1,10 @@
-SAOImage DS9 is an application for astronomical imaging and data
-visualization. It supports the FITS format and binary tables. As well
-as standard imaging manipulation tools, it includes many advanced
-features such as multiple frame buffers, 2D, 3D, RGB frame buffers,
-region and colormap manipulation, mosaic images and geometric markers.
-DS9 supports a variety of coordinate systems and it has a user
-configurable interface.
+SAOImageDS9 is an astronomical imaging and data visualization application. DS9
+is a stand-alone application which supports FITS images and binary tables,
+multiple frame buffers, region manipulation, and many scale algorithms and
+colormaps. DS9 supports a consistent set of GUI and functional capabilities,
+as well as advanced features such as 2-D, 3-D and RGB frame buffers, mosaic
+images, tiling, blinking, geometric markers, colormap manipulation, scaling,
+arbitrary zoom, cropping, rotation, pan, and a variety of coordinate systems.
+The GUI for DS9 is user configurable. GUI elements such as the coordinate
+display, panner, magnifier, horizontal and vertical graphs, button bar, and
+color bar can be configured via menus or the command line.
diff --git a/academic/ds9/ds9.SlackBuild b/academic/ds9/ds9.SlackBuild
index f6767b091d..ceb9d596c5 100644
--- a/academic/ds9/ds9.SlackBuild
+++ b/academic/ds9/ds9.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
-# Slackware build script for SAOImage DS9
+# Slackware build script for ds9 (SAOImageDS9)
-# Copyright 2020 Nitish Ragoomundun, Mauritius
+# Copyright 2021 Nitish Ragoomundun, Mauritius
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ds9
-VERSION=${VERSION:-8.1}
+VERSION=${VERSION:-8.2.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -78,9 +88,12 @@ CXXFLAGS="$SLKCFLAGS" \
--sysconfdir=/etc \
--localstatedir=/var \
--docdir=/usr/doc/$PRGNAM-$VERSION \
- --with-arch=${ARCH}-slackware-linux
+ --x-includes=/usr/include \
+ --x-libraries=/usr/lib$LIBDIRSUFFIX \
+ --with-x \
+ --with-arch=$ARCH-slackware-linux
-make -j1
+make
# Install the ds9 executable
mkdir -p $PKG/usr/{bin,doc/$PRGNAM-$VERSION}
@@ -102,4 +115,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ds9/ds9.desktop b/academic/ds9/ds9.desktop
index 318d5d41c2..08b18e0bbd 100644
--- a/academic/ds9/ds9.desktop
+++ b/academic/ds9/ds9.desktop
@@ -1,7 +1,7 @@
[Desktop Entry]
-Name=DS9
-GenericName=SAOImage DS9
-Comment=SAOImage DS9 Astronomical Software
+Name=ds9
+GenericName=SAOImageDS9
+Comment=Astronomical Software and FITS viewing program
Exec=ds9
Icon=ds9-icon
Terminal=false
diff --git a/academic/ds9/ds9.info b/academic/ds9/ds9.info
index f6d9328bcf..475fe53290 100644
--- a/academic/ds9/ds9.info
+++ b/academic/ds9/ds9.info
@@ -1,8 +1,8 @@
PRGNAM="ds9"
-VERSION="8.1"
-HOMEPAGE="http://ds9.si.edu/site/Home.html"
-DOWNLOAD="http://ds9.si.edu/archive/source/ds9.8.1.tar.gz"
-MD5SUM="d9b3c43c9375328e4872b7eefb0f86bc"
+VERSION="8.2.1"
+HOMEPAGE="https://sites.google.com/cfa.harvard.edu/saoimageds9/home"
+DOWNLOAD="https://ds9.si.edu/archive/source/ds9.8.2.1.tar.gz"
+MD5SUM="99afcdc4a72e2ca15fda0b5f9af945af"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/ds9/slack-desc b/academic/ds9/slack-desc
index b07917b061..b4bd41a641 100644
--- a/academic/ds9/slack-desc
+++ b/academic/ds9/slack-desc
@@ -15,5 +15,5 @@ ds9: multiple 2D, 3D, RGB frame buffers, colormap manipulation and mosaic
ds9: images. DS9 also supports a variety of coordinate systems and has a
ds9: user configurable interface.
ds9:
-ds9: Homepage: http://ds9.si.edu/site/Home.html
+ds9: Homepage: https://sites.google.com/cfa.harvard.edu/saoimageds9/home
ds9:
diff --git a/academic/easy_spice/easy_spice.SlackBuild b/academic/easy_spice/easy_spice.SlackBuild
index fed5192d96..3dc14450cc 100644
--- a/academic/easy_spice/easy_spice.SlackBuild
+++ b/academic/easy_spice/easy_spice.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for easy_spice
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=easy_spice
VERSION=${VERSION:-0.6.8}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -118,4 +128,4 @@ cat $CWD/doinst.sh > $PKG/install/doinst.sh
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ed-v6/ed-v6.SlackBuild b/academic/ed-v6/ed-v6.SlackBuild
index e2da7582a0..d52282c25f 100644
--- a/academic/ed-v6/ed-v6.SlackBuild
+++ b/academic/ed-v6/ed-v6.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ed-v6
# Copyright 2019 Dave Woodfall <dave@slackbuilds.org>
@@ -21,11 +21,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ed-v6
VERSION=${VERSION:-c72c0e}
SRCVERSION=${SRCVERSION:-c72c0e9445af26bd9fde2d39da5628e6dabf36dd}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -87,4 +97,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/edsim51di/edsim51di.SlackBuild b/academic/edsim51di/edsim51di.SlackBuild
index 4f85b23a99..22dc9adb1e 100644
--- a/academic/edsim51di/edsim51di.SlackBuild
+++ b/academic/edsim51di/edsim51di.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for EdSim51Di
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=edsim51di
VERSION=${VERSION:-2.1.20}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,8 +38,15 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
STARTDIR=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -108,4 +118,4 @@ EOF
chmod +x $PKG/usr/bin/edsim51di
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/engauge/engauge.SlackBuild b/academic/engauge/engauge.SlackBuild
index 59cf65ae74..395fe78e5c 100644
--- a/academic/engauge/engauge.SlackBuild
+++ b/academic/engauge/engauge.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for engauge
# written by <pedro@gepasi.org>
@@ -21,10 +21,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=engauge
VERSION=${VERSION:-10.10}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -34,7 +37,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -114,4 +124,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/engauge/engauge.info b/academic/engauge/engauge.info
index ec1d664a96..ff9fb67efe 100644
--- a/academic/engauge/engauge.info
+++ b/academic/engauge/engauge.info
@@ -5,6 +5,6 @@ DOWNLOAD="https://github.com/markummitchell/engauge-digitizer/archive/v10.10/eng
MD5SUM="fe00faf453ff25f355fc46f81280d69a"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="log4cpp poppler-qt5"
+REQUIRES="log4cpp"
MAINTAINER="Pedro Mendes"
EMAIL="pedro@gepasi.org"
diff --git a/academic/ent/ent.SlackBuild b/academic/ent/ent.SlackBuild
index df134133cf..92d0037611 100644
--- a/academic/ent/ent.SlackBuild
+++ b/academic/ent/ent.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ent
@@ -6,10 +6,13 @@
# Licensed under the WTFPL. See http://www.wtfpl.net/txt/copying/ for details.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ent
VERSION=${VERSION:-20080128}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ARCHIVE=random.zip
@@ -21,7 +24,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -74,4 +84,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/eprover/eprover.SlackBuild b/academic/eprover/eprover.SlackBuild
index 5ab9c7485b..f70a215559 100644
--- a/academic/eprover/eprover.SlackBuild
+++ b/academic/eprover/eprover.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for eprover
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=eprover
VERSION=${VERSION:-2.5}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -98,4 +108,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/equalx/equalx.SlackBuild b/academic/equalx/equalx.SlackBuild
index 900e97e5e6..712c8dc7cf 100644
--- a/academic/equalx/equalx.SlackBuild
+++ b/academic/equalx/equalx.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for equalx
@@ -34,10 +34,13 @@
# - use a .desktop file that validates
# - minor cleanups/etc in script, slack-desc, README
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=equalx
VERSION=${VERSION:-0.7.1}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -47,7 +50,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -111,5 +121,5 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ess/ess.SlackBuild b/academic/ess/ess.SlackBuild
index 30cf886824..55192e86a6 100644
--- a/academic/ess/ess.SlackBuild
+++ b/academic/ess/ess.SlackBuild
@@ -1,18 +1,28 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ESS (Emacs Speaks Statistics)
# Written by Joel J. Adamson <adamsonj@email.unc.edu>
# Maintained by Nicky Chorley <nick.chorley@gmail.com>
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ess
VERSION=${VERSION:-17.11}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ARCH=noarch
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -48,4 +58,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/evopedia_qt/evopedia_qt.SlackBuild b/academic/evopedia_qt/evopedia_qt.SlackBuild
index 783878ba4a..7092baa732 100644
--- a/academic/evopedia_qt/evopedia_qt.SlackBuild
+++ b/academic/evopedia_qt/evopedia_qt.SlackBuild
@@ -1,13 +1,16 @@
-#!/bin/sh
+#!/bin/bash
#
# Slackware build script for evopedia
#
# Written by Dan-Simon Myrland <dansimon@radiotube.org>
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=evopedia_qt
VERSION=${VERSION:-0.4.4}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -17,7 +20,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -52,4 +62,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/exonerate/exonerate.SlackBuild b/academic/exonerate/exonerate.SlackBuild
index 6fef2cf6de..03c9ba763d 100644
--- a/academic/exonerate/exonerate.SlackBuild
+++ b/academic/exonerate/exonerate.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for exonerate
-# Copyright 2017 Petar petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=exonerate
VERSION=${VERSION:-2.4.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -80,7 +90,7 @@ CXXFLAGS="$SLKCFLAGS" \
--docdir=/usr/doc/$PRGNAM-$VERSION \
--build=$ARCH-slackware-linux
-make
+make -j1
make install DESTDIR=$PKG
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
@@ -97,4 +107,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/extrema/extrema.SlackBuild b/academic/extrema/extrema.SlackBuild
index d13f7d00a4..68178383b3 100644
--- a/academic/extrema/extrema.SlackBuild
+++ b/academic/extrema/extrema.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for extrema
@@ -25,10 +25,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=extrema
VERSION=${VERSION:-4.4.5}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -115,4 +125,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/fann/fann.SlackBuild b/academic/fann/fann.SlackBuild
index cd11930822..6706d67150 100644
--- a/academic/fann/fann.SlackBuild
+++ b/academic/fann/fann.SlackBuild
@@ -1,13 +1,16 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for fann
# Written by Andrew Conway (ajc AT countingthoughts DOT com)
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=fann
VERSION=${VERSION:-2.2.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAME=FANN-$VERSION-Source
@@ -19,7 +22,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -84,4 +94,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/fastqc/fastqc.SlackBuild b/academic/fastqc/fastqc.SlackBuild
index d0add9f9cd..e1e1cf5a59 100644
--- a/academic/fastqc/fastqc.SlackBuild
+++ b/academic/fastqc/fastqc.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for fastqc
@@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=fastqc
SRCNAM=FastQC
VERSION=${VERSION:-0.11.9}
@@ -29,6 +31,7 @@ SRCVER=${SRCVER:-v0.11.9}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ARCH=noarch
@@ -37,7 +40,14 @@ JBZIP=jbzip2-0.9.jar
SAM=sam-1.103.jar
CISD=cisd-jhdf5.jar
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -85,4 +95,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/fet/fet.SlackBuild b/academic/fet/fet.SlackBuild
index 8477dfc8cc..3c707e3465 100644
--- a/academic/fet/fet.SlackBuild
+++ b/academic/fet/fet.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for fet
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=fet
-VERSION=${VERSION:-5.49.0}
+VERSION=${VERSION:-5.49.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -101,4 +111,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/fet/fet.info b/academic/fet/fet.info
index a5108b1f65..d111ec04b5 100644
--- a/academic/fet/fet.info
+++ b/academic/fet/fet.info
@@ -1,10 +1,10 @@
PRGNAM="fet"
-VERSION="5.49.0"
+VERSION="5.49.1"
HOMEPAGE="https://www.lalescu.ro/liviu/fet/"
-DOWNLOAD="https://www.lalescu.ro/liviu/fet/download/fet-5.49.0.tar.bz2"
-MD5SUM="3fbe076d1551ba47d1ca13c4b1ea06b0"
+DOWNLOAD="https://www.lalescu.ro/liviu/fet/download/fet-5.49.1.tar.bz2"
+MD5SUM="063d3e4fa30c93820737fe8dbb28f55c"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="qt5"
+REQUIRES=""
MAINTAINER="R.S.Ananda Murthy"
EMAIL="rsamurti@gmail.com"
diff --git a/academic/fiji/README b/academic/fiji/README
index 873045e097..1b51100f6a 100644
--- a/academic/fiji/README
+++ b/academic/fiji/README
@@ -32,6 +32,8 @@ Fiji is Just ImageJ, with extras. It is a distribution of ImageJ with
many plugins useful for scientific image analysis in fields such as
life sciences. It is actively maintained, with updates released often.
+NOTE: This comes with its own Java environment.
+
Citing
Schindelin, J.; Arganda-Carreras, I. & Frise, E. et al. (2012)
"Fiji: an open-source platform for biological-image analysis"
diff --git a/academic/fiji/fiji.SlackBuild b/academic/fiji/fiji.SlackBuild
index 68c84ec4a6..4626a80a59 100644
--- a/academic/fiji/fiji.SlackBuild
+++ b/academic/fiji/fiji.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for fiji
-# Copyright 2018-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2018-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=fiji
VERSION=${VERSION:-20200902_2101}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
DIRNAM=Fiji.app
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -45,16 +55,23 @@ OUTPUT=${OUTPUT:-/tmp}
set -e
# Stop if arch is not supported
-if [ "$ARCH" != "x86_64" ]; then
+if [ "$ARCH" != "i386" ] && [ "$ARCH" != "x86_64" ]; then
printf "\n\n$ARCH is not supported... \n"
exit 1
fi
+# Determine suffix
+if [ "$ARCH" = "x86_64" ]; then
+ SUFFIX=linux64
+else
+ SUFFIX=inux32
+fi
+
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
rm -rf $DIRNAM
-tar xvf $CWD/${PRGNAM}-nojre.tar.gz
+tar xvf $CWD/${PRGNAM}-$SUFFIX.tar.gz
cd $DIRNAM
chown -R root:root .
find -L . \
@@ -64,7 +81,7 @@ find -L . \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
# Rename the binary we need
-mv ImageJ-linux64 $PRGNAM
+mv ImageJ-$SUFFIX $PRGNAM
# We will put here two tools, so they are not run at startup.
mkdir -p unused
@@ -85,15 +102,19 @@ cd ..
# Update plugins, so that the latest are included in the package. This
# will download stuff during the package creation, something that is
-# against the policy of SlackBuilds.org. However, it is your system,
+# against the policy of SlackBuilds.org. However, it is _your_ system,
# so if you _really_ want this, uncomment the line below.
# ./$PRGNAM --update list-local-only
# Copy the folders, db.xml and the renamed binary to /opt
mkdir -p $PKG/opt/$PRGNAM
cp -a \
+ Contents \
images \
jars \
+ java \
+ lib \
+ licenses \
luts \
macros \
plugins \
@@ -132,4 +153,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/fiji/fiji.info b/academic/fiji/fiji.info
index 20c501e557..9e3928ff4b 100644
--- a/academic/fiji/fiji.info
+++ b/academic/fiji/fiji.info
@@ -1,10 +1,10 @@
PRGNAM="fiji"
-VERSION="20200902_2101"
+VERSION="20201104_1356"
HOMEPAGE="https://fiji.sc/"
-DOWNLOAD="UNSUPPORTED"
-MD5SUM=""
-DOWNLOAD_x86_64="https://downloads.imagej.net/fiji/archive/20200902-2101/fiji-nojre.tar.gz"
-MD5SUM_x86_64="79c19275017206c662c4381dd43f7dc2"
-REQUIRES="jdk"
+DOWNLOAD="https://downloads.imagej.net/fiji/archive/20201104-1356/fiji-linux32.tar.gz"
+MD5SUM="bff409ed4b683d67e3b3ac0d38423f0d"
+DOWNLOAD_x86_64="https://downloads.imagej.net/fiji/archive/20201104-1356/fiji-linux64.tar.gz"
+MD5SUM_x86_64="7141a774a0c759f6fea0875a6cbf58b9"
+REQUIRES=""
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/finchtv/finchtv.SlackBuild b/academic/finchtv/finchtv.SlackBuild
index e94229af50..8493e202c8 100644
--- a/academic/finchtv/finchtv.SlackBuild
+++ b/academic/finchtv/finchtv.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for finchtv
-# Copyright 2015-2017 Petar Petrov slackalaxy@gmail.com
+# Copyright 2015-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,15 +22,25 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=finchtv
VERSION=${VERSION:-1.3.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCVER=1_3_1
ARCH=i386 # This will work on a stock Slackware64 as well.
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -74,4 +84,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/finchtv/finchtv.info b/academic/finchtv/finchtv.info
index d2a1ab4fb0..35feb66ca6 100644
--- a/academic/finchtv/finchtv.info
+++ b/academic/finchtv/finchtv.info
@@ -1,6 +1,6 @@
PRGNAM="finchtv"
VERSION="1.3.1"
-HOMEPAGE="http://jblseqdat.bioc.cam.ac.uk/gnmweb/download/soft/FinchTV_1.4/doc/"
+HOMEPAGE="https://digitalworldbiology.com/FinchTV"
DOWNLOAD="https://sourceforge.net/projects/sboppetrov/files/finchtv/finchtv_1_3_1.tar.gz"
MD5SUM="bafea0b08c5348cbe745d1a4857948a4"
DOWNLOAD_x86_64=""
diff --git a/academic/fityk/README b/academic/fityk/README
index 423a6114f5..7eb0de3a52 100644
--- a/academic/fityk/README
+++ b/academic/fityk/README
@@ -15,5 +15,3 @@ Pearson VII, bifurcated Gaussian, EMG, Doniach-Sunjic, etc.);
but it is suitable for fitting any curve to 2D (x,y) data.
Fityk is distributed under an open source licence (GPLv2+).
-
-Optional dependency: gnuplot (can be used with the CLI)
diff --git a/academic/fityk/fityk.SlackBuild b/academic/fityk/fityk.SlackBuild
index c09ec3cc59..be395693d4 100644
--- a/academic/fityk/fityk.SlackBuild
+++ b/academic/fityk/fityk.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for fityk
# Based on Slackware 14.2 SlackBuild
#
@@ -23,10 +23,13 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=fityk
VERSION=${VERSION:-1.3.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -95,4 +105,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/flann/flann.SlackBuild b/academic/flann/flann.SlackBuild
index 12233f7101..c9be97ef6e 100644
--- a/academic/flann/flann.SlackBuild
+++ b/academic/flann/flann.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for flann
@@ -25,10 +25,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=flann
VERSION=${VERSION:-1.9.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -94,4 +104,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/flashqard/flashqard.SlackBuild b/academic/flashqard/flashqard.SlackBuild
index f749eb317b..c7ca3fb4a5 100644
--- a/academic/flashqard/flashqard.SlackBuild
+++ b/academic/flashqard/flashqard.SlackBuild
@@ -1,12 +1,15 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for flashqard
# written by Mehdi Esmaeelpour ariarat@gmail.com www.slack-world.com
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=flashqard
VERSION=${VERSION:-0.15.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -16,7 +19,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -80,4 +90,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/flexbar/flexbar.SlackBuild b/academic/flexbar/flexbar.SlackBuild
index f4c28a8ef6..6f3c535ec2 100644
--- a/academic/flexbar/flexbar.SlackBuild
+++ b/academic/flexbar/flexbar.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for flexbar
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=flexbar
VERSION=${VERSION:-3.5.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
LIBNAM=seqan-library
LIBVER=${LIBVER:-2.4.0}
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -98,4 +108,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/free42/free42.SlackBuild b/academic/free42/free42.SlackBuild
index 86af1ffdb0..537de2fc00 100644
--- a/academic/free42/free42.SlackBuild
+++ b/academic/free42/free42.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for free42
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=free42
VERSION=${VERSION:-2.0.4}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -97,4 +107,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/g3data/g3data.SlackBuild b/academic/g3data/g3data.SlackBuild
index 7e6b547441..c188881d18 100644
--- a/academic/g3data/g3data.SlackBuild
+++ b/academic/g3data/g3data.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
#
# Slackware build script for g3data
#
@@ -23,10 +23,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=g3data
VERSION=${VERSION:-1.5.4}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -99,4 +109,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/galculator/galculator.SlackBuild b/academic/galculator/galculator.SlackBuild
index a9bc36534e..6edd8131a3 100644
--- a/academic/galculator/galculator.SlackBuild
+++ b/academic/galculator/galculator.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for galculator
@@ -23,10 +23,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=galculator
VERSION=${VERSION:-2.1.4}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -96,4 +106,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gaw3/gaw3.SlackBuild b/academic/gaw3/gaw3.SlackBuild
index 88a77eaf61..91a3888a90 100644
--- a/academic/gaw3/gaw3.SlackBuild
+++ b/academic/gaw3/gaw3.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Gaw3
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gaw3
VERSION=${VERSION:-20170716}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -99,4 +109,4 @@ rm $PKG/usr/share/applications/gaw.desktop
rm -r $PKG/usr/share/pixmaps
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gchemutils/gchemutils.SlackBuild b/academic/gchemutils/gchemutils.SlackBuild
index 99eb6046b1..72696658c8 100644
--- a/academic/gchemutils/gchemutils.SlackBuild
+++ b/academic/gchemutils/gchemutils.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gchemutils
-# Copyright 2011-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gchemutils
VERSION=${VERSION:-0.14.17}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=gnome-chemistry-utils
MOZILLA=${MOZILLA:-YES} # Build the Mozilla plugin
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -112,4 +122,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gcompris-qt/gcompris-qt.SlackBuild b/academic/gcompris-qt/gcompris-qt.SlackBuild
index 60c1f5f4bb..a4c7c7151d 100644
--- a/academic/gcompris-qt/gcompris-qt.SlackBuild
+++ b/academic/gcompris-qt/gcompris-qt.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gcompris-qt
@@ -32,10 +32,13 @@
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <https://www.gnu.org/licenses/>.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gcompris-qt
-VERSION=${VERSION:-1.0}
+VERSION=${VERSION:-1.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
ARCH="$( uname -m )"
@@ -56,7 +59,14 @@ case "$ARCH" in
;;
esac
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -100,4 +110,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gcompris-qt/gcompris-qt.info b/academic/gcompris-qt/gcompris-qt.info
index 129dfb3ac0..5ff869de90 100644
--- a/academic/gcompris-qt/gcompris-qt.info
+++ b/academic/gcompris-qt/gcompris-qt.info
@@ -1,10 +1,10 @@
PRGNAM="gcompris-qt"
-VERSION="1.0"
-HOMEPAGE="http://gcompris.net/"
-DOWNLOAD="http://gcompris.net/download/qt/linux/gcompris-qt-1.0-Linux32.sh"
-MD5SUM="d2beeaecff1a7488d693e037a4b0e325"
-DOWNLOAD_x86_64="http://gcompris.net/download/qt/linux/gcompris-qt-1.0-Linux64.sh"
-MD5SUM_x86_64="327d7b397312e40419964bb6e5f2b828"
-REQUIRES="krb5"
+VERSION="1.1"
+HOMEPAGE="https://gcompris.net/"
+DOWNLOAD="https://gcompris.net/download/qt/linux/gcompris-qt-1.1-Linux32.sh"
+MD5SUM="381f16e7f476a479e663e55c0f386c13"
+DOWNLOAD_x86_64="https://gcompris.net/download/qt/linux/gcompris-qt-1.1-Linux64.sh"
+MD5SUM_x86_64="06e571bb48a1fb30edeb00c5e6295cd9"
+REQUIRES=""
MAINTAINER="Willy Sudiarto Raharjo"
EMAIL="willysr@slackbuilds.org"
diff --git a/academic/gcompris/gcompris.SlackBuild b/academic/gcompris/gcompris.SlackBuild
index 0d240c7b0c..e4b1c0a7c2 100644
--- a/academic/gcompris/gcompris.SlackBuild
+++ b/academic/gcompris/gcompris.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gcompris
@@ -27,10 +27,13 @@
# NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
# SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gcompris
VERSION=${VERSION:-17.05}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -40,7 +43,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -101,4 +111,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gcompris/gcompris.info b/academic/gcompris/gcompris.info
index 61262a62e5..b7710c8c8d 100644
--- a/academic/gcompris/gcompris.info
+++ b/academic/gcompris/gcompris.info
@@ -1,7 +1,7 @@
PRGNAM="gcompris"
VERSION="17.05"
-HOMEPAGE="http://gcompris.net/"
-DOWNLOAD="http://gcompris.net/download/gtk/src/gcompris-17.05.tar.bz2"
+HOMEPAGE="https://gcompris.net/"
+DOWNLOAD="https://gcompris.net/download/gtk/src/gcompris-17.05.tar.bz2"
MD5SUM="6c0733db29ca3d6b4100cdccc7a7a720"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
diff --git a/academic/geda-gaf/geda-gaf.SlackBuild b/academic/geda-gaf/geda-gaf.SlackBuild
index 790eb328a6..a3edd0b2a3 100644
--- a/academic/geda-gaf/geda-gaf.SlackBuild
+++ b/academic/geda-gaf/geda-gaf.SlackBuild
@@ -1,32 +1,42 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gEDA / gaf
# Written by Stephen Van Berg stephen_van_berg@earlicker.com
# Updated by Kyle Guinn <elyk03@gmail.com>
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=geda-gaf
-VERSION=${VERSION:-1.8.2}
+VERSION=${VERSION:-1.10.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
DOCS="ABOUT-NLS AUTHORS COPYING* ChangeLog HACKING INSTALL NEWS README"
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
@@ -85,4 +95,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/geda-gaf/geda-gaf.info b/academic/geda-gaf/geda-gaf.info
index 3664fa7fb5..7cb0caa577 100644
--- a/academic/geda-gaf/geda-gaf.info
+++ b/academic/geda-gaf/geda-gaf.info
@@ -1,10 +1,10 @@
PRGNAM="geda-gaf"
-VERSION="1.8.2"
+VERSION="1.10.2"
HOMEPAGE="http://www.geda-project.org/"
-DOWNLOAD="http://ftp.geda-project.org/geda-gaf/stable/v1.8/1.8.2/geda-gaf-1.8.2.tar.gz"
-MD5SUM="fa8a807615decf47027e22a217dd0ded"
+DOWNLOAD="http://ftp.geda-project.org/geda-gaf/stable/v1.10/1.10.2/geda-gaf-1.10.2.tar.gz"
+MD5SUM="39377764735bd4ce5360371614541a25"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES=""
+REQUIRES="guile2.2"
MAINTAINER="Stephen Van Berg"
EMAIL="stephen_van_berg@earlicker.com"
diff --git a/academic/gelemental/gelemental.SlackBuild b/academic/gelemental/gelemental.SlackBuild
index e4b332e18a..74eb6046b6 100644
--- a/academic/gelemental/gelemental.SlackBuild
+++ b/academic/gelemental/gelemental.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gelemental
-# Copyright 2011-2019 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gelemental
VERSION=${VERSION:-2.0.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -101,4 +111,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gelemental/gelemental.info b/academic/gelemental/gelemental.info
index 17d587816a..59fdeb15ae 100644
--- a/academic/gelemental/gelemental.info
+++ b/academic/gelemental/gelemental.info
@@ -1,6 +1,6 @@
PRGNAM="gelemental"
VERSION="2.0.0"
-HOMEPAGE="http://freecode.com/projects/gelemental"
+HOMEPAGE="https://github.com/ginggs/gelemental/"
DOWNLOAD="https://github.com/ginggs/gelemental/archive/v2.0.0/gelemental-2.0.0.tar.gz"
MD5SUM="8d38d7599b0f2fc96e2bd622cd762b9a"
DOWNLOAD_x86_64=""
diff --git a/academic/geneconv/README b/academic/geneconv/README
index 885f156f08..b759ef4c55 100644
--- a/academic/geneconv/README
+++ b/academic/geneconv/README
@@ -25,3 +25,8 @@ geneconv myfile.nex -nolog
CITING:
For references and citation information, check the documentation
folder of the package.
+
+NOTE!
+The program GENECONV is free for academic use, but commercial rights are
+reserved. The program may be freely distributed for academic use, as
+long as it is not altered or renamed.
diff --git a/academic/geneconv/geneconv.SlackBuild b/academic/geneconv/geneconv.SlackBuild
index 6deb7a5204..e3d01aa1bb 100644
--- a/academic/geneconv/geneconv.SlackBuild
+++ b/academic/geneconv/geneconv.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for geneconv
-# Copyright 2014-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2014-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,29 +22,39 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=geneconv
VERSION=${VERSION:-1.81a}
-BUILD=${BUILD:-2}
+BUILD=${BUILD:-3}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=unix.source
DOCNAM=unix.examples
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
elif [ "$ARCH" = "x86_64" ]; then
@@ -93,4 +103,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/genius/README b/academic/genius/README
index d4a270574c..fa2fa4b67b 100644
--- a/academic/genius/README
+++ b/academic/genius/README
@@ -7,5 +7,5 @@ or educational tool. The syntax is very intuitive and
is designed to mimic how mathematics is usually written.
If you would like the GUI interface as well, it requires
-libgnomeui and gtksourceview. If you have these dependencies,
+libgnomeui, gtksourceview and vte2. If you have these dependencies,
pass the variable of GNOME=YES (or anything that isn't NO ;)
diff --git a/academic/genius/genius.SlackBuild b/academic/genius/genius.SlackBuild
index b1a8669355..dd8974c60b 100644
--- a/academic/genius/genius.SlackBuild
+++ b/academic/genius/genius.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for genius
# Copyright 2009,2010,2018 Vincent Batts, vbatts@hashbangbash.com, http://hashbangbash.com/
@@ -22,10 +22,13 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=genius
VERSION=${VERSION:-1.0.23}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/genometools/gcc10.patch b/academic/genometools/gcc10.patch
new file mode 100644
index 0000000000..2c4edf1b74
--- /dev/null
+++ b/academic/genometools/gcc10.patch
@@ -0,0 +1,88 @@
+From 51205942b1f41abdf841771deac4e0e35d7d5016 Mon Sep 17 00:00:00 2001
+From: Sascha Steinbiss <satta@debian.org>
+Date: Wed, 22 Apr 2020 21:59:57 +0200
+Subject: [PATCH 1/2] make sure to not ignore snprintf output
+
+GCC 10 will warn about the (here intended) silent string truncation
+done by snprintf() unless the return value is handled.
+Obviously this will break the build as we use -Werror. We
+circumvent the problem by checking the output value and printing a
+warning if we notice a truncation.
+---
+ src/ltr/ltrdigest_file_out_stream.c | 17 ++++++++++++-----
+ 1 file changed, 12 insertions(+), 5 deletions(-)
+
+diff --git a/src/ltr/ltrdigest_file_out_stream.c b/src/ltr/ltrdigest_file_out_stream.c
+index 723b8cf9a..61325b693 100644
+--- a/src/ltr/ltrdigest_file_out_stream.c
++++ b/src/ltr/ltrdigest_file_out_stream.c
+@@ -1,5 +1,5 @@
+ /*
+- Copyright (c) 2008-2015 Sascha Steinbiss <sascha@steinbiss.name>
++ Copyright (c) 2008-2020 Sascha Steinbiss <sascha@steinbiss.name>
+ Copyright (c) 2008-2013 Center for Bioinformatics, University of Hamburg
+
+ Permission to use, copy, modify, and distribute this software for any
+@@ -33,6 +33,7 @@
+ #include "core/symbol.h"
+ #include "core/undef_api.h"
+ #include "core/unused_api.h"
++#include "core/warning_api.h"
+ #include "extended/extract_feature_sequence.h"
+ #include "extended/feature_node.h"
+ #include "extended/feature_node_iterator_api.h"
+@@ -416,6 +417,8 @@ int gt_ltrfileout_stream_next(GtNodeStream *ns, GtGenomeNode **gn, GtError *err)
+
+ if (!had_err) {
+ GtRange rng;
++ int ret = 0;
++
+ ls->element.seqid = gt_calloc((size_t) ls->seqnamelen+1, sizeof (char));
+ (void) snprintf(ls->element.seqid,
+ GT_MIN((size_t) gt_str_length(sdesc),
+@@ -425,12 +428,16 @@ int gt_ltrfileout_stream_next(GtNodeStream *ns, GtGenomeNode **gn, GtError *err)
+ if (gt_str_length(sdesc) > (GtUword) ls->seqnamelen)
+ ls->element.seqid[ls->seqnamelen] = '\0';
+
+- (void) gt_ltrelement_format_description(&ls->element,
+- ls->seqnamelen,
+- desc,
+- (size_t) (GT_MAXFASTAHEADER-1));
++ ret = gt_ltrelement_format_description(&ls->element,
++ ls->seqnamelen,
++ desc,
++ (size_t) (GT_MAXFASTAHEADER-1));
++ if (ret < 0) {
++ gt_warning("FASTA header truncated: %s", desc);
++ }
+ gt_str_delete(sdesc);
+
++
+ /* output basic retrotransposon data */
+ lltr_rng = gt_genome_node_get_range((GtGenomeNode*) ls->element.leftLTR);
+ rltr_rng = gt_genome_node_get_range((GtGenomeNode*) ls->element.rightLTR);
+
+From 30ae36037228dc4ed174e8462f3489638e6f5e76 Mon Sep 17 00:00:00 2001
+From: Sascha Steinbiss <satta@debian.org>
+Date: Wed, 22 Apr 2020 22:01:00 +0200
+Subject: [PATCH 2/2] declare hashmap type as extern
+
+This fixes a build issue with GCC 10.
+Closes #941.
+---
+ src/mgth/metagenomethreader.h | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/src/mgth/metagenomethreader.h b/src/mgth/metagenomethreader.h
+index 92f16d498..7f76fffb9 100644
+--- a/src/mgth/metagenomethreader.h
++++ b/src/mgth/metagenomethreader.h
+@@ -221,7 +221,7 @@ typedef struct
+ } ParseStruct;
+
+ /* specific access mode of queryhash */
+-DECLARE_HASHMAP(char *, gt_cstr_nofree, GtUword *, ulp,,)
++DECLARE_HASHMAP(char *, gt_cstr_nofree, GtUword *, ulp, extern,)
+ DECLARE_SAFE_DEREF(GtUword *, ulp)
+
+ /* Funktion, mit der der Metagenomethreader gestartet wird
diff --git a/academic/genometools/genometools.SlackBuild b/academic/genometools/genometools.SlackBuild
index 0814b7dc9e..9e55523524 100644
--- a/academic/genometools/genometools.SlackBuild
+++ b/academic/genometools/genometools.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for genometools
-# Copyright 2014-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2014-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=genometools
VERSION=${VERSION:-1.6.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -66,18 +76,29 @@ rm -rf $PRGNAM-$VERSION
tar xvf $CWD/$PRGNAM-$VERSION.tar.gz
cd $PRGNAM-$VERSION
chown -R root:root .
+
+# This is a looping symlink that the 'find' step below complains about.
+# The only thing that is used from this location is 'sam.h', so let's
+# just make a proper folder and copy it there.
+rm src/external/samtools-0.1.18/samtools
+mkdir -p src/external/samtools-0.1.18/samtools
+cp src/external/samtools-0.1.18/sam.h src/external/samtools-0.1.18/samtools
+
find -L . \
\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
-o -perm 511 \) -exec chmod 755 {} \; -o \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
- -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
+ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
+
+# Thanks Debian for the patch
+patch -p1 -i $CWD/gcc10.patch
# Fix library and man pages path
sed -i "s:lib/libgenometools:lib${LIBDIRSUFFIX}/libgenometools:g" Makefile
sed -i "s:\$(prefix)/lib:\$(prefix)/lib${LIBDIRSUFFIX}:g" Makefile
sed -i "s:/share/man/:/man/:g" Makefile
-CFLAGS="$SLKCFLAGS" \
+CFLAGS="$SLKCFLAGS -Wno-error=format-truncation=" \
CXXFLAGS="$SLKCFLAGS" \
make $BUILDARCH \
prefix=/usr
@@ -105,4 +126,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/genpak/genpak.SlackBuild b/academic/genpak/genpak.SlackBuild
index 9cf201f994..ca05fd25f3 100644
--- a/academic/genpak/genpak.SlackBuild
+++ b/academic/genpak/genpak.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for genpak
-# Copyright 2011-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,26 +22,36 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=genpak
VERSION=${VERSION:-0.26}
-BUILD=${BUILD:-4}
+BUILD=${BUILD:-6}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
@@ -64,16 +74,16 @@ tar xvf $CWD/gp-$VERSION.tgz
cd gp-$VERSION
chown -R root:root .
find -L . \
- \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 -o -perm 511 \) \
- -exec chmod 755 {} \; -o \
- \( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \
- -exec chmod 644 {} \;
+ \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
+ -o -perm 511 \) -exec chmod 755 {} \; -o \
+ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
+ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
# arch-independent data files belong in /usr/share:
sed -i "s,usr/lib/,usr/share/,g" src/* man1/* html/* *.TXT
make \
- CFLAGS="$SLKCFLAGS" \
+ CFLAGS="$SLKCFLAGS -fcommon" \
TREE=/usr \
BINDIR=/usr/bin \
DATADIR=/usr/share \
@@ -102,4 +112,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/geomview/geomview.SlackBuild b/academic/geomview/geomview.SlackBuild
index 23786322ec..b5205f067b 100644
--- a/academic/geomview/geomview.SlackBuild
+++ b/academic/geomview/geomview.SlackBuild
@@ -1,14 +1,17 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for geomview
# Written by (Jorge Barros de Abreu)
# (http://sites.google.com/site/ficmatinf)
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=geomview
VERSION=${VERSION:-1.9.4}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -18,7 +21,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -97,4 +107,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gerbv/gerbv.SlackBuild b/academic/gerbv/gerbv.SlackBuild
index 9b2e8a2576..c0dd769766 100644
--- a/academic/gerbv/gerbv.SlackBuild
+++ b/academic/gerbv/gerbv.SlackBuild
@@ -1,13 +1,16 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gerbv
# Written by Felix Pfeifer (pfeifer [dot] felix [at] googlemail [dot] com)
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gerbv
VERSION=${VERSION:-2.6.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -17,7 +20,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -83,5 +93,5 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/getdp/getdp.SlackBuild b/academic/getdp/getdp.SlackBuild
index 240d073028..edf57073d1 100644
--- a/academic/getdp/getdp.SlackBuild
+++ b/academic/getdp/getdp.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for getdp
# Copyright 2020 Fellype do Nascimento, Campinas, Brazil
@@ -20,10 +20,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=getdp
VERSION=${VERSION:-3.3.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -33,7 +36,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -106,4 +116,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ggobi/ggobi.SlackBuild b/academic/ggobi/ggobi.SlackBuild
index 849bbb432f..f951fc056c 100644
--- a/academic/ggobi/ggobi.SlackBuild
+++ b/academic/ggobi/ggobi.SlackBuild
@@ -1,13 +1,16 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ggobi
# Written by Pedro Mendes pedro@gepasi.org
# hereby put in the public domain
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ggobi
VERSION=${VERSION:-2.1.8}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -17,7 +20,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -85,4 +95,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ghemical/ghemical.SlackBuild b/academic/ghemical/ghemical.SlackBuild
index f1afe7370b..36ea7acff7 100644
--- a/academic/ghemical/ghemical.SlackBuild
+++ b/academic/ghemical/ghemical.SlackBuild
@@ -1,13 +1,16 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ghemical
# Written by Daniil Bratashov (dn2010@gmail.com)
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ghemical
VERSION=${VERSION:-3.0.0}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -17,7 +20,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -89,4 +99,4 @@ mkdir -p $PKG/usr/share/icons/hicolor/48x48/apps
cp $CWD/ghemical.png $PKG/usr/share/icons/hicolor/48x48/apps
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/glpk/glpk.SlackBuild b/academic/glpk/glpk.SlackBuild
index 140eae9aa1..8d67f2a0d2 100644
--- a/academic/glpk/glpk.SlackBuild
+++ b/academic/glpk/glpk.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for glpk
# Ryan P.C. McQuen | Everett, WA | ryanpcmcquen@member.fsf.org
@@ -24,10 +24,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=glpk
VERSION=${VERSION:-4.61}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -100,4 +110,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gmsh/gmsh.SlackBuild b/academic/gmsh/gmsh.SlackBuild
index 3632982bf4..32d8a75d81 100644
--- a/academic/gmsh/gmsh.SlackBuild
+++ b/academic/gmsh/gmsh.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gmsh
# Copyright 2020 Fellype do Nascimento, Campinas, Brazil
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gmsh
VERSION=${VERSION:-4.5.4}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -112,4 +122,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gnucap/gnucap.SlackBuild b/academic/gnucap/gnucap.SlackBuild
index a350ac9121..2cbcce0492 100644
--- a/academic/gnucap/gnucap.SlackBuild
+++ b/academic/gnucap/gnucap.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Gnucap
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gnucap
VERSION=${VERSION:-20091207}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCVER="$( echo $VERSION | sed 's|\(....\)\(..\)\(..\)|\1-\2-\3|' )"
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -121,4 +131,4 @@ StartupNotify=true
EOF
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gp2fasta/gp2fasta.SlackBuild b/academic/gp2fasta/gp2fasta.SlackBuild
index ade5c82653..d9e0168c2f 100644
--- a/academic/gp2fasta/gp2fasta.SlackBuild
+++ b/academic/gp2fasta/gp2fasta.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gp2fasta
@@ -26,10 +26,13 @@
# http://kde-look.org/content/show.php/Fasta+icons?content=54012
# Author is Luis-Miguel Rodriguez. Thank you!
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gp2fasta
VERSION=${VERSION:-0.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -39,7 +42,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -107,4 +117,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gpredict/gpredict.SlackBuild b/academic/gpredict/gpredict.SlackBuild
index b3e4f352d8..bcef232014 100644
--- a/academic/gpredict/gpredict.SlackBuild
+++ b/academic/gpredict/gpredict.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gpredict
# Yth | Pont-en-Royans, France | yth@ythogtha.org
@@ -23,10 +23,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gpredict
VERSION=${VERSION:-2.3}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -70,11 +80,9 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
-./autogen.sh
-
-CFLAGS="$SLKCFLAGS" \
+CFLAGS="$SLKCFLAGS -w -Wl,--allow-multiple-definition" \
CXXFLAGS="$SLKCFLAGS" \
-./configure \
+./autogen.sh \
--prefix=/usr \
--libdir=/usr/lib${LIBDIRSUFFIX} \
--sysconfdir=/etc \
@@ -104,4 +112,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/grace/grace.SlackBuild b/academic/grace/grace.SlackBuild
index a4005d50b9..008415e106 100644
--- a/academic/grace/grace.SlackBuild
+++ b/academic/grace/grace.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for grace
@@ -23,10 +23,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=grace
VERSION=${VERSION:-5.1.25}
BUILD=${BUILD:-1}
TAG=${TAG:-"_SBo"}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-"/tmp/SBo"}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-"/tmp"}
@@ -123,4 +133,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gresistor/gresistor.SlackBuild b/academic/gresistor/gresistor.SlackBuild
index a6e2f24a3e..7271b8c13d 100644
--- a/academic/gresistor/gresistor.SlackBuild
+++ b/academic/gresistor/gresistor.SlackBuild
@@ -1,12 +1,15 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gresistor
# Written by Erwin van Zanten <e.van.zanten.evz@gmail.com>
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gresistor
VERSION=${VERSION:-0.0.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -16,7 +19,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -70,4 +80,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gretl/gretl.SlackBuild b/academic/gretl/gretl.SlackBuild
index 2092c45699..43cf7a8c8c 100644
--- a/academic/gretl/gretl.SlackBuild
+++ b/academic/gretl/gretl.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Gretl
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gretl
VERSION=${VERSION:-2017c}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -119,4 +129,4 @@ Categories=Education
EOF
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gretl/gretl.info b/academic/gretl/gretl.info
index d2e95b62f3..6e21f6923f 100644
--- a/academic/gretl/gretl.info
+++ b/academic/gretl/gretl.info
@@ -9,6 +9,6 @@ MD5SUM="a785bbdbfce1306a2366235b5659e289 \
f8f058a9b43db33bedefedee4bf461d4"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="gtksourceview3 json-glib lapack unixODBC"
+REQUIRES="lapack unixODBC"
MAINTAINER="R. S. Ananda Murthy"
EMAIL="rsamurti@gmail.com"
diff --git a/academic/gri/gri.SlackBuild b/academic/gri/gri.SlackBuild
index 965946ecd2..baa6a4e266 100644
--- a/academic/gri/gri.SlackBuild
+++ b/academic/gri/gri.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gri
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gri
VERSION=${VERSION:-2.12.23}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -114,4 +124,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/grpn/grpn.SlackBuild b/academic/grpn/grpn.SlackBuild
index 43d21124e1..1c44619689 100644
--- a/academic/grpn/grpn.SlackBuild
+++ b/academic/grpn/grpn.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for grpn
@@ -6,10 +6,13 @@
# Released into the public domain June 6, 2009
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=grpn
VERSION=${VERSION:-1.1.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -19,7 +22,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -76,4 +86,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gspiceui/gspiceui.SlackBuild b/academic/gspiceui/gspiceui.SlackBuild
index 5855a4a05e..c00b034973 100644
--- a/academic/gspiceui/gspiceui.SlackBuild
+++ b/academic/gspiceui/gspiceui.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Gspiceui
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gspiceui
VERSION=${VERSION:-1.2.36}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -95,4 +105,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gtkwave/gtkwave.SlackBuild b/academic/gtkwave/gtkwave.SlackBuild
index 2fe435439c..c6b008729b 100644
--- a/academic/gtkwave/gtkwave.SlackBuild
+++ b/academic/gtkwave/gtkwave.SlackBuild
@@ -1,12 +1,15 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Icarus Verilog compiler
# Written by Stephen Van Berg stephen_van_berg@earlicker.com.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gtkwave
VERSION=${VERSION:-3.3.51}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -16,7 +19,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -93,4 +103,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gtypist/gtypist.SlackBuild b/academic/gtypist/gtypist.SlackBuild
index 73df0f076f..49e7087d86 100644
--- a/academic/gtypist/gtypist.SlackBuild
+++ b/academic/gtypist/gtypist.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gtypist
# Copyright 2007-2012 Grigorios Bouzakis <grbzks@imap.cc>
@@ -20,10 +20,13 @@
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF
# THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gtypist
VERSION=${VERSION:-2.9.5}
BUILD=${BUILD:-3}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -33,7 +36,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -106,4 +116,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/gwyddion/README b/academic/gwyddion/README
index 6821f7110c..f54770136f 100644
--- a/academic/gwyddion/README
+++ b/academic/gwyddion/README
@@ -4,4 +4,4 @@ height fields obtained by means of scanning probe microscopy techniques
(AFM, MFM, STM, SNOM/NSOM), however it can be generally used for any
other height field and image analysis.
-libminizip, libwebp and cfitsio are the optional dependencies.
+libminizip is an optional dependency.
diff --git a/academic/gwyddion/gwyddion.SlackBuild b/academic/gwyddion/gwyddion.SlackBuild
index 0af5356e82..a5e2e2c36e 100644
--- a/academic/gwyddion/gwyddion.SlackBuild
+++ b/academic/gwyddion/gwyddion.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for gwyddion
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=gwyddion
VERSION=${VERSION:-2.58}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -97,4 +107,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/h5utils/h5utils.SlackBuild b/academic/h5utils/h5utils.SlackBuild
index 1f85355f30..030abacf28 100644
--- a/academic/h5utils/h5utils.SlackBuild
+++ b/academic/h5utils/h5utils.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for h5utils
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=h5utils
VERSION=${VERSION:-1.13.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -111,4 +121,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/harminv/harminv.SlackBuild b/academic/harminv/harminv.SlackBuild
index 34d85f200d..2dbbcbc71d 100644
--- a/academic/harminv/harminv.SlackBuild
+++ b/academic/harminv/harminv.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for harminv
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=harminv
VERSION=${VERSION:-1.4.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -109,4 +119,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/hyphy/hyphy.SlackBuild b/academic/hyphy/hyphy.SlackBuild
index e22cf3435a..954ebd08dd 100644
--- a/academic/hyphy/hyphy.SlackBuild
+++ b/academic/hyphy/hyphy.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for hyphy
-# Copyright 2017-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=hyphy
-VERSION=${VERSION:-2.3.14}
+VERSION=${VERSION:-2.5.31}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -71,11 +81,18 @@ find -L . \
# Fix the libraries path on 64 systems and use our compiler flags
sed -i "s:lib/hyphy:lib${LIBDIRSUFFIX}/hyphy:g" CMakeLists.txt
-sed -i "s:-msse3:$SLKCFLAGS:g" CMakeLists.txt
-sed -i "s:-march=corei7-avx -mtune=corei7-avx:$SLKCFLAGS:g" CMakeLists.txt
-sed -i "s:-mno-avx:$SLKCFLAGS:g" CMakeLists.txt
-sed -i "s:-mno-sse3:$SLKCFLAGS:g" CMakeLists.txt
-sed -i "s:-fsigned-char -O3:$SLKCFLAGS:g" CMakeLists.txt
+
+# Use our flags
+sed -i "s:-fsigned-char -O3:$SLKCFLAGS -fsigned-char:g" CMakeLists.txt
+
+# Use _only_ our flags. You may wish to comment out the lines below to
+# enable flags automatically set for you architecture.
+sed -i "s:-march=native -mtune=native -mavx::g" CMakeLists.txt
+sed -i "s:-mavx::g" CMakeLists.txt
+sed -i "s:-mfma::g" CMakeLists.txt
+sed -i "s:-msse3::g" CMakeLists.txt
+sed -i "s:-mno-avx::g" CMakeLists.txt
+sed -i "s:-mno-sse3::g" CMakeLists.txt
mkdir -p build
cd build
@@ -93,12 +110,8 @@ cd ..
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
-# Include a few examples
-mkdir -p $PKG/usr/share/$PRGNAM
-cp -a Examples $PKG/usr/share/$PRGNAM
-
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
-cp -a help/*.pdf LICENSE README.md $PKG/usr/doc/$PRGNAM-$VERSION
+cp -a LICENSE README.md CONTRIBUTING.md $PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
cat $CWD/References > $PKG/usr/doc/$PRGNAM-$VERSION/References
@@ -106,4 +119,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/hyphy/hyphy.info b/academic/hyphy/hyphy.info
index 33786b6d6c..440a4e7e1d 100644
--- a/academic/hyphy/hyphy.info
+++ b/academic/hyphy/hyphy.info
@@ -1,8 +1,8 @@
PRGNAM="hyphy"
-VERSION="2.3.14"
+VERSION="2.5.31"
HOMEPAGE="https://veg.github.io/hyphy-site/"
-DOWNLOAD="https://github.com/veg/hyphy/archive/2.3.14/hyphy-2.3.14.tar.gz"
-MD5SUM="d82809929d213e236078ed4853ea3962"
+DOWNLOAD="https://github.com/veg/hyphy/archive/2.5.31/hyphy-2.5.31.tar.gz"
+MD5SUM="f4d6e48aa47b657810e29dacf183860b"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="openmpi"
diff --git a/academic/iTest/iTest.SlackBuild b/academic/iTest/iTest.SlackBuild
index 4d1fb23da1..a569a2df93 100644
--- a/academic/iTest/iTest.SlackBuild
+++ b/academic/iTest/iTest.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for iTest
@@ -22,11 +22,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=iTest
VERSION=${VERSION:-1.4.2_PREVIEW4}
SRCVER=$(echo $VERSION | tr _ -)
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -137,4 +147,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/io_lib/io_lib.SlackBuild b/academic/io_lib/io_lib.SlackBuild
index 9a6f5a76d6..6821bcde97 100644
--- a/academic/io_lib/io_lib.SlackBuild
+++ b/academic/io_lib/io_lib.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for io_lib
-# Copyright 2011-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=io_lib
-VERSION=${VERSION:-1.14.13}
+VERSION=${VERSION:-1.14.14}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -99,4 +109,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/io_lib/io_lib.info b/academic/io_lib/io_lib.info
index 246c55cff8..9a1928285e 100644
--- a/academic/io_lib/io_lib.info
+++ b/academic/io_lib/io_lib.info
@@ -1,8 +1,8 @@
PRGNAM="io_lib"
-VERSION="1.14.13"
+VERSION="1.14.14"
HOMEPAGE="https://github.com/jkbonfield/io_lib"
-DOWNLOAD="https://github.com/jkbonfield/io_lib/releases/download/io_lib-1-14-13/io_lib-1.14.13.tar.gz"
-MD5SUM="5b15a68b9dac242a4e5c83900e330d7d"
+DOWNLOAD="https://github.com/jkbonfield/io_lib/releases/download/io_lib-1-14-14/io_lib-1.14.14.tar.gz"
+MD5SUM="fb2d897709d567f257445306e0f5a781"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/irsim/irsim.SlackBuild b/academic/irsim/irsim.SlackBuild
index 898c8c00dc..689040de0d 100644
--- a/academic/irsim/irsim.SlackBuild
+++ b/academic/irsim/irsim.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for IRSIM
# Written by Mauricio Martinez <eigenfilter {at} gmail [dot] com>
@@ -14,10 +14,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=irsim
VERSION=${VERSION:-9.7.94}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -27,7 +30,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -89,4 +99,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/isoelectric-point/isoelectric-point.SlackBuild b/academic/isoelectric-point/isoelectric-point.SlackBuild
index dc96c2f792..93c39e2074 100644
--- a/academic/isoelectric-point/isoelectric-point.SlackBuild
+++ b/academic/isoelectric-point/isoelectric-point.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for isoelectrick-point
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=isoelectric-point
VERSION=${VERSION:-1.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -101,4 +111,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/itex2mml/itex2mml.SlackBuild b/academic/itex2mml/itex2mml.SlackBuild
index 6b7423ba23..26f11ba992 100644
--- a/academic/itex2mml/itex2mml.SlackBuild
+++ b/academic/itex2mml/itex2mml.SlackBuild
@@ -1,13 +1,16 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for itex2mml
# Written by David Matthew Jerry Koenig <koenigdavidmj@gmail.com>
# Public domain.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=itex2mml
VERSION=${VERSION:-1.5.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -17,7 +20,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -85,5 +95,5 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/jalview/jalview.SlackBuild b/academic/jalview/jalview.SlackBuild
index 30d2cdbe8f..6bdf1a487d 100644
--- a/academic/jalview/jalview.SlackBuild
+++ b/academic/jalview/jalview.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for jalview
-# Copyright 2013-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,16 +22,26 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=jalview
-VERSION=${VERSION:-2.11.1.0}
+VERSION=${VERSION:-2.11.1.4}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ARCH=noarch
JAVA=j1.8
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -59,4 +69,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/jalview/jalview.info b/academic/jalview/jalview.info
index 499422a4d6..cdcb70e3d9 100644
--- a/academic/jalview/jalview.info
+++ b/academic/jalview/jalview.info
@@ -1,10 +1,10 @@
PRGNAM="jalview"
-VERSION="2.11.1.0"
+VERSION="2.11.1.4"
HOMEPAGE="http://www.jalview.org/"
-DOWNLOAD="http://www.jalview.org/getdown/release/jalview-all-2.11.1.0-j1.8.jar"
-MD5SUM="7f79b598a5bfd25d89adf6fe8c9b98f7"
+DOWNLOAD="http://www.jalview.org/getdown/release/jalview-all-2.11.1.4-j1.8.jar"
+MD5SUM="725915975f65ce4ae5570578e68d1b03"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="jdk"
+REQUIRES="adoptopenjdk"
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/jellyfish_k-mer/jellyfish_k-mer.SlackBuild b/academic/jellyfish_k-mer/jellyfish_k-mer.SlackBuild
index e2f2db0ffa..67282200e2 100644
--- a/academic/jellyfish_k-mer/jellyfish_k-mer.SlackBuild
+++ b/academic/jellyfish_k-mer/jellyfish_k-mer.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for jellyfish
-# Copyright 2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2018-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=jellyfish_k-mer
VERSION=${VERSION:-1.1.12}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=jellyfish
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -101,4 +111,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/jpicedt/jpicedt.SlackBuild b/academic/jpicedt/jpicedt.SlackBuild
index 66402404c9..0de293eb4b 100644
--- a/academic/jpicedt/jpicedt.SlackBuild
+++ b/academic/jpicedt/jpicedt.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Copyright 2008 Robert Allen - slacker@slaphappygeeks.com
# All rights reserved including Creator Endowed Unalienable Rights.
@@ -20,10 +20,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=jpicedt
VERSION=${VERSION:-1.4.1_03}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -33,7 +36,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -84,4 +94,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
chown -R root:root .
-/sbin/makepkg -c n -l y $OUTPUT/${PRGNAM}-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -c n -l y $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/jugglinglab/jugglinglab.SlackBuild b/academic/jugglinglab/jugglinglab.SlackBuild
index a43b2b0b0c..1320dcd5da 100644
--- a/academic/jugglinglab/jugglinglab.SlackBuild
+++ b/academic/jugglinglab/jugglinglab.SlackBuild
@@ -1,17 +1,27 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Juggling Lab
# Petr Kletecka admin@zonglovani.info <2014>
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=jugglinglab
VERSION=${VERSION:-0.6.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
ARCH=noarch
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -46,4 +56,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/karma/karma.SlackBuild b/academic/karma/karma.SlackBuild
index ff1ae1b500..338f9117a5 100644
--- a/academic/karma/karma.SlackBuild
+++ b/academic/karma/karma.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for karma
@@ -23,10 +23,13 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=karma
VERSION=${VERSION:-1.7.25}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -113,4 +123,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/kile/README b/academic/kile/README
deleted file mode 100644
index d083e911fe..0000000000
--- a/academic/kile/README
+++ /dev/null
@@ -1,4 +0,0 @@
-To build Kile, you will need a Latex distribution like TeTeX or
-Tex-Live. Slackware 13.0 (and lower) include the former distribution
-and it is available on the installation disk(s) if you did not do a
-full install.
diff --git a/academic/kile/doinst.sh b/academic/kile/doinst.sh
deleted file mode 100644
index aea0f894eb..0000000000
--- a/academic/kile/doinst.sh
+++ /dev/null
@@ -1,13 +0,0 @@
-if [ -x /usr/bin/update-desktop-database ]; then
- /usr/bin/update-desktop-database -q usr/share/applications >/dev/null 2>&1
-fi
-
-if [ -x /usr/bin/update-mime-database ]; then
- /usr/bin/update-mime-database usr/share/mime >/dev/null 2>&1
-fi
-
-if [ -e usr/share/icons/hicolor/icon-theme.cache ]; then
- if [ -x /usr/bin/gtk-update-icon-cache ]; then
- /usr/bin/gtk-update-icon-cache -f usr/share/icons/hicolor >/dev/null 2>&1
- fi
-fi
diff --git a/academic/kile/kile.info b/academic/kile/kile.info
deleted file mode 100644
index edc969bd33..0000000000
--- a/academic/kile/kile.info
+++ /dev/null
@@ -1,10 +0,0 @@
-PRGNAM="kile"
-VERSION="2.1.3"
-HOMEPAGE="http://kile.sourceforge.net/"
-DOWNLOAD="http://downloads.sourceforge.net/kile/kile-2.1.3.tar.bz2"
-MD5SUM="f3129e73eea21890c40781de80b44808"
-DOWNLOAD_x86_64=""
-MD5SUM_x86_64=""
-REQUIRES=""
-MAINTAINER="Heinz Wiesinger"
-EMAIL="pprkut@liwjatan.at"
diff --git a/academic/kile/slack-desc b/academic/kile/slack-desc
deleted file mode 100644
index a98e5da34c..0000000000
--- a/academic/kile/slack-desc
+++ /dev/null
@@ -1,19 +0,0 @@
-# HOW TO EDIT THIS FILE:
-# The "handy ruler" below makes it easier to edit a package description.
-# Line up the first '|' above the ':' following the base package name, and
-# the '|' on the right side marks the last column you can put a character in.
-# You must make exactly 11 lines for the formatting to be correct. It's also
-# customary to leave one space after the ':' except on otherwise blank lines.
-
- |-----handy-ruler------------------------------------------------------|
-kile: kile (Latex editor)
-kile:
-kile: Kile is a user friendly TeX/LaTeX editor for the KDE
-kile: desktop environment.
-kile: This package is a Beta version for use with KDE 4.
-kile:
-kile: Homepage: http://kile.sourceforge.net/
-kile: License: GNU General Public License v2
-kile:
-kile:
-kile:
diff --git a/academic/kiwisolver/kiwisolver.SlackBuild b/academic/kiwisolver/kiwisolver.SlackBuild
index 06b213b486..a8642e3de6 100644
--- a/academic/kiwisolver/kiwisolver.SlackBuild
+++ b/academic/kiwisolver/kiwisolver.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for kiwisolver
@@ -23,10 +23,13 @@
# IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
# POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=kiwisolver
VERSION=${VERSION:-1.0.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=${PKG:-$TMP/package-$PRGNAM}
OUTPUT=${OUTPUT:-/tmp}
@@ -69,4 +79,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/klavaro/klavaro.SlackBuild b/academic/klavaro/klavaro.SlackBuild
index 2ad1b51b30..1c841bc66c 100644
--- a/academic/klavaro/klavaro.SlackBuild
+++ b/academic/klavaro/klavaro.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Klavaro
@@ -23,10 +23,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=klavaro
VERSION=${VERSION:-3.03}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -101,4 +111,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/klu/klu.SlackBuild b/academic/klu/klu.SlackBuild
index cff38308c6..be1af5591a 100644
--- a/academic/klu/klu.SlackBuild
+++ b/academic/klu/klu.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for KLU
@@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=klu
SRCNAM=SuiteSparse
SUBDIR=KLU
@@ -29,6 +31,7 @@ VERSION=${VERSION:-1.3.9}
SRCVER=${SRCVER:-5.8.1}
BUILD=${BUILD:-4}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -108,4 +118,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/knime/knime.SlackBuild b/academic/knime/knime.SlackBuild
index 2f9736914f..7180e12bdb 100644
--- a/academic/knime/knime.SlackBuild
+++ b/academic/knime/knime.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for knime
# Copyright 2014 Stephen Van Berg USA
@@ -23,10 +23,13 @@
# Stephen Van Berg 2014-4-17
# Updated 2015-07-31 for knime version 2.12.0
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=knime
VERSION=${VERSION:-2.12.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -79,4 +89,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/kraken/kraken.SlackBuild b/academic/kraken/kraken.SlackBuild
index ab71cb0f0c..4cd7d07008 100644
--- a/academic/kraken/kraken.SlackBuild
+++ b/academic/kraken/kraken.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for kraken
-# Copyright 2018-2019 Petar Petrov slackalaxy@gmail.com
+# Copyright 2018-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=kraken
VERSION=${VERSION:-1.1.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -98,4 +108,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ktikz/ktikz.SlackBuild b/academic/ktikz/ktikz.SlackBuild
index 71c10fef06..12d7b45435 100644
--- a/academic/ktikz/ktikz.SlackBuild
+++ b/academic/ktikz/ktikz.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ktikz
-# Copyright 2012 Giorgio Peron Campodarsego, PD, Italy
+# Copyright 2021 Giorgio Peron <giorgio.peron@gmail.com> Belluno Italy
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -23,26 +23,36 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ktikz
-VERSION=${VERSION:-0.10}
+VERSION=${VERSION:-0.13.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
@@ -63,36 +73,46 @@ set -e
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
-rm -rf $PRGNAM
-tar xvzf $CWD/$PRGNAM\_$VERSION.tar.gz
-cd $PRGNAM
+rm -rf $PRGNAM-$VERSION
+tar xvzf $CWD/$PRGNAM-$VERSION.tar.gz
+cd $PRGNAM-$VERSION
chown -R root:root .
find -L . \
- \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 -o -perm 511 \) \
- -exec chmod 755 {} \; -o \
- \( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \
- -exec chmod 644 {} \;
-
-# Comedy sed command thanks to Arch :-)
-sed -e 's|\\\\\\||g' -i app/CMakeLists.txt
-
-cmake \
+ \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
+ -o -perm 511 \) -exec chmod 755 {} \; -o \
+ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
+ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
+
+mkdir -p build{,qt}
+cd build
+cmake .. \
-DCMAKE_C_FLAGS="$SLKCFLAGS" \
-DCMAKE_CXX_FLAGS="$SLKCFLAGS" \
- -DCMAKE_INSTALL_PREFIX=`kde4-config --prefix` \
+ -DCMAKE_INSTALL_PREFIX=/usr \
-DCMAKE_BUILD_TYPE=Release
make
+cd -
+cd buildqt
+qmake ../qtikz.pro
+make
+cd -
+cd build
make install DESTDIR=$PKG
+cd -
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
+mkdir -p $PKG/usr
+mv $PKG/usr/share/man $PKG/usr/
find $PKG/usr/man -type f -exec gzip -9 {} \;
for i in $( find $PKG/usr/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
+mv $PKG/usr/share/doc/* $PKG/usr/doc/$PRGNAM-$VERSION/
+rm -rf $PKG/usr/share/doc
cp -a \
- Changelog HACKING INSTALL LICENSE.GPL2 README TODO \
+ Changelog HACKING INSTALL LICENSE.* README.md TODO \
$PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
@@ -101,4 +121,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ktikz/ktikz.info b/academic/ktikz/ktikz.info
index 888176171c..674d966100 100644
--- a/academic/ktikz/ktikz.info
+++ b/academic/ktikz/ktikz.info
@@ -1,8 +1,8 @@
PRGNAM="ktikz"
-VERSION="0.10"
+VERSION="0.13.2"
HOMEPAGE="http://www.hackenberger.at/blog/ktikz-editor-for-the-tikz-language/"
-DOWNLOAD="http://www.hackenberger.at/ktikz/ktikz_0.10.tar.gz"
-MD5SUM="e8f0826cba2447250bcdcd389a71a2ac"
+DOWNLOAD="https://github.com/fhackenberger/ktikz/archive/0.13.2/ktikz-0.13.2.tar.gz"
+MD5SUM="26cb3537bc5fd501bd37d4ba80a06260"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/kurso/kurso.SlackBuild b/academic/kurso/kurso.SlackBuild
index 13c5777a81..5f762d4b83 100644
--- a/academic/kurso/kurso.SlackBuild
+++ b/academic/kurso/kurso.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for kurso
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=kurso
VERSION=${VERSION:-4.1.2}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCTARNAM=kurso4_source
SRCNAM=kurso4
BINTARNAM=kurso.i386
@@ -39,7 +42,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -136,4 +146,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/labplot2/README b/academic/labplot2/README
index d34496e452..ae07007ac1 100644
--- a/academic/labplot2/README
+++ b/academic/labplot2/README
@@ -15,8 +15,5 @@ are several new features that were not available in LabPlot1.
optional dependencies:
-- LaTeX (to enable LaTeX typesetting in LabPlot)
-- fftw
- hdf5
- netcdf
-- cfitsio
diff --git a/academic/labplot2/labplot2.SlackBuild b/academic/labplot2/labplot2.SlackBuild
index f10f2442bc..c1da77ddf7 100644
--- a/academic/labplot2/labplot2.SlackBuild
+++ b/academic/labplot2/labplot2.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
#
# Slackware build script for LabPlot
# Based on the Slackware 14.1 SlackBuild and AUR PKGBUILD for labplot
@@ -22,10 +22,13 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
NAME=labplot
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=labplot2
VERSION=${VERSION:-2.4.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -90,5 +100,5 @@ if [ -e /usr/bin/requiredbuilder ]; then
fi
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/labplot2/labplot2.info b/academic/labplot2/labplot2.info
index b9af5858f7..cf80183dd6 100644
--- a/academic/labplot2/labplot2.info
+++ b/academic/labplot2/labplot2.info
@@ -5,6 +5,6 @@ DOWNLOAD="http://kde.c3sl.ufpr.br/stable/labplot/2.4.0/labplot-2.4.0.tar.xz"
MD5SUM="ee59c0095190bb3dc100e29e1a00c654"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="extra-cmake-modules"
+REQUIRES=""
MAINTAINER="Fellype do Nascimento"
EMAIL="fellype(at)gmail.com"
diff --git a/academic/ladr/ladr.SlackBuild b/academic/ladr/ladr.SlackBuild
index 1a8d75236a..f7da65f1ef 100644
--- a/academic/ladr/ladr.SlackBuild
+++ b/academic/ladr/ladr.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ladr
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ladr
VERSION=${VERSION:-2009_11A}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -107,4 +117,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ladr/ladr.info b/academic/ladr/ladr.info
index ce229f3444..2754652ed5 100644
--- a/academic/ladr/ladr.info
+++ b/academic/ladr/ladr.info
@@ -7,4 +7,4 @@ DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
MAINTAINER="Heinz Wiesinger"
-EMAIL="pprkut@liwjatan.at"
+EMAIL="pprkut@slackbuilds.org"
diff --git a/academic/lalnview/lalnview.SlackBuild b/academic/lalnview/lalnview.SlackBuild
index 3ba95c44d5..7e2e1cfa44 100644
--- a/academic/lalnview/lalnview.SlackBuild
+++ b/academic/lalnview/lalnview.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for lalnview
-# Copyright 2011-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -24,10 +24,13 @@
# Thanks to Niels Horn for correcting the CFLAGS.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=lalnview
VERSION=${VERSION:-3.0}
BUILD=${BUILD:-3}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCTAR=sources20050615.tar
@@ -39,7 +42,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -98,4 +108,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/lapack95/lapack95.SlackBuild b/academic/lapack95/lapack95.SlackBuild
index 92c1139843..8d970095c7 100644
--- a/academic/lapack95/lapack95.SlackBuild
+++ b/academic/lapack95/lapack95.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for lapack95
@@ -23,10 +23,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=lapack95
VERSION=${VERSION:-3.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -104,4 +114,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/lapacke/README b/academic/lapacke/README
index 892bc75de9..118c2449de 100644
--- a/academic/lapacke/README
+++ b/academic/lapacke/README
@@ -6,5 +6,7 @@ This package is intended for use with the Netlib reference LAPACK.
It should also work with other LAPACK implementations that do not
already provide a LAPACKE implementation.
+xblas is an optional dependency.
+
To build a static library in addition to the shared library, pass
STATIC=yes to the script.
diff --git a/academic/lapacke/lapacke.SlackBuild b/academic/lapacke/lapacke.SlackBuild
index e0c9fe36d0..a79404abf2 100644
--- a/academic/lapacke/lapacke.SlackBuild
+++ b/academic/lapacke/lapacke.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for LAPACKE
-# Copyright 2016-2020 Kyle Guinn <elyk03@gmail.com>
+# Copyright 2016-2021 Kyle Guinn <elyk03@gmail.com>
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,11 +22,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=lapacke
SRCNAM=lapack
-VERSION=${VERSION:-3.9.0}
+VERSION=${VERSION:-3.9.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -69,6 +79,10 @@ chmod -R u+w,go-w,a+rX-st .
# Allow building only the LAPACKE component.
patch -p1 < $CWD/patches/cmake-piecewise.diff
+if pkg-config --exists xblas; then
+ use_xblas='-DUSE_XBLAS=ON'
+fi
+
# Avoid adding an RPATH entry to the shared lib. It's unnecessary (except for
# running the test suite), and it's broken on 64-bit (needs LIBDIRSUFFIX).
mkdir -p shared
@@ -82,6 +96,7 @@ cd shared
-DUSE_OPTIMIZED_LAPACK=ON \
-DBUILD_LAPACKE=ON \
-DBUILD_DEPRECATED=ON \
+ $use_xblas \
-DBUILD_SHARED_LIBS=ON \
-DCMAKE_SKIP_RPATH=YES \
..
@@ -104,6 +119,7 @@ if [ "${STATIC:-no}" != "no" ]; then
-DUSE_OPTIMIZED_LAPACK=ON \
-DBUILD_LAPACKE=ON \
-DBUILD_DEPRECATED=ON \
+ $use_xblas \
..
make
make install/strip DESTDIR=$PKG
@@ -118,4 +134,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/lapacke/lapacke.info b/academic/lapacke/lapacke.info
index d674e494bd..aa77adac19 100644
--- a/academic/lapacke/lapacke.info
+++ b/academic/lapacke/lapacke.info
@@ -1,8 +1,8 @@
PRGNAM="lapacke"
-VERSION="3.9.0"
+VERSION="3.9.1"
HOMEPAGE="https://www.netlib.org/lapack/lapacke.html"
-DOWNLOAD="https://github.com/Reference-LAPACK/lapack/archive/v3.9.0/lapack-3.9.0.tar.gz"
-MD5SUM="0b251e2a8d5f949f99b50dd5e2200ee2"
+DOWNLOAD="https://github.com/Reference-LAPACK/lapack/archive/v3.9.1/lapack-3.9.1.tar.gz"
+MD5SUM="47ab2d11652045145df37ddbe2a32d71"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="lapack"
diff --git a/academic/lapacke/patches/cmake-piecewise.diff b/academic/lapacke/patches/cmake-piecewise.diff
index b1bdfaec1e..378acc8769 100644
--- a/academic/lapacke/patches/cmake-piecewise.diff
+++ b/academic/lapacke/patches/cmake-piecewise.diff
@@ -5,25 +5,25 @@ diff --git a/CBLAS/CMakeLists.txt b/CBLAS/CMakeLists.txt
message(STATUS "CBLAS enable")
enable_language(C)
--set(LAPACK_INSTALL_EXPORT_NAME cblas-targets)
+-set(LAPACK_INSTALL_EXPORT_NAME ${CBLASLIB}-targets)
-
# Create a header file cblas.h for the routines called in my C programs
include(FortranCInterface)
## Ensure that the fortran compiler and c compiler specified are compatible
-@@ -41,54 +39,8 @@
+@@ -45,54 +43,8 @@
add_subdirectory(examples)
endif()
-if(NOT BLAS_FOUND)
-- set(ALL_TARGETS ${ALL_TARGETS} blas)
+- set(ALL_TARGETS ${ALL_TARGETS} ${BLASLIB})
-endif()
-
-# Export cblas targets from the
-# install tree, if any.
-set(_cblas_config_install_guard_target "")
-if(ALL_TARGETS)
-- install(EXPORT cblas-targets
-- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/cblas-${LAPACK_VERSION}
+- install(EXPORT ${CBLASLIB}-targets
+- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${CBLASLIB}-${LAPACK_VERSION}
- COMPONENT Development
- )
- # Choose one of the cblas targets to use as a guard for
@@ -34,7 +34,7 @@ diff --git a/CBLAS/CMakeLists.txt b/CBLAS/CMakeLists.txt
-# Export cblas targets from the build tree, if any.
-set(_cblas_config_build_guard_target "")
-if(ALL_TARGETS)
-- export(TARGETS ${ALL_TARGETS} FILE cblas-targets.cmake)
+- export(TARGETS ${ALL_TARGETS} FILE ${CBLASLIB}-targets.cmake)
-
- # Choose one of the cblas targets to use as a guard
- # for cblas-config.cmake to load targets from the build tree.
@@ -42,27 +42,27 @@ diff --git a/CBLAS/CMakeLists.txt b/CBLAS/CMakeLists.txt
-endif()
-
-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cmake/cblas-config-version.cmake.in
-- ${LAPACK_BINARY_DIR}/cblas-config-version.cmake @ONLY)
+- ${LAPACK_BINARY_DIR}/${CBLASLIB}-config-version.cmake @ONLY)
-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cmake/cblas-config-build.cmake.in
-- ${LAPACK_BINARY_DIR}/cblas-config.cmake @ONLY)
+- ${LAPACK_BINARY_DIR}/${CBLASLIB}-config.cmake @ONLY)
-
-
- configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cblas.pc.in ${CMAKE_CURRENT_BINARY_DIR}/cblas.pc @ONLY)
+ configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cblas.pc.in ${CMAKE_CURRENT_BINARY_DIR}/${CBLASLIB}.pc @ONLY)
install(FILES
- ${CMAKE_CURRENT_BINARY_DIR}/cblas.pc
+ ${CMAKE_CURRENT_BINARY_DIR}/${CBLASLIB}.pc
DESTINATION ${PKG_CONFIG_DIR}
)
-
-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cmake/cblas-config-install.cmake.in
-- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/cblas-config.cmake @ONLY)
+- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/${CBLASLIB}-config.cmake @ONLY)
-install(FILES
-- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/cblas-config.cmake
-- ${LAPACK_BINARY_DIR}/cblas-config-version.cmake
-- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/cblas-${LAPACK_VERSION}
+- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/${CBLASLIB}-config.cmake
+- ${LAPACK_BINARY_DIR}/${CBLASLIB}-config-version.cmake
+- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${CBLASLIB}-${LAPACK_VERSION}
- )
-
--#install(EXPORT cblas-targets
--# DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/cblas-${LAPACK_VERSION}
+-#install(EXPORT ${CBLASLIB}-targets
+-# DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${CBLASLIB}-${LAPACK_VERSION}
-# COMPONENT Development
-# )
diff --git a/CBLAS/cmake/cblas-config-build.cmake.in b/CBLAS/cmake/cblas-config-build.cmake.in
@@ -76,14 +76,14 @@ deleted file mode 100644
-
-# Load lapack targets from the build tree, including lapacke targets.
-if(NOT TARGET lapacke)
-- include("@LAPACK_BINARY_DIR@/lapack-targets.cmake")
+- include("@LAPACK_BINARY_DIR@/@LAPACKLIB@-targets.cmake")
-endif()
-
-# Report cblas header search locations from build tree.
-set(CBLAS_INCLUDE_DIRS "@LAPACK_BINARY_DIR@/include")
-
-# Report cblas libraries.
--set(CBLAS_LIBRARIES cblas)
+-set(CBLAS_LIBRARIES @CBLASLIB@)
diff --git a/CBLAS/cmake/cblas-config-install.cmake.in b/CBLAS/cmake/cblas-config-install.cmake.in
deleted file mode 100644
--- a/CBLAS/cmake/cblas-config-install.cmake.in
@@ -96,19 +96,19 @@ deleted file mode 100644
-get_filename_component(_CBLAS_PREFIX "${_CBLAS_PREFIX}" PATH)
-
-# Load the LAPACK package with which we were built.
--set(LAPACK_DIR "${_CBLAS_PREFIX}/@CMAKE_INSTALL_LIBDIR@/cmake/lapack-@LAPACK_VERSION@")
+-set(LAPACK_DIR "${_CBLAS_PREFIX}/@CMAKE_INSTALL_LIBDIR@/cmake/@LAPACKLIB@-@LAPACK_VERSION@")
-find_package(LAPACK NO_MODULE)
-
-# Load lapacke targets from the install tree.
--if(NOT TARGET cblas)
-- include(${_CBLAS_SELF_DIR}/cblas-targets.cmake)
+-if(NOT TARGET @CBLASLIB@)
+- include(${_CBLAS_SELF_DIR}/@CBLASLIB@-targets.cmake)
-endif()
-
-# Report lapacke header search locations.
-set(CBLAS_INCLUDE_DIRS ${_CBLAS_PREFIX}/include)
-
-# Report lapacke libraries.
--set(CBLAS_LIBRARIES cblas)
+-set(CBLAS_LIBRARIES @CBLASLIB@)
-
-unset(_CBLAS_PREFIX)
-unset(_CBLAS_SELF_DIR)
@@ -128,16 +128,16 @@ deleted file mode 100644
diff --git a/CBLAS/src/CMakeLists.txt b/CBLAS/src/CMakeLists.txt
--- a/CBLAS/src/CMakeLists.txt
+++ b/CBLAS/src/CMakeLists.txt
-@@ -120,9 +120,5 @@
- VERSION ${LAPACK_VERSION}
- SOVERSION ${LAPACK_MAJOR_VERSION}
- )
--target_include_directories(cblas PUBLIC
+@@ -123,9 +123,5 @@
+ if(HAS_ATTRIBUTE_WEAK_SUPPORT)
+ target_compile_definitions(${CBLASLIB} PRIVATE HAS_ATTRIBUTE_WEAK_SUPPORT)
+ endif()
+-target_include_directories(${CBLASLIB} PUBLIC
- $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/../include>
- $<INSTALL_INTERFACE:include>
-)
- target_link_libraries(cblas PRIVATE ${BLAS_LIBRARIES})
- lapack_install_library(cblas)
+ target_link_libraries(${CBLASLIB} PRIVATE ${BLAS_LIBRARIES})
+ lapack_install_library(${CBLASLIB})
diff --git a/CMAKE/lapack-config-build.cmake.in b/CMAKE/lapack-config-build.cmake.in
deleted file mode 100644
--- a/CMAKE/lapack-config-build.cmake.in
@@ -146,7 +146,7 @@ deleted file mode 100644
-# Load lapack targets from the build tree if necessary.
-set(_LAPACK_TARGET "@_lapack_config_build_guard_target@")
-if(_LAPACK_TARGET AND NOT TARGET "${_LAPACK_TARGET}")
-- include("@LAPACK_BINARY_DIR@/lapack-targets.cmake")
+- include("@LAPACK_BINARY_DIR@/@LAPACKLIB@-targets.cmake")
-endif()
-unset(_LAPACK_TARGET)
-
@@ -168,7 +168,7 @@ deleted file mode 100644
-# Load lapack targets from the install tree if necessary.
-set(_LAPACK_TARGET "@_lapack_config_install_guard_target@")
-if(_LAPACK_TARGET AND NOT TARGET "${_LAPACK_TARGET}")
-- include("${_LAPACK_SELF_DIR}/lapack-targets.cmake")
+- include("${_LAPACK_SELF_DIR}/@LAPACKLIB@-targets.cmake")
-endif()
-unset(_LAPACK_TARGET)
-
@@ -184,11 +184,11 @@ deleted file mode 100644
diff --git a/CMakeLists.txt b/CMakeLists.txt
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
-@@ -112,11 +112,8 @@
+@@ -160,11 +160,8 @@
# --------------------------------------------------
--set(LAPACK_INSTALL_EXPORT_NAME lapack-targets)
+-set(LAPACK_INSTALL_EXPORT_NAME ${LAPACKLIB}-targets)
-
macro(lapack_install_library lib)
install(TARGETS ${lib}
@@ -196,7 +196,7 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
ARCHIVE DESTINATION ${CMAKE_INSTALL_LIBDIR} COMPONENT Development
LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR} COMPONENT RuntimeLibraries
RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR} COMPONENT RuntimeLibraries
-@@ -155,21 +152,6 @@
+@@ -204,21 +201,6 @@
include(CheckLAPACKCompilerFlags)
CheckLAPACKCompilerFlags()
@@ -204,7 +204,7 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
-# Check second function
-
-include(CheckTimeFunction)
--set(TIME_FUNC NONE ${TIME_FUNC})
+-set(NONE ${TIME_FUNC})
-CHECK_TIME_FUNCTION(NONE TIME_FUNC)
-CHECK_TIME_FUNCTION(INT_CPU_TIME TIME_FUNC)
-CHECK_TIME_FUNCTION(EXT_ETIME TIME_FUNC)
@@ -218,7 +218,7 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
# deprecated LAPACK and LAPACKE routines
option(BUILD_DEPRECATED "Build deprecated routines" OFF)
message(STATUS "Build deprecated routines: ${BUILD_DEPRECATED}")
-@@ -193,8 +175,9 @@
+@@ -242,8 +224,9 @@
endif()
# --------------------------------------------------
@@ -229,7 +229,7 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
# Check the usage of the user provided BLAS libraries
if(BLAS_LIBRARIES)
-@@ -205,113 +188,108 @@
+@@ -254,113 +237,108 @@
if(BLAS_FOUND)
message(STATUS "--> BLAS supplied by user is WORKING, will use ${BLAS_LIBRARIES}.")
else()
@@ -250,7 +250,7 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
- message(STATUS "Using supplied NETLIB BLAS implementation")
- add_subdirectory(BLAS)
+elseif(BUILD_BLAS)
- set(BLAS_LIBRARIES blas)
+ set(BLAS_LIBRARIES ${BLASLIB})
-else()
- set(CMAKE_EXE_LINKER_FLAGS
- "${CMAKE_EXE_LINKER_FLAGS} ${BLAS_LINKER_FLAGS}"
@@ -326,14 +326,14 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
+ find_package(LAPACK)
+
+elseif(BUILD_LAPACK)
- set(LAPACK_LIBRARIES lapack)
+ set(LAPACK_LIBRARIES ${LAPACKLIB})
+ set(LAPACK_FOUND TRUE)
+
+ set(NEED_BLAS TRUE)
+
+ # Check second function
+ include(CheckTimeFunction)
-+ set(TIME_FUNC NONE ${TIME_FUNC})
++ set(NONE ${TIME_FUNC})
+ CHECK_TIME_FUNCTION(NONE TIME_FUNC)
+ CHECK_TIME_FUNCTION(INT_CPU_TIME TIME_FUNC)
+ CHECK_TIME_FUNCTION(EXT_ETIME TIME_FUNC)
@@ -363,9 +363,9 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
+ add_subdirectory(TESTING)
+ endif()
+
-+ configure_file(${CMAKE_CURRENT_SOURCE_DIR}/lapack.pc.in ${CMAKE_CURRENT_BINARY_DIR}/lapack.pc @ONLY)
++ configure_file(${CMAKE_CURRENT_SOURCE_DIR}/lapack.pc.in ${CMAKE_CURRENT_BINARY_DIR}/${LAPACKLIB}.pc @ONLY)
+ install(FILES
-+ ${CMAKE_CURRENT_BINARY_DIR}/lapack.pc
++ ${CMAKE_CURRENT_BINARY_DIR}/${LAPACKLIB}.pc
+ DESTINATION ${PKG_CONFIG_DIR}
+ COMPONENT Development
+ )
@@ -393,8 +393,8 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
add_subdirectory(LAPACKE)
endif()
-@@ -338,109 +316,12 @@
- _display_cpp_implementation_msg("LAPACK")
+@@ -414,111 +392,16 @@
+ ExternalProject_Add_StepDependencies(lapackpp build blaspp ${BLAS_LIBRARIES} ${LAPACK_LIBRARIES})
endif()
-# --------------------------------------------------
@@ -430,23 +430,23 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
-# --------------------------------------------------
-
-if(NOT BLAS_FOUND)
-- set(ALL_TARGETS ${ALL_TARGETS} blas)
+- set(ALL_TARGETS ${ALL_TARGETS} ${BLASLIB})
-endif()
-
-if(NOT LATESTLAPACK_FOUND)
-- set(ALL_TARGETS ${ALL_TARGETS} lapack)
+- set(ALL_TARGETS ${ALL_TARGETS} ${LAPACKLIB})
-endif()
-
-if(BUILD_TESTING OR LAPACKE_WITH_TMG)
-- set(ALL_TARGETS ${ALL_TARGETS} tmglib)
+- set(ALL_TARGETS ${ALL_TARGETS} ${TMGLIB})
-endif()
-
-# Export lapack targets, not including lapacke, from the
-# install tree, if any.
-set(_lapack_config_install_guard_target "")
-if(ALL_TARGETS)
-- install(EXPORT lapack-targets
-- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/lapack-${LAPACK_VERSION}
+- install(EXPORT ${LAPACKLIB}-targets
+- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${LAPACKLIB}-${LAPACK_VERSION}
- COMPONENT Development
- )
-
@@ -457,12 +457,12 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
-
-# Include cblas in targets exported from the build tree.
-if(CBLAS)
-- set(ALL_TARGETS ${ALL_TARGETS} cblas)
+- set(ALL_TARGETS ${ALL_TARGETS} ${CBLASLIB})
-endif()
-
-# Include lapacke in targets exported from the build tree.
-if(LAPACKE)
-- set(ALL_TARGETS ${ALL_TARGETS} lapacke)
+- set(ALL_TARGETS ${ALL_TARGETS} ${LAPACKELIB})
+# Neither user specified or optimized BLAS libraries can be used
+if(NEED_BLAS AND NOT BLAS_FOUND)
+ message(FATAL_ERROR "--> No BLAS library found. Specify BLAS_LIBRARIES or enable USE_OPTIMIZED_BLAS or BUILD_BLAS.")
@@ -471,7 +471,7 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
-# Export lapack and lapacke targets from the build tree, if any.
-set(_lapack_config_build_guard_target "")
-if(ALL_TARGETS)
-- export(TARGETS ${ALL_TARGETS} FILE lapack-targets.cmake)
+- export(TARGETS ${ALL_TARGETS} FILE ${LAPACKLIB}-targets.cmake)
-
- # Choose one of the lapack or lapacke targets to use as a guard
- # for lapack-config.cmake to load targets from the build tree.
@@ -480,36 +480,37 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
+if(NEED_LAPACK AND NOT LAPACK_FOUND)
+ message(FATAL_ERROR "--> No LAPACK library found. Specify LAPACK_LIBRARIES or enable USE_OPTIMIZED_LAPACK or BUILD_LAPACK.")
endif()
--
+
-configure_file(${LAPACK_SOURCE_DIR}/CMAKE/lapack-config-build.cmake.in
-- ${LAPACK_BINARY_DIR}/lapack-config.cmake @ONLY)
+- ${LAPACK_BINARY_DIR}/${LAPACKLIB}-config.cmake @ONLY)
-
-
--configure_file(${CMAKE_CURRENT_SOURCE_DIR}/lapack.pc.in ${CMAKE_CURRENT_BINARY_DIR}/lapack.pc @ONLY)
+-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/lapack.pc.in ${CMAKE_CURRENT_BINARY_DIR}/${LAPACKLIB}.pc @ONLY)
- install(FILES
-- ${CMAKE_CURRENT_BINARY_DIR}/lapack.pc
+- ${CMAKE_CURRENT_BINARY_DIR}/${LAPACKLIB}.pc
- DESTINATION ${PKG_CONFIG_DIR}
- COMPONENT Development
- )
-
-configure_file(${LAPACK_SOURCE_DIR}/CMAKE/lapack-config-install.cmake.in
-- ${LAPACK_BINARY_DIR}/CMakeFiles/lapack-config.cmake @ONLY)
+- ${LAPACK_BINARY_DIR}/CMakeFiles/${LAPACKLIB}-config.cmake @ONLY)
-
-include(CMakePackageConfigHelpers)
-write_basic_package_version_file(
-- ${LAPACK_BINARY_DIR}/lapack-config-version.cmake
+- ${LAPACK_BINARY_DIR}/${LAPACKLIB}-config-version.cmake
- VERSION ${LAPACK_VERSION}
- COMPATIBILITY SameMajorVersion
- )
-
-install(FILES
-- ${LAPACK_BINARY_DIR}/CMakeFiles/lapack-config.cmake
-- ${LAPACK_BINARY_DIR}/lapack-config-version.cmake
-- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/lapack-${LAPACK_VERSION}
+- ${LAPACK_BINARY_DIR}/CMakeFiles/${LAPACKLIB}-config.cmake
+- ${LAPACK_BINARY_DIR}/${LAPACKLIB}-config-version.cmake
+- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${LAPACKLIB}-${LAPACK_VERSION}
- COMPONENT Development
- )
--
-\ No newline at end of file
+ if (LAPACK++)
+ install(
+ DIRECTORY "${LAPACK_BINARY_DIR}/lib/"
diff --git a/LAPACKE/CMakeLists.txt b/LAPACKE/CMakeLists.txt
--- a/LAPACKE/CMakeLists.txt
+++ b/LAPACKE/CMakeLists.txt
@@ -517,7 +518,7 @@ diff --git a/LAPACKE/CMakeLists.txt b/LAPACKE/CMakeLists.txt
message(STATUS "LAPACKE enable")
enable_language(C)
--set(LAPACK_INSTALL_EXPORT_NAME lapacke-targets)
+-set(LAPACK_INSTALL_EXPORT_NAME ${LAPACKELIB}-targets)
-
# Create a header file lapacke_mangling.h for the routines called in my C programs
include(FortranCInterface)
@@ -526,38 +527,38 @@ diff --git a/LAPACKE/CMakeLists.txt b/LAPACKE/CMakeLists.txt
VERSION ${LAPACK_VERSION}
SOVERSION ${LAPACK_MAJOR_VERSION}
)
--target_include_directories(lapacke PUBLIC
+-target_include_directories(${LAPACKELIB} PUBLIC
- $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/include>
- $<INSTALL_INTERFACE:include>
-)
-if(WIN32 AND NOT UNIX)
-- target_compile_definitions(lapacke PUBLIC HAVE_LAPACK_CONFIG_H LAPACK_COMPLEX_STRUCTURE)
+- target_compile_definitions(${LAPACKELIB} PUBLIC HAVE_LAPACK_CONFIG_H LAPACK_COMPLEX_STRUCTURE)
- message(STATUS "Windows BUILD")
-endif()
if(LAPACKE_WITH_TMG)
- target_link_libraries(lapacke PRIVATE tmglib)
+ target_link_libraries(${LAPACKELIB} PRIVATE ${TMGLIB})
@@ -111,22 +101,3 @@
DESTINATION ${PKG_CONFIG_DIR}
COMPONENT Development
)
-
-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cmake/lapacke-config-version.cmake.in
-- ${LAPACK_BINARY_DIR}/lapacke-config-version.cmake @ONLY)
+- ${LAPACK_BINARY_DIR}/${LAPACKELIB}-config-version.cmake @ONLY)
-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cmake/lapacke-config-build.cmake.in
-- ${LAPACK_BINARY_DIR}/lapacke-config.cmake @ONLY)
+- ${LAPACK_BINARY_DIR}/${LAPACKELIB}-config.cmake @ONLY)
-
-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cmake/lapacke-config-install.cmake.in
-- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/lapacke-config.cmake @ONLY)
+- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/${LAPACKELIB}-config.cmake @ONLY)
-install(FILES
-- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/lapacke-config.cmake
-- ${LAPACK_BINARY_DIR}/lapacke-config-version.cmake
-- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/lapacke-${LAPACK_VERSION}
+- ${CMAKE_CURRENT_BINARY_DIR}/CMakeFiles/${LAPACKELIB}-config.cmake
+- ${LAPACK_BINARY_DIR}/${LAPACKELIB}-config-version.cmake
+- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${LAPACKELIB}-${LAPACK_VERSION}
- COMPONENT Development
- )
-
--install(EXPORT lapacke-targets
-- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/lapacke-${LAPACK_VERSION}
+-install(EXPORT ${LAPACKELIB}-targets
+- DESTINATION ${CMAKE_INSTALL_LIBDIR}/cmake/${LAPACKELIB}-${LAPACK_VERSION}
- COMPONENT Development
- )
diff --git a/LAPACKE/cmake/lapacke-config-build.cmake.in b/LAPACKE/cmake/lapacke-config-build.cmake.in
@@ -570,8 +571,8 @@ deleted file mode 100644
-find_package(LAPACK NO_MODULE)
-
-# Load lapack targets from the build tree, including lapacke targets.
--if(NOT TARGET lapacke)
-- include("@LAPACK_BINARY_DIR@/lapack-targets.cmake")
+-if(NOT TARGET @LAPACKELIB@)
+- include("@LAPACK_BINARY_DIR@/@LAPACKLIB@-targets.cmake")
-endif()
-
-# Hint for project building against lapack
@@ -581,7 +582,7 @@ deleted file mode 100644
-set(LAPACKE_INCLUDE_DIRS "@LAPACK_BINARY_DIR@/include")
-
-# Report lapacke libraries.
--set(LAPACKE_LIBRARIES lapacke ${LAPACK_LIBRARIES})
+-set(LAPACKE_LIBRARIES @LAPACKELIB@ ${LAPACK_LIBRARIES})
diff --git a/LAPACKE/cmake/lapacke-config-install.cmake.in b/LAPACKE/cmake/lapacke-config-install.cmake.in
deleted file mode 100644
--- a/LAPACKE/cmake/lapacke-config-install.cmake.in
@@ -594,12 +595,12 @@ deleted file mode 100644
-get_filename_component(_LAPACKE_PREFIX "${_LAPACKE_PREFIX}" PATH)
-
-# Load the LAPACK package with which we were built.
--set(LAPACK_DIR "${_LAPACKE_PREFIX}/@CMAKE_INSTALL_LIBDIR@/cmake/lapack-@LAPACK_VERSION@")
+-set(LAPACK_DIR "${_LAPACKE_PREFIX}/@CMAKE_INSTALL_LIBDIR@/cmake/@LAPACK@-@LAPACK_VERSION@")
-find_package(LAPACK NO_MODULE)
-
-# Load lapacke targets from the install tree.
--if(NOT TARGET lapacke)
-- include(${_LAPACKE_SELF_DIR}/lapacke-targets.cmake)
+-if(NOT TARGET @LAPACKELIB@)
+- include(${_LAPACKE_SELF_DIR}/@LAPACKELIB@-targets.cmake)
-endif()
-
-# Hint for project building against lapack
@@ -609,7 +610,7 @@ deleted file mode 100644
-set(LAPACKE_INCLUDE_DIRS ${_LAPACKE_PREFIX}/include)
-
-# Report lapacke libraries.
--set(LAPACKE_LIBRARIES lapacke ${LAPACK_LIBRARIES})
+-set(LAPACKE_LIBRARIES @LAPACKELIB@ ${LAPACK_LIBRARIES})
-
-unset(_LAPACKE_PREFIX)
-unset(_LAPACKE_SELF_DIR)
diff --git a/academic/latex2html/latex2html.SlackBuild b/academic/latex2html/latex2html.SlackBuild
index 5509805331..11ba0f8d59 100644
--- a/academic/latex2html/latex2html.SlackBuild
+++ b/academic/latex2html/latex2html.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for latex2html
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=latex2html
VERSION=${VERSION:-2020}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -103,4 +113,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ldl/ldl.SlackBuild b/academic/ldl/ldl.SlackBuild
index c0b4d98c5e..75e05912fe 100644
--- a/academic/ldl/ldl.SlackBuild
+++ b/academic/ldl/ldl.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for LDL
@@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ldl
SRCNAM=SuiteSparse
SUBDIR=LDL
@@ -29,6 +31,7 @@ VERSION=${VERSION:-2.2.6}
SRCVER=${SRCVER:-5.8.1}
BUILD=${BUILD:-7}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -108,4 +118,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/libghemical/libghemical.SlackBuild b/academic/libghemical/libghemical.SlackBuild
index 83caa1c70b..2e17949822 100644
--- a/academic/libghemical/libghemical.SlackBuild
+++ b/academic/libghemical/libghemical.SlackBuild
@@ -1,13 +1,16 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for libghemical
# Written by Daniil Bratashov (dn2010@gmail.com)
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=libghemical
VERSION=${VERSION:-3.0.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -17,7 +20,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -82,4 +92,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/libqalculate/README b/academic/libqalculate/README
deleted file mode 100644
index aa40e23964..0000000000
--- a/academic/libqalculate/README
+++ /dev/null
@@ -1,4 +0,0 @@
-Qalculate! is a multi-purpose desktop calculator for GNU/Linux (and Mac
-OS). It is small and simple to use but with much power and versatility
-underneath. Features include customizable functions, units, arbitrary
-precision, plotting, and a user-friendly interface (GTK+ and CLI).
diff --git a/academic/libqalculate/libqalculate.SlackBuild b/academic/libqalculate/libqalculate.SlackBuild
deleted file mode 100644
index 9d906e36f5..0000000000
--- a/academic/libqalculate/libqalculate.SlackBuild
+++ /dev/null
@@ -1,102 +0,0 @@
-#!/bin/sh
-
-# Slackware build script for libqalculate
-
-# Copyright 2016-2020 Larry Hajali <larryhaja[at]gmail[dot]com>
-# All rights reserved.
-#
-# Redistribution and use of this script, with or without modification, is
-# permitted provided that the following conditions are met:
-#
-# 1. Redistributions of this script must retain the above copyright
-# notice, this list of conditions and the following disclaimer.
-#
-# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
-# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
-# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
-# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
-# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
-# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
-# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
-# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
-# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
-# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-
-PRGNAM=libqalculate
-VERSION=${VERSION:-3.10.0}
-BUILD=${BUILD:-1}
-TAG=${TAG:-_SBo}
-
-if [ -z "$ARCH" ]; then
- case "$( uname -m )" in
- i?86) ARCH=i586 ;;
- arm*) ARCH=arm ;;
- *) ARCH=$( uname -m ) ;;
- esac
-fi
-
-CWD=$(pwd)
-TMP=${TMP:-/tmp/SBo}
-PKG=$TMP/package-$PRGNAM
-OUTPUT=${OUTPUT:-/tmp}
-
-if [ "$ARCH" = "i586" ]; then
- SLKCFLAGS="-O2 -march=i586 -mtune=i686"
- LIBDIRSUFFIX=""
-elif [ "$ARCH" = "i686" ]; then
- SLKCFLAGS="-O2 -march=i686 -mtune=i686"
- LIBDIRSUFFIX=""
-elif [ "$ARCH" = "x86_64" ]; then
- SLKCFLAGS="-O2 -fPIC"
- LIBDIRSUFFIX="64"
-else
- SLKCFLAGS="-O2"
- LIBDIRSUFFIX=""
-fi
-
-set -e
-
-rm -rf $PKG
-mkdir -p $TMP $PKG $OUTPUT
-cd $TMP
-rm -rf $PRGNAM-$VERSION
-tar xvf $CWD/$PRGNAM-$VERSION.tar.gz
-cd $PRGNAM-$VERSION
-chown -R root:root .
-find -L . \
- \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
- -o -perm 511 \) -exec chmod 755 {} \; -o \
- \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
- -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
-
-CFLAGS="$SLKCFLAGS" \
-CXXFLAGS="$SLKCFLAGS" \
-./configure \
- --prefix=/usr \
- --libdir=/usr/lib${LIBDIRSUFFIX} \
- --docdir=/usr/doc/$PRGNAM-$VERSION \
- --mandir=/usr/man \
- --disable-silent-rules \
- --enable-static=no \
- --disable-rpath \
- --enable-defs2doc \
- --with-libcurl \
- --with-icu \
- --build=$ARCH-slackware-linux
-
-make
-make install DESTDIR=$PKG
-
-find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
- | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
-
-find $PKG/usr/man -type f -exec gzip -9 {} \;
-
-cp -a AUTHORS ChangeLog COPYING NEWS README* TODO $PKG/usr/doc/$PRGNAM-$VERSION
-cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
-
-mkdir -p $PKG/install
-cat $CWD/slack-desc > $PKG/install/slack-desc
-
-cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
diff --git a/academic/libqalculate/libqalculate.info b/academic/libqalculate/libqalculate.info
deleted file mode 100644
index a2ac9c6801..0000000000
--- a/academic/libqalculate/libqalculate.info
+++ /dev/null
@@ -1,10 +0,0 @@
-PRGNAM="libqalculate"
-VERSION="3.10.0"
-HOMEPAGE="https://qalculate.github.io/"
-DOWNLOAD="https://github.com/Qalculate/libqalculate/releases/download/v3.10.0/libqalculate-3.10.0.tar.gz"
-MD5SUM="2f68e3dfeb36de2c88fc7078cb86ab4c"
-DOWNLOAD_x86_64=""
-MD5SUM_x86_64=""
-REQUIRES=""
-MAINTAINER="Larry Hajali"
-EMAIL="larryhaja[at]gmail[dot]com"
diff --git a/academic/libqalculate/slack-desc b/academic/libqalculate/slack-desc
deleted file mode 100644
index 84c06b2451..0000000000
--- a/academic/libqalculate/slack-desc
+++ /dev/null
@@ -1,19 +0,0 @@
-# HOW TO EDIT THIS FILE:
-# The "handy ruler" below makes it easier to edit a package description.
-# Line up the first '|' above the ':' following the base package name, and
-# the '|' on the right side marks the last column you can put a character in.
-# You must make exactly 11 lines for the formatting to be correct. It's also
-# customary to leave one space after the ':' except on otherwise blank lines.
-
- |-----handy-ruler------------------------------------------------------|
-libqalculate: libqalculate (desktop caculator library)
-libqalculate:
-libqalculate: Qalculate! is a multi-purpose desktop calculator for GNU/Linux (and
-libqalculate: Mac OS). It is small and simple to use but with much power and
-libqalculate: versatility underneath. Features include customizable functions,
-libqalculate: units, arbitrary precision, plotting, and a user-friendly interface
-libqalculate: (GTK+ and CLI).
-libqalculate:
-libqalculate: Homepage: http://qalculate.github.io/
-libqalculate:
-libqalculate:
diff --git a/academic/link-grammar/link-grammar.SlackBuild b/academic/link-grammar/link-grammar.SlackBuild
index ad94858ddd..f36e347907 100644
--- a/academic/link-grammar/link-grammar.SlackBuild
+++ b/academic/link-grammar/link-grammar.SlackBuild
@@ -1,14 +1,17 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for link-grammar
# Written by Michael Gabilondo <mgabilo{at}gmail{dot}com>
# This work is in the public domain
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=link-grammar
VERSION=${VERSION:-4.8.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -18,7 +21,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -82,4 +92,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/locarna/locarna.SlackBuild b/academic/locarna/locarna.SlackBuild
index fdeaea36f9..650dcafa56 100644
--- a/academic/locarna/locarna.SlackBuild
+++ b/academic/locarna/locarna.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for locarna
@@ -23,10 +23,13 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=locarna
VERSION=${VERSION:-1.9.2.3}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -104,4 +114,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/loggerpro/README b/academic/loggerpro/README
deleted file mode 100644
index 8eba8d50b0..0000000000
--- a/academic/loggerpro/README
+++ /dev/null
@@ -1,12 +0,0 @@
-Vernier LoggerPro (data-collection and analysis software)
-
-Vernier Software & Technology is the leader in educational data
-collection technology. Since 1981, we have developed affordable,
-award-winning interfaces, sensors, software, and standards-based
-curriculum. This package installs files to allow either LoggerPro
-or LoggerLite to access devices.
-
-Sadly, this package installs two symlinks into /usr/local/share/
-and one symlink into /usr/local/bin/ - the /usr/local/ directory
-is hardcoded into the LoggerPro files somewhere, and I've not
-been able to figure out where or how to correct it...
diff --git a/academic/loggerpro/doinst.sh b/academic/loggerpro/doinst.sh
deleted file mode 100644
index 0fb9c8b686..0000000000
--- a/academic/loggerpro/doinst.sh
+++ /dev/null
@@ -1,14 +0,0 @@
-if [ -x /usr/bin/update-desktop-database ]; then
- /usr/bin/update-desktop-database -q usr/share/applications >/dev/null 2>&1
-fi
-
-if [ -x /usr/bin/update-mime-database ]; then
- /usr/bin/update-mime-database usr/share/mime >/dev/null 2>&1
-fi
-
-if [ -e usr/share/icons/hicolor/icon-theme.cache ]; then
- if [ -x /usr/bin/gtk-update-icon-cache ]; then
- /usr/bin/gtk-update-icon-cache -f usr/share/icons/hicolor >/dev/null 2>&1
- fi
-fi
-
diff --git a/academic/loggerpro/loggerpro.SlackBuild b/academic/loggerpro/loggerpro.SlackBuild
deleted file mode 100644
index bef9968019..0000000000
--- a/academic/loggerpro/loggerpro.SlackBuild
+++ /dev/null
@@ -1,156 +0,0 @@
-#!/bin/sh
-
-# Slackware build script for loggerpro
-
-# Copyright 2016 Robby Workman, Tuscaloosa, Alabama, USA
-# All rights reserved.
-#
-# Redistribution and use of this script, with or without modification, is
-# permitted provided that the following conditions are met:
-#
-# 1. Redistributions of this script must retain the above copyright
-# notice, this list of conditions and the following disclaimer.
-#
-# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
-# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
-# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
-# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
-# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
-# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
-# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
-# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
-# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
-# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-
-PRGNAM=loggerpro
-VERSION=${VERSION:-3.8.4.6}
-BUILD=${BUILD:-1}
-TAG=${TAG:-_SBo}
-
-if [ -z "$ARCH" ]; then
- case "$( uname -m )" in
- i?86) ARCH=i586 ;;
- arm*) ARCH=arm ;;
- *) ARCH=$( uname -m ) ;;
- esac
-fi
-
-CWD=$(pwd)
-TMP=${TMP:-/tmp/SBo}
-PKG=$TMP/package-$PRGNAM
-OUTPUT=${OUTPUT:-/tmp}
-
-if [ "$ARCH" = "i586" ]; then
- SHORTARCH="32"
- LIBDIRSUFFIX=""
-elif [ "$ARCH" = "i686" ]; then
- SHORTARCH="32"
- LIBDIRSUFFIX=""
-elif [ "$ARCH" = "x86_64" ]; then
- SHORTARCH="64"
- LIBDIRSUFFIX="64"
-else
- SHORTARCH="32"
- LIBDIRSUFFIX=""
-fi
-
-set -e
-
-rm -rf $PKG
-mkdir -p $TMP $PKG $OUTPUT
-cd $TMP
-rm -rf $PRGNAM-$VERSION
-tar xvf $CWD/LPL-$(printf $VERSION | tr -d .)-$SHORTARCH.tar.gz
-ar -x vstdrivers_*.deb
-tar xf data.tar.xz -C $PKG
-ar -x vstloggerpro_${VERSION}_*.deb
-tar xf data.tar.xz -C $PKG
-
-chown -R root:root $PKG
-find -L $PKG \
- \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
- -o -perm 511 \) -exec chmod 755 {} \; -o \
- \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
- -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
-
-# /etc/udev goes to /lib/udev
-mv $PKG/etc $PKG/lib
-
-mv $PKG/usr/local/bin/* $PKG/usr/bin
-
-# Copy over icons first since their presence won't allow a clean move
-cp -a $PKG/usr/local/share/icons $PKG/usr/share
-rm -rf $PKG/usr/local/share/icons
-
-# Now move everything else
-mv $PKG/usr/local/share/* $PKG/usr/share
-
-# Move the docs over
-mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
-mv $PKG/usr/share/doc/* $PKG/usr/doc/$PRGNAM-$VERSION
-cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
-rmdir $PKG/usr/share/doc
-
-# Kill the /usr/local tree and remove empty /usr/sbin dir
-rm -rf $PKG/usr/local
-rmdir $PKG/usr/sbin
-
-# Fix libdir
-[ "$LIBDIRSUFFIX" = "64" ] && mv $PKG/usr/lib $PKG/usr/lib${LIBDIRSUFFIX}
-
-# Create library symlinks
-ln -s libGoIO.so.2.0.53 $PKG/usr/lib${LIBDIRSUFFIX}/libGoIO.so.2
-ln -s libGoIO.so.2 $PKG/usr/lib${LIBDIRSUFFIX}/libGoIO.so
-ln -s libNGIO.so.1.0.0 $PKG/usr/lib${LIBDIRSUFFIX}/libNGIO.so.1
-ln -s libNGIO.so.1 $PKG/usr/lib${LIBDIRSUFFIX}/libNGIO.so
-
-# Nope, we're not writing to /usr during runtime
-mkdir -p \
- $PKG/var/lib/LoggerPro/VSTSupport \
- $PKG/var/lib/LoggerPro/tmp \
- $PKG/var/lib/LoggerLite/tmp
-rm -r \
- $PKG/usr/share/LoggerPro/Linux/VSTSupport \
- $PKG/usr/share/LoggerPro/Linux/tmp \
- $PKG/usr/share/LoggerLite/Linux/tmp
-ln -s /var/lib/LoggerPro/VSTSupport $PKG/usr/share/LoggerPro/Linux/VSTSupport
-ln -s /var/lib/LoggerPro/tmp $PKG/usr/share/LoggerPro/Linux/tmp
-ln -s /var/lib/LoggerLite/tmp $PKG/usr/share/LoggerLite/Linux/tmp
-chmod 1777 \
- $PKG/var/lib/LoggerPro/VSTSupport \
- $PKG/var/lib/LoggerPro/tmp \
- $PKG/var/lib/LoggerLite/tmp
-
-# The below points were mentioned to Vernier in their forum:
-# http://www.vernier.com/forums/logger-pro-linux/404-packaging-improvements/
-#
-# /usr/share/LoggerPro/Experiments/ will remain 0755; only the sysadmin
-# should be writing to this. TODO: Contact Vernier about this.
-# Thinking to myself here... Would be nice to have a three-tier system maybe,
-# e.g. /usr/share/LoggerPro/Experiments/, then check a sysadmin configured
-# location (e.g. /data/common/LoggerPro/Experiments/ is something like I
-# would have), then $HOME, e.g. $HOME/LoggerPro/Experiments/, with all
-# three (if set) being check and the contents merged, and each level
-# overrides (e.g. same-named files) the previous levels.
-# While I'm writing, for the love of sanity, PLEASE use /tmp or /var/tmp
-# or some other place, or at least make it configurable in a systemwide
-# config file at e.g. /etc/Vernier/LoggerPro.conf (this would be a good
-# place to make the other stuff above configurable too)
-# Note the move of udev files to /lib/udev instead of /etc/udev
-
-# Work around the hardcoding of /usr/local (I can't figure out where it's
-# hardcoded or thus how to fix it)
-mkdir -p $PKG/usr/local/bin $PKG/usr/local/share
-ln -s /usr/bin/loggerpro $PKG/usr/local/bin
-ln -s /usr/share/LoggerPro $PKG/usr/local/share
-ln -s /usr/share/LoggerLite $PKG/usr/local/share
-
-find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
- | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
-
-mkdir -p $PKG/install
-cat $CWD/slack-desc > $PKG/install/slack-desc
-cat $CWD/doinst.sh > $PKG/install/doinst.sh
-
-cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
diff --git a/academic/loggerpro/loggerpro.info b/academic/loggerpro/loggerpro.info
deleted file mode 100644
index 66f1151f05..0000000000
--- a/academic/loggerpro/loggerpro.info
+++ /dev/null
@@ -1,10 +0,0 @@
-PRGNAM="loggerpro"
-VERSION="3.8.4.6"
-HOMEPAGE="https://www.vernier.com/forums/logger-pro-linux/"
-DOWNLOAD="http://www.vernier.com/files/downloads/LPL-3846-32.tar.gz"
-MD5SUM="5b088d162258656dd2b83163fd968352"
-DOWNLOAD_x86_64="http://www.vernier.com/files/downloads/LPL-3846-64.tar.gz"
-MD5SUM_x86_64="3c58a64a2e669a532b119da995c92cb7"
-REQUIRES=""
-MAINTAINER="Robby Workman"
-EMAIL="rworkman@slackbuilds.org"
diff --git a/academic/loggerpro/slack-desc b/academic/loggerpro/slack-desc
deleted file mode 100644
index 085a65e8ef..0000000000
--- a/academic/loggerpro/slack-desc
+++ /dev/null
@@ -1,19 +0,0 @@
-# HOW TO EDIT THIS FILE:
-# The "handy ruler" below makes it easier to edit a package description.
-# Line up the first '|' above the ':' following the base package name, and
-# the '|' on the right side marks the last column you can put a character in.
-# You must make exactly 11 lines for the formatting to be correct. It's also
-# customary to leave one space after the ':' except on otherwise blank lines.
-
- |-----handy-ruler------------------------------------------------------|
-loggerpro: loggerpro (data-collection and analysis software)
-loggerpro:
-loggerpro: Vernier Software & Technology is the leader in educational data
-loggerpro: collection technology. Since 1981, we have developed affordable,
-loggerpro: award-winning interfaces, sensors, software, and standards-based
-loggerpro: curriculum. This package installs files to allow either LoggerPro
-loggerpro: or LoggerLite to access devices.
-loggerpro:
-loggerpro:
-loggerpro:
-loggerpro:
diff --git a/academic/lpsolve/lpsolve.SlackBuild b/academic/lpsolve/lpsolve.SlackBuild
index a4cfd84c19..844d7a5aca 100644
--- a/academic/lpsolve/lpsolve.SlackBuild
+++ b/academic/lpsolve/lpsolve.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for lp_solve
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=lpsolve
VERSION=${VERSION:-5.5.2.5}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -102,4 +112,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/mafft/mafft.SlackBuild b/academic/mafft/mafft.SlackBuild
index 844be72f25..4757e84b57 100644
--- a/academic/mafft/mafft.SlackBuild
+++ b/academic/mafft/mafft.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for mafft
-# Copyright 2013-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=mafft
-VERSION=${VERSION:-7.471}
+VERSION=${VERSION:-7.475}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -136,4 +146,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/mafft/mafft.info b/academic/mafft/mafft.info
index dcc03b7049..5663f559f8 100644
--- a/academic/mafft/mafft.info
+++ b/academic/mafft/mafft.info
@@ -1,8 +1,8 @@
PRGNAM="mafft"
-VERSION="7.471"
+VERSION="7.475"
HOMEPAGE="https://mafft.cbrc.jp/alignment/software/"
-DOWNLOAD="https://mafft.cbrc.jp/alignment/software/mafft-7.471-with-extensions-src.tgz"
-MD5SUM="6ac312a0261d99221dc0be437caba132"
+DOWNLOAD="https://mafft.cbrc.jp/alignment/software/mafft-7.475-with-extensions-src.tgz"
+MD5SUM="7edeb0ff62260bba8bdf682e0bb604e4"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/magic/magic.SlackBuild b/academic/magic/magic.SlackBuild
index 31127e136a..73f7640cfc 100644
--- a/academic/magic/magic.SlackBuild
+++ b/academic/magic/magic.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for magic
# Written by Mauricio Martinez <eigenfilter {at} gmail [dot] com>
@@ -14,10 +14,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=magic
VERSION=${VERSION:-8.0.211}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -27,7 +30,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -89,4 +99,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/mathics/README b/academic/mathics/README
index 89bae8e2a1..9cac17e266 100644
--- a/academic/mathics/README
+++ b/academic/mathics/README
@@ -2,8 +2,3 @@ Mathics is a free, light-weight alternative to Mathematica. Mathics is
a general-purpose online computer algebra system featuring Mathematica-
compatible syntax and functions. It is backed by highly extensible
Python code, relying on SymPy for most mathematical tasks.
-
-
-Optional Dependency
-
-You can install Cython for some extra functionality/optimizations.
diff --git a/academic/mathics/mathics.SlackBuild b/academic/mathics/mathics.SlackBuild
index fe30f109d5..6979a0b9ab 100644
--- a/academic/mathics/mathics.SlackBuild
+++ b/academic/mathics/mathics.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for Mathics
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=mathics
VERSION=${VERSION:-1.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -69,7 +79,7 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
-python setup.py install --root=$PKG
+python2 setup.py install --root=$PKG
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
@@ -84,4 +94,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/mathics/mathics.info b/academic/mathics/mathics.info
index f61f3000c2..450a2998cf 100644
--- a/academic/mathics/mathics.info
+++ b/academic/mathics/mathics.info
@@ -5,6 +5,6 @@ DOWNLOAD="https://github.com/mathics/Mathics/archive/v1.0/Mathics-1.0.tar.gz"
MD5SUM="a0a161a1787093b90b21e73b0d44c0fc"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="colorama mpmath ply python-dateutil python-django-legacy six sympy"
+REQUIRES="colorama mpmath python-dateutil python2-django-legacy sympy"
MAINTAINER="David Melik"
EMAIL="dchmelik@gmail.com"
diff --git a/academic/mathomatic/mathomatic.SlackBuild b/academic/mathomatic/mathomatic.SlackBuild
index 55b8d42f69..498aab76d1 100644
--- a/academic/mathomatic/mathomatic.SlackBuild
+++ b/academic/mathomatic/mathomatic.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for mathomatic
@@ -24,10 +24,13 @@
#
# Originally written by Dylan Armitage <d.armitage89@gmail.com>
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=mathomatic
VERSION=${VERSION:-16.0.5}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -111,4 +121,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/matio/matio.SlackBuild b/academic/matio/matio.SlackBuild
index 899061e0b6..359465d8b9 100644
--- a/academic/matio/matio.SlackBuild
+++ b/academic/matio/matio.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for matio
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=matio
VERSION=${VERSION:-1.5.9}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -99,4 +109,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/maxima/maxima.SlackBuild b/academic/maxima/maxima.SlackBuild
index de32fcbf35..6163ace6fa 100644
--- a/academic/maxima/maxima.SlackBuild
+++ b/academic/maxima/maxima.SlackBuild
@@ -1,7 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for maxima
+# Copyright 2021 Judah Milgram <milgram@cgpp.com>
# Copyright 2017 Dhaby Xiloj <slack.dhabyx@gmail.com>
# All rights reserved.
# Based on work of Robby and others slackers.
@@ -30,11 +31,15 @@
# Modified by Ken Milmore 2009
# Modified by Glenn Becker to update to version 5.28.0
# Glenn Becker -> update to version 5.38.1
+# JM -> update version 5.39 -> 5.44
+
+cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=maxima
-VERSION=${VERSION:-5.39.0}
+VERSION=${VERSION:-5.44.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -44,7 +49,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -110,4 +122,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/maxima/maxima.info b/academic/maxima/maxima.info
index 676c4f7b56..8235c0ba3c 100644
--- a/academic/maxima/maxima.info
+++ b/academic/maxima/maxima.info
@@ -1,10 +1,10 @@
PRGNAM="maxima"
-VERSION="5.39.0"
+VERSION="5.44.0"
HOMEPAGE="http://maxima.sourceforge.net/"
-DOWNLOAD="https://sourceforge.net/projects/maxima/files/Maxima-source/5.39.0-source/maxima-5.39.0.tar.gz"
-MD5SUM="3bccafb512ff1054be700c61601088af"
+DOWNLOAD="https://sourceforge.net/projects/maxima/files/Maxima-source/5.44.0-source/maxima-5.44.0.tar.gz"
+MD5SUM="75e040745161901968d9c99c7a258e5c"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
-MAINTAINER="DhabyX"
-EMAIL="slack.dhabyx@gmail.com"
+MAINTAINER="Judah Milgram"
+EMAIL="milgram@cgpp.com"
diff --git a/academic/meep/meep.SlackBuild b/academic/meep/meep.SlackBuild
index 114680d8ec..09b3411e22 100644
--- a/academic/meep/meep.SlackBuild
+++ b/academic/meep/meep.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for meep
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=meep
VERSION=${VERSION:-1.17.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -124,4 +134,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/megax/megax.SlackBuild b/academic/megax/megax.SlackBuild
index e7ae3b4e24..165c9f4de6 100644
--- a/academic/megax/megax.SlackBuild
+++ b/academic/megax/megax.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for megax (formerly 'megacc')
# This takes the place of "megacc" in 2018, as it includes also the GUI
@@ -24,10 +24,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=megax
-VERSION=${VERSION:-10.1.8_1}
+VERSION=${VERSION:-10.2.5_1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
DEBVER=$(echo $VERSION | tr _ -)
@@ -39,7 +42,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -108,4 +118,4 @@ cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/megax/megax.info b/academic/megax/megax.info
index cf1d99f562..17a8b6a7ce 100644
--- a/academic/megax/megax.info
+++ b/academic/megax/megax.info
@@ -1,10 +1,10 @@
PRGNAM="megax"
-VERSION="10.1.8_1"
+VERSION="10.2.5_1"
HOMEPAGE="http://www.megasoftware.net/"
-DOWNLOAD="https://www.megasoftware.net/releases/megax_10.1.8-1_i386.deb"
-MD5SUM="132278353e321cf8d6097aefb45dc582"
-DOWNLOAD_x86_64="https://www.megasoftware.net/releases/megax_10.1.8-1_amd64.deb"
-MD5SUM_x86_64="7083d62e933fd482aac50c98a13dd723"
+DOWNLOAD="https://www.megasoftware.net/releases/megax_10.2.5-1_i386.deb"
+MD5SUM="cda0edb08a1688e4b82d0f0f61722741"
+DOWNLOAD_x86_64="https://www.megasoftware.net/releases/megax_10.2.5-1_amd64.deb"
+MD5SUM_x86_64="98fbfb10289e24efaea7d525e3316726"
REQUIRES=""
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/meme-db-gomo/meme-db-gomo.SlackBuild b/academic/meme-db-gomo/meme-db-gomo.SlackBuild
index ab81c7466f..fecb2a0b4b 100644
--- a/academic/meme-db-gomo/meme-db-gomo.SlackBuild
+++ b/academic/meme-db-gomo/meme-db-gomo.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for meme-db-gomo
-# Copyright 2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2020-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,16 +22,26 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=meme-db-gomo
VERSION=${VERSION:-3.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=gomo_databases
ARCH=noarch
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -62,4 +72,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/meme-db-gomo/meme-db-gomo.info b/academic/meme-db-gomo/meme-db-gomo.info
index b70eb8f874..d4acb6c1c5 100644
--- a/academic/meme-db-gomo/meme-db-gomo.info
+++ b/academic/meme-db-gomo/meme-db-gomo.info
@@ -1,7 +1,7 @@
PRGNAM="meme-db-gomo"
VERSION="3.2"
-HOMEPAGE="http://meme-suite.org/db/gomo"
-DOWNLOAD="http://meme-suite.org/meme-software/Databases/gomo/gomo_databases.3.2.tgz"
+HOMEPAGE="https://meme-suite.org/db/gomo"
+DOWNLOAD="https://meme-suite.org/meme-software/Databases/gomo/gomo_databases.3.2.tgz"
MD5SUM="5b8fcf3c541b30e2a66580f289132e97"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
diff --git a/academic/meme-db-motif/meme-db-motif.SlackBuild b/academic/meme-db-motif/meme-db-motif.SlackBuild
index f0e266d8c8..5221e6c98c 100644
--- a/academic/meme-db-motif/meme-db-motif.SlackBuild
+++ b/academic/meme-db-motif/meme-db-motif.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for meme-db-motif
-# Copyright 2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2020-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,16 +22,26 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=meme-db-motif
-VERSION=${VERSION:-12.19}
+VERSION=${VERSION:-12.21}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=motif_databases
ARCH=noarch
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -62,4 +72,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/meme-db-motif/meme-db-motif.info b/academic/meme-db-motif/meme-db-motif.info
index 549263ca24..4dc3827ebd 100644
--- a/academic/meme-db-motif/meme-db-motif.info
+++ b/academic/meme-db-motif/meme-db-motif.info
@@ -1,8 +1,8 @@
PRGNAM="meme-db-motif"
-VERSION="12.19"
-HOMEPAGE="http://meme-suite.org/db/motifs"
-DOWNLOAD="http://meme-suite.org/meme-software/Databases/motifs/motif_databases.12.19.tgz"
-MD5SUM="f5ffcaecc07570ee19dba20b82d7bd73"
+VERSION="12.21"
+HOMEPAGE="https://meme-suite.org/db/motifs"
+DOWNLOAD="https://meme-suite.org/meme/meme-software/Databases/motifs/motif_databases.12.21.tgz"
+MD5SUM="c37d53c3146f2e8cf6218c0251108d44"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES=""
diff --git a/academic/meme-db-tgene/meme-db-tgene.SlackBuild b/academic/meme-db-tgene/meme-db-tgene.SlackBuild
index 95e75e5a5c..4a29171aca 100644
--- a/academic/meme-db-tgene/meme-db-tgene.SlackBuild
+++ b/academic/meme-db-tgene/meme-db-tgene.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for meme-db-tgene
-# Copyright 2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2020-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,16 +22,26 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=meme-db-tgene
VERSION=${VERSION:-1.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=tgene_databases
ARCH=noarch
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -62,4 +72,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/meme-db-tgene/meme-db-tgene.info b/academic/meme-db-tgene/meme-db-tgene.info
index 6c90f7f5d3..246a5d99c9 100644
--- a/academic/meme-db-tgene/meme-db-tgene.info
+++ b/academic/meme-db-tgene/meme-db-tgene.info
@@ -1,7 +1,7 @@
PRGNAM="meme-db-tgene"
VERSION="1.0"
-HOMEPAGE="http://meme-suite.org/db/tgene"
-DOWNLOAD="http://meme-suite.org/meme-software/Databases/tgene/tgene_databases.1.0.tgz"
+HOMEPAGE="https://meme-suite.org/db/tgene"
+DOWNLOAD="https://meme-suite.org/meme-software/Databases/tgene/tgene_databases.1.0.tgz"
MD5SUM="8a2e467f979a4721e4fb2233bf2b0a04"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
diff --git a/academic/meme-suite/meme-suite.SlackBuild b/academic/meme-suite/meme-suite.SlackBuild
index 558c35ebd6..ecf755c3c9 100644
--- a/academic/meme-suite/meme-suite.SlackBuild
+++ b/academic/meme-suite/meme-suite.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for meme-suite
-# Copyright 2017-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2017-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=meme-suite
-VERSION=${VERSION:-5.1.1}
+VERSION=${VERSION:-5.3.3}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=meme
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -119,4 +129,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/meme-suite/meme-suite.info b/academic/meme-suite/meme-suite.info
index 8c94b67b1f..a459321ac4 100644
--- a/academic/meme-suite/meme-suite.info
+++ b/academic/meme-suite/meme-suite.info
@@ -1,8 +1,8 @@
PRGNAM="meme-suite"
-VERSION="5.1.1"
-HOMEPAGE="http://meme-suite.org/"
-DOWNLOAD="http://meme-suite.org/meme-software/5.1.1/meme-5.1.1.tar.gz"
-MD5SUM="98ffab29abb95621b947b2b2fa6e5ee7"
+VERSION="5.3.3"
+HOMEPAGE="https://meme-suite.org/"
+DOWNLOAD="https://meme-suite.org/meme-software/5.3.3/meme-5.3.3.tar.gz"
+MD5SUM="97b258e6a6627ada02404a2224b13e92"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="openmpi perl-HTML-Template perl-JSON python3 meme-db-gomo meme-db-motif meme-db-tgene"
diff --git a/academic/mendeleydesktop/README b/academic/mendeleydesktop/README
index 8e9077e627..cdf14f5692 100644
--- a/academic/mendeleydesktop/README
+++ b/academic/mendeleydesktop/README
@@ -4,11 +4,3 @@ management tool for desktop and web.
Before you use Mendeley, make sure that you agree with the terms and
conditions at http://www.mendeley.com/terms/
-
-Optional Dependency
-
-qt5 -- this is highly recommended (replacing Mendeley's bundled qt5) to
-be able to access all the functions if you use KDE5. You need to use
-the option 'SYSTEM_QT5=yes', for example:
-
- SYSTEM_QT5=yes ./mendeleydesktop.SlackBuild
diff --git a/academic/mendeleydesktop/mendeleydesktop.SlackBuild b/academic/mendeleydesktop/mendeleydesktop.SlackBuild
index 6be7008a01..e9b7410cc2 100644
--- a/academic/mendeleydesktop/mendeleydesktop.SlackBuild
+++ b/academic/mendeleydesktop/mendeleydesktop.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for mendeleydesktop
@@ -25,10 +25,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=mendeleydesktop
VERSION=${VERSION:-1.17.9}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -38,7 +41,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -71,7 +81,7 @@ find -L . \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
# removing QT5 bundled libraries
-if [ "${SYSTEM_QT5:-no}" != "no" ]; then
+if [ "${SYSTEM_QT5:-yes}" != "no" ]; then
rm -rf lib/qt
rm bin/qt.conf
rm -rf lib/$PRGNAM/plugins
@@ -119,4 +129,4 @@ cat $CWD/doinst.sh > $PKG/install/doinst.sh
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/metis/metis.SlackBuild b/academic/metis/metis.SlackBuild
index 5bd73be964..665e144a8e 100644
--- a/academic/metis/metis.SlackBuild
+++ b/academic/metis/metis.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for METIS
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=metis
VERSION=${VERSION:-5.1.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$(uname -m)" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}
@@ -103,4 +113,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/mkDSSP/makefile.patch b/academic/mkDSSP/makefile.patch
deleted file mode 100644
index 17563fde9a..0000000000
--- a/academic/mkDSSP/makefile.patch
+++ /dev/null
@@ -1,76 +0,0 @@
-Description: assorted fixes
- [Maarten L. Hekkelman <m.hekkelman@cmbi.ru.nl>]
- * DEST_DIR patched to DESTDIR
- .
- [Laszlo Kajan <lkajan@rostlab.org>]
- * stripping is patched out so that it can be done by dh into a debug package
- * line echo suppression is removed
- * spelling errors in man page fixed
- .
- Upstream is aware of this patch.
-Author: Maarten L. Hekkelman <m.hekkelman@cmbi.ru.nl>
-Author: Laszlo Kajan <lkajan@rostlab.org>
---- a/makefile
-+++ b/makefile
-@@ -11,18 +11,16 @@
-
- all: mkdssp
-
--include make.config
--
- VERSION = 2.2.1
-
- DEST_DIR ?= /usr/local
- LIB_DIR = $(BOOST_LIB_DIR)
- INC_DIR = $(BOOST_INC_DIR)
--BIN_DIR = $(DEST_DIR)/bin
--MAN_DIR = $(DEST_DIR)/man/man1
-+BIN_DIR = $(DESTDIR)$(DEST_DIR)/bin
-+MAN_DIR = $(DESTDIR)$(DEST_DIR)/share/man/man1
-
--BOOST_LIBS = thread filesystem program_options iostreams system
--LIBS = $(BOOST_LIBS:%=boost_%$(BOOST_LIB_SUFFIX)) z bz2
-+BOOST_LIBS = thread program_options iostreams system
-+LIBS = $(BOOST_LIBS:%=boost_%$(BOOST_LIB_SUFFIX))
-
- DEFINES = USE_COMPRESSION LINUX VERSION='"$(VERSION)"'
- CXX = g++
-@@ -49,22 +47,19 @@
- OBJECTS = $(OBJ_DIR)/mkdssp.o $(OBJ_DIR)/dssp.o $(OBJ_DIR)/primitives-3d.o $(OBJ_DIR)/structure.o $(OBJ_DIR)/utils.o $(OBJ_DIR)/mas.o $(OBJ_DIR)/iocif.o
-
- mkdssp: $(OBJECTS)
-- @ echo linking $@
-- @ $(CXX) -static -o $@ $^ $(LDOPTS)
-+ $(CXX) -o $@ $^ $(LDOPTS)
-
--include $(OBJECTS:%.o=%.d)
-+-include $(OBJECTS:%.o=%.d)
-
- $(OBJECTS:.o=.d):
-
- $(OBJ_DIR):
-- @ mkdir -p $(OBJ_DIR)
-+ mkdir -p $(OBJ_DIR)
-
- $(OBJ_DIR)/%.o: %.cpp | $(OBJ_DIR)
-- @ echo compiling $@
-- @ $(CXX) -MD -c -o $@ $< $(CFLAGS)
-+ $(CXX) -MD -c -o $@ $< $(CPPFLAGS) $(CFLAGS)
-
- clean:
-- install -d $(BIN_DIR) $(MAN_DIR)
- rm -rf $(OBJ_DIR)/* mkdssp
-
- install: mkdssp
-@@ -85,11 +80,3 @@
- @ cp doc/mkdssp.1 $(DIST_NAME)/doc/mkdssp.1
- tar czf $(DIST_NAME).tgz $(DIST_NAME)
- cp $(DIST_NAME).tgz dssp_$(VERSION).orig.tar.gz
--
--make.config:
-- @echo "creating empty make.config file"
-- @echo "# Set local options for make here" > make.config
-- @echo "#BOOST_LIB_SUFFIX = -mt" >> make.config
-- @echo "#BOOST_LIB_DIR = $(HOME)/projects/boost/lib" >> make.config
-- @echo "#BOOST_INC_DIR = $(HOME)/projects/boost/include" >> make.config
--
diff --git a/academic/mkDSSP/mkDSSP.SlackBuild b/academic/mkDSSP/mkDSSP.SlackBuild
index 4a0e714a2c..66793c86d7 100644
--- a/academic/mkDSSP/mkDSSP.SlackBuild
+++ b/academic/mkDSSP/mkDSSP.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for mkDSSP
-# Copyright 2013-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,27 +22,39 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=mkDSSP
-SRCNAM=dssp
-VERSION=${VERSION:-2.2.1}
+VERSION=${VERSION:-4.0_git6338c83}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
+
+SRCNAM=dssp
+COMMIT="6338c836b631e87fc03bd147ec67d27ea72f6f70"
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
@@ -60,9 +72,9 @@ set -e
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
-rm -rf $SRCNAM-$VERSION
-tar xvf $CWD/$SRCNAM-$VERSION.tgz
-cd $SRCNAM-$VERSION
+rm -rf $SRCNAM-$COMMIT
+tar xvf $CWD/$SRCNAM-$COMMIT.tar.gz
+cd $SRCNAM-$COMMIT
chown -R root:root .
find -L . \
\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
@@ -70,19 +82,20 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
-# Thanks to Debian for the patches!
-patch -p1 -i $CWD/makefile.patch
-patch -p1 -i $CWD/thread_include.patch
-
CFLAGS="$SLKCFLAGS" \
CXXFLAGS="$SLKCFLAGS" \
-BIN_DIR=/usr/bin \
-MAN_DIR=/usr/man/man1 \
-make
+./configure \
+ --prefix=/usr \
+ --libdir=/usr/lib${LIBDIRSUFFIX} \
+ --sysconfdir=/etc \
+ --localstatedir=/var \
+ --disable-revision \
+ --mandir=/usr/man \
+ --docdir=/usr/doc/$PRGNAM-$VERSION \
+ --build=$ARCH-slackware-linux
-make install DEST_DIR=$PKG \
-BIN_DIR=$PKG/usr/bin \
-MAN_DIR=$PKG/usr/man/man1
+make
+make install DESTDIR=$PKG mandir=$PKG/usr/man
# Some programs (like aline) expect the binary to be called just "dssp"
cd $PKG/usr/bin
@@ -92,12 +105,9 @@ cd -
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
-find $PKG/usr/man -type f -exec gzip -9 {} \;
-for i in $( find $PKG/usr/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done
-
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
cp -a \
- changelog LICENSE_1_0.txt README.txt \
+ LICENSE README.md \
$PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
cat $CWD/References > $PKG/usr/doc/$PRGNAM-$VERSION/References
@@ -106,4 +116,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/mkDSSP/mkDSSP.info b/academic/mkDSSP/mkDSSP.info
index 3f2ccdf323..43a6d3a224 100644
--- a/academic/mkDSSP/mkDSSP.info
+++ b/academic/mkDSSP/mkDSSP.info
@@ -1,10 +1,10 @@
PRGNAM="mkDSSP"
-VERSION="2.2.1"
-HOMEPAGE="http://swift.cmbi.ru.nl/gv/dssp/"
-DOWNLOAD="ftp://ftp.cmbi.ru.nl/pub/software/dssp/dssp-2.2.1.tgz"
-MD5SUM="0faa63ea1f0c69def077530de0cf84c1"
+VERSION="4.0_git6338c83"
+HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/DSSP_3.html"
+DOWNLOAD="https://github.com/PDB-REDO/dssp/archive/6338c83/dssp-6338c836b631e87fc03bd147ec67d27ea72f6f70.tar.gz"
+MD5SUM="c4616197bb510c36f1c4dcce018e870d"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES=""
+REQUIRES="libcifpp"
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/mkDSSP/thread_include.patch b/academic/mkDSSP/thread_include.patch
deleted file mode 100644
index f0b462b19c..0000000000
--- a/academic/mkDSSP/thread_include.patch
+++ /dev/null
@@ -1,23 +0,0 @@
-Description: moving boost thread include out of header that does not use it
- Patch is not yet forwarded upstream.
-Author: Laszlo Kajan <lkajan@rostlab.org>
---- a/src/utils.h
-+++ b/src/utils.h
-@@ -10,7 +10,6 @@
- #endif
-
- #include <time.h>
--#include <boost/thread.hpp>
- #include <boost/lexical_cast.hpp>
- #include <boost/format.hpp>
- #include <boost/filesystem.hpp>
---- a/src/structure.cpp
-+++ b/src/structure.cpp
-@@ -18,6 +18,7 @@
- #define foreach BOOST_FOREACH
- #include <boost/algorithm/string.hpp>
- #include <boost/math/special_functions/round.hpp>
-+#include <boost/thread.hpp>
-
- #include "align-2d.h"
- #include "utils.h"
diff --git a/academic/mpb/mpb.SlackBuild b/academic/mpb/mpb.SlackBuild
index 2191964934..a1f22544ce 100644
--- a/academic/mpb/mpb.SlackBuild
+++ b/academic/mpb/mpb.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for mpb
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=mpb
VERSION=${VERSION:-1.11.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -147,4 +157,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/mrbayes/mrbayes.SlackBuild b/academic/mrbayes/mrbayes.SlackBuild
index 2bf1289cb4..cd1d2a252a 100644
--- a/academic/mrbayes/mrbayes.SlackBuild
+++ b/academic/mrbayes/mrbayes.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for mrbayes
-# Copyright 2013-2019 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,11 +22,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=mrbayes
SRCNAM=MrBayes
VERSION=${VERSION:-3.2.7a}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -108,4 +118,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/muscle/muscle.SlackBuild b/academic/muscle/muscle.SlackBuild
index 2258892211..a0e6ea735b 100644
--- a/academic/muscle/muscle.SlackBuild
+++ b/academic/muscle/muscle.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for muscle
-# Copyright 2011-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=muscle
VERSION=${VERSION:-3.8.1551}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
MANUAL=muscle_userguide3.8.pdf
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -102,4 +112,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ncbi-blast+/ncbi-blast+.SlackBuild b/academic/ncbi-blast+/ncbi-blast+.SlackBuild
index ded8e93c20..5958727d3f 100644
--- a/academic/ncbi-blast+/ncbi-blast+.SlackBuild
+++ b/academic/ncbi-blast+/ncbi-blast+.SlackBuild
@@ -1,10 +1,10 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ncbi-blast+
# This takes the place of ncbi-blast-plus (2013-2019), which just
# repackaged the binaries provided by upstream.
-# Copyright 2013-2020 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -24,10 +24,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ncbi-blast+
-VERSION=${VERSION:-2.10.1}
+VERSION=${VERSION:-2.11.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
DIRNAM=ncbi-blast
@@ -39,7 +42,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -118,4 +128,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ncbi-blast+/ncbi-blast+.info b/academic/ncbi-blast+/ncbi-blast+.info
index e41785d7da..b688877e0b 100644
--- a/academic/ncbi-blast+/ncbi-blast+.info
+++ b/academic/ncbi-blast+/ncbi-blast+.info
@@ -1,10 +1,10 @@
PRGNAM="ncbi-blast+"
-VERSION="2.10.1"
+VERSION="2.11.0"
HOMEPAGE="https://blast.ncbi.nlm.nih.gov/"
-DOWNLOAD="ftp://ftp.ncbi.nih.gov/blast/executables/blast+/2.10.1/ncbi-blast-2.10.1+-src.tar.gz"
-MD5SUM="216cddf560eedc2b8d88bdd1ada1dfd1"
+DOWNLOAD="ftp://ftp.ncbi.nih.gov/blast/executables/blast+/2.11.0/ncbi-blast-2.11.0+-src.tar.gz"
+MD5SUM="13f93eea6741af2bbcc07f59941dc77b"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
-REQUIRES="lmdb python3"
+REQUIRES=""
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"
diff --git a/academic/ncbi-blast/ncbi-blast.SlackBuild b/academic/ncbi-blast/ncbi-blast.SlackBuild
index 72015cf2b0..5004bcd266 100644
--- a/academic/ncbi-blast/ncbi-blast.SlackBuild
+++ b/academic/ncbi-blast/ncbi-blast.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ncbi-blast
-# Copyright 2013-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ncbi-blast
VERSION=${VERSION:-2.2.26}
BUILD=${BUILD:-2}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=blast
@@ -37,7 +40,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -107,4 +117,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ncbi-rmblastn/ncbi-rmblastn.SlackBuild b/academic/ncbi-rmblastn/ncbi-rmblastn.SlackBuild
index b78a2be545..7e196c6153 100644
--- a/academic/ncbi-rmblastn/ncbi-rmblastn.SlackBuild
+++ b/academic/ncbi-rmblastn/ncbi-rmblastn.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ncbi-rmblastn
-# Copyright 2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2018-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,10 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ncbi-rmblastn
VERSION=${VERSION:-2.2.28}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -35,7 +38,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -77,4 +87,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/nco/nco.SlackBuild b/academic/nco/nco.SlackBuild
index 74bd346139..f7f96fb556 100644
--- a/academic/nco/nco.SlackBuild
+++ b/academic/nco/nco.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for nco
@@ -23,10 +23,13 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=nco
VERSION=${VERSION:-4.9.7}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -36,7 +39,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -105,4 +115,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ncview/ncview.SlackBuild b/academic/ncview/ncview.SlackBuild
index daa3914316..6cbd65f5a7 100644
--- a/academic/ncview/ncview.SlackBuild
+++ b/academic/ncview/ncview.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for: ncview
# Copyright (c) 2018 Ekin Akoglu <ekinakoglu@gmail.com>
@@ -21,10 +21,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ncview
VERSION=${VERSION:-2.1.8}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -34,7 +37,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -94,4 +104,4 @@ mkdir $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
diff --git a/academic/ngspice/ngspice.SlackBuild b/academic/ngspice/ngspice.SlackBuild
index b30fd4d99e..471f9d9241 100644
--- a/academic/ngspice/ngspice.SlackBuild
+++ b/academic/ngspice/ngspice.SlackBuild
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ngspice and libngspice
# Written by B. Jogai <jogaib {at} comcast [dot] net>
@@ -6,10 +6,13 @@
# Set initial variables:
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ngspice
VERSION=${VERSION:-34}
-BUILD=${BUILD:-4}
+BUILD=${BUILD:-5}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -19,7 +22,14 @@ if [ -z "$ARCH" ]; then
esac
fi
-CWD=$(pwd)
+# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
+# the name of the created package would be, and then exit. This information
+# could be useful to other scripts.
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -93,6 +103,8 @@ CFLAGS="$SLKCFLAGS" \
make
make DESTDIR=$PKG install
+# This has installed the configure output file as /usr/include/config.h.
+
cd ..
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
@@ -112,12 +124,18 @@ cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
cat $CWD/$PRGNAM-$VERSION-manual.pdf \
> $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM-$VERSION-manual.pdf
+# The shared library enabled by "--with-ngshared"
install -Dm755 ./release/src/.libs/libngspice.so.0.0.0 \
"$PKG/usr/lib${LIBDIRSUFFIX}/libngspice.so.0.0.0"
ln -s "libngspice.so.0.0.0" "$PKG/usr/lib${LIBDIRSUFFIX}/libngspice.so.0"
ln -s "libngs