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* academic/bibletime: Use cmake-202x. B. Watson23 hours2-66/+6
* academic/nco: Updated for version 4.9.4. ArTourter24 hours2-4/+4
* academic/lalnview: Update script. Petar Petrov31 hours3-13/+22
* academic/ugene: Updated for version 35.0. Petar Petrov4 days3-6/+7
* academic/trimmomatic: Updated for version 0.39. Petar Petrov4 days2-4/+4
* academic/trfind: Updated for version 4.09.1. Petar Petrov4 days2-23/+56
* academic/treerecs: Updated for version 1.2. Petar Petrov4 days3-21/+19
* academic/spades: Updated for version 3.14.1. Petar Petrov5 days2-4/+4
* academic/seqkit: Updated for version 0.13.2. Petar Petrov5 days2-6/+6
* academic/seaview: Updated for version 5.0.4. Petar Petrov5 days2-4/+4
* academic/pamlX: Update substitution. Petar Petrov5 days1-2/+2
* academic/paml: Updated for version 4.9j. Petar Petrov5 days2-8/+9
* academic/ncbi-blast+: Updated for version 2.10.1. Petar Petrov5 days2-5/+5
* academic/meme-suite: Updated for version 5.1.1. Petar Petrov5 days2-4/+4
* academic/megax: Updated for version 10.1.8_1. Petar Petrov5 days2-6/+6
* academic/mafft: Updated for version 7.471. Petar Petrov5 days2-4/+4
* academic/jalview: Updated for version 2.11.1.0. Petar Petrov5 days3-42/+9
* academic/io_lib: Updated for version 1.14.13. Petar Petrov5 days2-4/+4
* academic/genometools: Updated for version 1.6.1. Petar Petrov5 days2-10/+7
* academic/fiji: Updated for version 20200902_2101. Petar Petrov5 days2-16/+10
* academic/diamond: Updated for version 0.9.36. Petar Petrov5 days2-7/+7
* academic/bedtools: Updated for version 2.29.2. Petar Petrov5 days2-11/+7
* academic/amplifx: Change URLs. Petar Petrov5 days2-4/+4
* academic/RepeatMasker: Updated for version 4.1.1. Petar Petrov5 days2-4/+4
* academic/PhyMLR: Updated for version 3.3.20200621. Petar Petrov5 days2-8/+10
* academic/HMMER: Updated for version 3.3.1. Petar Petrov5 days2-5/+5
* academic/wehi-weasel: Updated for version 3.7.1.18. Petar Petrov5 days3-7/+7
* academic/xiphos: Fix man location. Tim Dickson8 days1-8/+3
* academic/gwyddion: Updated for version 2.56. Daniil Bratashov8 days4-15/+6
* academic/bibletime: Updated for version 3.0. Tim Dickson2020-09-053-16/+76
* academic/cvc4: Updated for version 1.8. Nick Smallbone2020-09-053-13/+28
* academic/eprover: Updated for version 2.5. Nick Smallbone2020-09-052-6/+6
* academic/ViennaRNA: Updated for version 2.4.15. Rob van Nues2020-09-042-4/+4
* academic/pysam: Updated for version 0.16.0.1. Rob van Nues2020-09-042-11/+11
* academic/STAR: Updated for version 2.7.5c. Rob van Nues2020-09-042-4/+4
* academic/rpy2: Updated for version 3.3.5. Rob van Nues2020-09-042-4/+4
* academic/OpenFOAM: Updated for version 8. lorenzotrevisan2020-08-293-8/+8
* academic/dakota: Updated for version 6.11.0. lorenzotrevisan2020-08-293-6/+8
* academic/bibletime: Update README. Tim Dickson2020-06-281-5/+7
* academic/biblesync: Update README. Tim Dickson2020-06-281-3/+3
* academic/sword-data-kjv: Update README. Tim Dickson2020-06-281-5/+6
* academic/sword: Update README. Tim Dickson2020-06-281-10/+13
* academic/xiphos: Update README. Tim Dickson2020-06-281-8/+8
* academic/reduce-algebra: Updated for version 20200624svn5377. Alexander Verbovetsky2020-06-283-8/+8
* academic/rpy2: Updated for version 3.3.4. Rob van Nues2020-06-283-9/+9
* academic/fet: Updated for version 5.44.9. R.S.Ananda Murthy2020-06-282-4/+4
* academic/scilab: Fix md5sum. Edward W. Koenig2020-06-282-2/+2
* academic/scilab: Updated for version 6.1.0 Edward W. Koenig2020-06-203-12/+16
* academic/sundials: Updated for version 5.3.0. R. S. Ananda Murthy2020-06-202-4/+4
* academic/copasi: Updated for version 4.28.226. Pedro Mendes2020-06-203-23/+25