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* academic/suitesparse: Updated for version 5.1.0 Christoph Willing2017-12-092-4/+4
* academic/cadabra2: Updated for version 2.1.7. Alexander Verbovetsky2017-12-022-4/+4
* academic/scidavis: Patched to fix crashes. Fellype do Nascimento2017-12-023-1/+57
* academic/gaw3: Updated for version 20170716. R. S. Ananda Murthy2017-12-022-4/+4
* academic/ngspice: Updated for version 27. R. S. Ananda Murthy2017-11-235-26/+36
* academic/pyCRAC: Updated for version 1.2.4.0. rob van nues2017-11-205-92/+11
* academic/fet: Updated for version 5.34.0. R.S.Ananda Murthy2017-11-202-4/+4
* academic/cadabra2: Switch to https. Willy Sudiarto Raharjo2017-11-202-3/+3
* academic/reduce-algebra: Updated for version 20171112svn4264. Alexander Verbovetsky2017-11-182-7/+7
* academic/veusz: Updated for version 2.1.1. Fellype do Nascimento2017-11-183-6/+6
* academic/copasi: Updated for version 4.22.170. Pedro Mendes2017-11-173-7/+7
* academic/cadabra2: Added (field-theory motivated computer algebra). Alexander Verbovetsky2017-11-045-0/+175
* academic/paml: Update DOWNLOAD url. Andrew Clemons2017-11-041-2/+2
* academic/itex2mml: Remove obsolete patch. Andrew Clemons2017-11-042-24/+0
* academic/pyCRAC: Added (Next generation sequencing analysis). rob van nues2017-11-038-0/+432
* academic/veusz: Updated for version 2.1. Fellype do Nascimento2017-11-013-7/+6
* academic/scidavis: Updated for version 1.22. Fellype do Nascimento2017-10-282-4/+5
* academic/fet: Updated for version 5.33.3. R.S.Ananda Murthy2017-10-282-5/+5
* academic/exonerate: Switch to https. Willy Sudiarto Raharjo2017-10-262-2/+2
* academic/xiphos: Updated for version 4.0.7. Tim Dickson2017-10-213-8/+37
* academic/qalculate-gtk: Updated for version 2.1.0 Larry Hajali2017-10-142-4/+4
* academic/libqalculate: Updated for version 2.1.0 Larry Hajali2017-10-142-4/+4
* academic/PhyTime: Removed (Included in PhyML). Willy Sudiarto Raharjo2017-10-116-1743/+0
* academic/meme-suite: Added (Motif based sequence analysis tools). Petar Petrov2017-10-115-0/+265
* academic/hyphy: Added (Hypothesis Testing using Phylogenies). Petar Petrov2017-10-115-0/+216
* academic/pal2nal: Added (Create a codon-based DNA alignment). Petar Petrov2017-10-115-0/+119
* academic/zotero: Updated for version 5.0.21. Petar Petrov2017-10-112-12/+8
* academic/wehi-weasel: Updated for version 3.4.2.17. Petar Petrov2017-10-112-6/+6
* academic/vcftools: Updated for version 0.1.15. Petar Petrov2017-10-112-9/+7
* academic/ugene: Updated for version 1.27.0. Petar Petrov2017-10-113-6/+6
* academic/spades: Updated for version 3.11.1. Petar Petrov2017-10-112-4/+4
* academic/snpEff: Updated for version 4.3r. Petar Petrov2017-10-112-5/+5
* academic/prank-msa: Updated for version 170427. Petar Petrov2017-10-113-7/+7
* academic/megacc: Updated for version 7.0.26_1. Petar Petrov2017-10-112-5/+5
* academic/finchtv: Updated for version 1.3.1. Petar Petrov2017-10-113-11/+13
* academic/exonerate: Updated for version 2.4.0. Petar Petrov2017-10-112-4/+4
* academic/cutadapt: Updated for version 1.14. Petar Petrov2017-10-112-4/+4
* academic/cistrome-mdseqpos: Updated for v. git_20170829_6334683. Petar Petrov2017-10-113-15/+15
* academic/cistrome-extra: Updated for version git_20170829_6334683. Petar Petrov2017-10-112-12/+12
* academic/bwa: Updated for version 0.7.16a. Petar Petrov2017-10-113-6/+6
* academic/bppsuite: Updated for version 2.3.1. Petar Petrov2017-10-112-8/+7
* academic/bpp-popgen: Updated for version 2.3.1. Petar Petrov2017-10-112-9/+7
* academic/bpp-phyl-omics: Updated for version 2.3.1. Petar Petrov2017-10-113-10/+8
* academic/bpp-seq-omics: Updated for version 2.3.1. Petar Petrov2017-10-112-9/+7
* academic/bpp-phyl: Updated for version 2.3.1. Petar Petrov2017-10-112-9/+7
* academic/bpp-seq: Updated for version 2.3.1. Petar Petrov2017-10-112-9/+7
* academic/bpp-core: Updated for version 2.3.1. Petar Petrov2017-10-112-9/+7
* academic/archaeopteryx: Updated for version 0.9920b. Petar Petrov2017-10-113-6/+6
* academic/PhyML: Updated for version 3.3.20170530. Petar Petrov2017-10-114-26/+34
* academic/dakota: Install the doinst.sh file. Matteo Bernardini2017-10-111-0/+1