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* academic/pari: Updated for version 2.11.1. Joachim Kruth2019-01-053-9/+7
* academic/samtools: Updated for version 1.9 + new maintainer. Rob van Nues2019-01-055-97/+69
* academic/bcftools: Added (BCF calling tools). Rob van Nues2019-01-054-0/+146
* academic/bowtie2: Updated for version 2.3.4.3 + new maintainer. Rob van Nues2019-01-054-25/+27
* academic/ngspice: Updated for version 29. R. S. Ananda Murthy2019-01-052-6/+6
* academic/cryptominisat: Fix MD5SUM. Willy Sudiarto Raharjo2018-12-261-1/+1
* academic/kraken: Added (Assigning Taxonomic Labels). Petar Petrov2018-12-255-0/+156
* academic/jellyfish_k-mer: Added (k-mers counting tools). Petar Petrov2018-12-254-0/+144
* academic/ugene: Updated for version 1.31.1. Petar Petrov2018-12-244-11/+15
* academic/trimmomatic: Added (Trimming Tool). Petar Petrov2018-12-245-0/+138
* academic/ncbi-rmblastn: Update DEP. Petar Petrov2018-12-241-1/+1
* academic/ncbi-blast-plus: Removed (Use ncbi-blast+). Willy Sudiarto Raharjo2018-12-245-178/+0
* academic/ImageJ: Removed (Use fiji). Willy Sudiarto Raharjo2018-12-248-632/+0
* academic/ij-plugins-UCSD: Removed (Use fiji). Willy Sudiarto Raharjo2018-12-244-97/+0
* academic/ij-plugins-LOCI: Removed (Use fiji). Willy Sudiarto Raharjo2018-12-244-100/+0
* academic/fiji: Added (ImageJ Distribution). Petar Petrov2018-12-248-0/+234
* academic/wehi-weasel: Updated for version 3.5.0.17. Petar Petrov2018-12-242-6/+6
* academic/vcftools: Updated for version 0.1.16. Petar Petrov2018-12-242-6/+6
* academic/hyphy: Updated for version 2.3.14. Petar Petrov2018-12-243-13/+20
* academic/stringtie: Added (Assembler of RNA-Seq alignments). Petar Petrov2018-12-244-0/+131
* academic/tabix-legacy: Added (Generic indexer). Petar Petrov2018-12-244-0/+148
* academic/spades: Updated for version 3.13.0. Petar Petrov2018-12-242-5/+5
* academic/samtools-legacy: Added (Sequence Alignment/Map Tools). Petar Petrov2018-12-245-0/+205
* academic/ncbi-blast+: Added (BLAST+ Command Line Applications). Petar Petrov2018-12-245-0/+189
* academic/ncbi-blast: Update script. Petar Petrov2018-12-243-19/+19
* academic/megax: Updated for version 10.0.5_1. Petar Petrov2018-12-242-8/+8
* academic/mafft: Updated for version 7.407. Petar Petrov2018-12-242-4/+8
* academic/diamond: Added (A sequence aligner). Petar Petrov2018-12-245-0/+161
* academic/clark-ugene: Added (supervised sequence classification). Petar Petrov2018-12-244-0/+171
* academic/bppsuite: Updated for version 2.4.1. Petar Petrov2018-12-242-5/+5
* academic/bpp-seq-omics: Updated for version 2.4.1. Petar Petrov2018-12-242-4/+4
* academic/bpp-seq: Updated for version 2.4.1. Petar Petrov2018-12-242-4/+4
* academic/bpp-popgen: Updated for version 2.4.1. Petar Petrov2018-12-242-4/+4
* academic/bpp-phyl-omics: Updated for version 2.4.1. Petar Petrov2018-12-242-4/+4
* academic/bpp-phyl: Updated for version 2.4.1. Petar Petrov2018-12-242-4/+4
* academic/bpp-core: Updated for version 2.4.1. Petar Petrov2018-12-242-4/+4
* academic/bowtie2-legacy: Added (aligning sequencing reads). Petar Petrov2018-12-245-0/+160
* academic/archaeopteryx: Updated for version 0.9928b. Petar Petrov2018-12-244-8/+12
* academic/aliview: Updated for version 1.25. Petar Petrov2018-12-242-4/+4
* academic/RepeatMasker: Updated for version 4.0.8. Petar Petrov2018-12-242-6/+6
* academic/FCSalyzer: Updated for version 0.9.16_alpha. Petar Petrov2018-12-242-6/+6
* academic/WEVOTE: Added (WEighted VOting Taxonomic idEntification). Petar Petrov2018-12-245-0/+165
* academic/boinc: Updated for version 7.14.2. Edward W. Koenig2018-12-222-5/+5
* academic/cryptominisat: Updated for version 5.6.6. Alan Aversa2018-12-222-4/+4
* academic/fastqc: Updated for version 0.11.8 + new maintainer. Rob van Nues2018-12-223-10/+18
* academic/pulseview: Updated for version 0.4.1. Andrzej Telszewski2018-12-162-5/+5
* academic/sigrok-cli: Updated for version 0.7.1. Andrzej Telszewski2018-12-163-5/+15
* academic/Gridcoin-Research: Updated for version 4.0.1.0. Edward W. Koenig2018-12-152-4/+4
* academic/zotero: Updated for version 5.0.58 + new maintainer. Andrew Payne2018-12-103-14/+15
* academic/qalculate-gtk: Updated for version 2.8.2 Larry Hajali2018-12-092-4/+4