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diff --git a/academic/bwa/README b/academic/bwa/README new file mode 100644 index 0000000000..fe07da7e2d --- /dev/null +++ b/academic/bwa/README @@ -0,0 +1,11 @@ +Burrows-Wheeler Aligner (BWA) is an efficient program that aligns +relatively short nucleotide sequences against a long reference +sequence such as the human genome. It implements two algorithms, bwa- +short and BWA-SW. The former works for query sequences shorter than +200bp and the latter for longer sequences up to around 100kbp. Both +algorithms do gapped alignment. They are usually more accurate and +faster on queries with low error rates. + +If you use BWA-SW, please cite: +Li H. and Durbin R. (2010) Fast and accurate long-read alignment with +Burrows-Wheeler Transform. Bioinformatics, Epub. |