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| author |   Petar Petrov <petar.petrov@student.oulu.fi> | 2015-11-11 23:08:17 +0700 |
|---|---|---|
| committer |   Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2015-11-11 23:08:17 +0700 |
| commit | f5606e21e560095b8c875a75377bf6776a1cbccc (patch) | |
| tree | 76ad6c48c24ec6e164909be10ad3b04c71fae696 /academic/ncbi-blast-plus/ncbi-blast-plus.SlackBuild | |
| parent | 9f78d8c85fd33a04e741b74db17f43a98689e55e (diff) | |
| download | slackbuilds-f5606e21e560095b8c875a75377bf6776a1cbccc.tar.gz slackbuilds-f5606e21e560095b8c875a75377bf6776a1cbccc.tar.xz | |
academic/ncbi-blast-plus: Updated for version 2.2.31.
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/ncbi-blast-plus/ncbi-blast-plus.SlackBuild')
| -rw-r--r-- | academic/ncbi-blast-plus/ncbi-blast-plus.SlackBuild | 19 |
1 files changed, 11 insertions, 8 deletions
diff --git a/academic/ncbi-blast-plus/ncbi-blast-plus.SlackBuild b/academic/ncbi-blast-plus/ncbi-blast-plus.SlackBuild index ee43c76a47..cde0c8bf55 100644 --- a/academic/ncbi-blast-plus/ncbi-blast-plus.SlackBuild +++ b/academic/ncbi-blast-plus/ncbi-blast-plus.SlackBuild @@ -23,12 +23,12 @@ # ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. PRGNAM=ncbi-blast-plus -VERSION=${VERSION:-2.2.30} +VERSION=${VERSION:-2.2.31} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} SRCNAM=ncbi-blast -SRCVER=2.2.30+ +SRCVER=2.2.31+ if [ -z "$ARCH" ]; then case "$( uname -m )" in @@ -45,7 +45,10 @@ OUTPUT=${OUTPUT:-/tmp} set -e -if [ "$ARCH" != "i386" ] && [ "$ARCH" != "x86_64" ]; then +# Check for host architecture. Distribution of 32bit binaries has been +# dropped from NCBI. For more information, please read: +# http://www.ncbi.nlm.nih.gov/mailman/pipermail/blast-announce/2015q2/000112.html +if [ "$ARCH" != "x86_64" ]; then printf "\n\n$ARCH is not supported... \n" exit 1 fi @@ -79,16 +82,16 @@ install -D -m755 blast_formatter $PKG/usr/bin/blast_formatter install -D -m755 blastdb_aliastool $PKG/usr/bin/blastdb_aliastool install -D -m755 blastdbcheck $PKG/usr/bin/blastdbcheck install -D -m755 blastdbcmd $PKG/usr/bin/blastdbcmd -install -D -m755 blastn $PKG/usr/bin/blastn -install -D -m755 blastp $PKG/usr/bin/blastp -install -D -m755 blastx $PKG/usr/bin/blastx +install -D -m755 blastn $PKG/usr/bin/blastn +install -D -m755 blastp $PKG/usr/bin/blastp +install -D -m755 blastx $PKG/usr/bin/blastx install -D -m755 convert2blastmask $PKG/usr/bin/convert2blastmask install -D -m755 deltablast $PKG/usr/bin/deltablast install -D -m755 dustmasker $PKG/usr/bin/dustmasker install -D -m755 legacy_blast.pl $PKG/usr/bin/legacy_blast.pl install -D -m755 makeblastdb $PKG/usr/bin/makeblastdb install -D -m755 makembindex $PKG/usr/bin/makembindex -install -D -m755 makeprofiledb $PKG/usr/bin/makeprofiledb +install -D -m755 makeprofiledb $PKG/usr/bin/makeprofiledb install -D -m755 psiblast $PKG/usr/bin/psiblast install -D -m755 rpsblast $PKG/usr/bin/rpsblast install -D -m755 rpstblastn $PKG/usr/bin/rpstblastn @@ -104,7 +107,7 @@ find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | gr mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION cp -a \ - ChangeLog LICENSE README \ + ChangeLog LICENSE README doc/README.txt \ $PKG/usr/doc/$PRGNAM-$VERSION cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild |