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* academic/pamlX: Rebuild for paml update. Petar Petrov2022-10-152-4/+5
* academic/paml: Updated for version 4.10.5. Petar Petrov2022-10-153-34/+19
* academic/muscle5: Added (MUSCLE 5: Next-generation MUSCLE) Petar Petrov2022-10-156-0/+273
* academic/DRAMSim2: Added (A cycle accurate DRAM simulator) William PC2022-10-154-0/+159
* academic/jalview: Updated for version 2.11.2.4. Petar Petrov2022-10-153-5/+6
* academic/IGV: Updated for version 2.14.1. Petar Petrov2022-10-152-4/+7
* academic/hyphy: Updated for version 2.5.42. Petar Petrov2022-10-152-4/+4
* academic/gelemental: Updated for version 2.0.1. Petar Petrov2022-10-152-7/+10
* academic/bowtie: Updated for version 1.3.1. Petar Petrov2022-10-152-6/+6
* academic/cryptominisat: Updated for version 5.11.3. Alan Aversa2022-10-152-5/+5
* academic/zotero: updated for version 6.0.15 afhpayne2022-10-152-6/+6
* academic/rpy2: Upgrade to version 3.5.5 brobr2022-10-152-4/+4
* academic/samtools: Ugrade to version 1.16.1 brobr2022-10-152-5/+6
* academic/bcftools: Upgrade to version 1.16 brobr2022-10-152-4/+4
* academic/pysam: use shipped htslib-1.15.1 brobr2022-10-151-5/+2
* academic/cdo: Updated for version 2.0.6 ArTourter2022-10-143-9/+19
* academic/openboard: Fix build with newer ffmpeg. Willy Sudiarto Raharjo2022-10-132-1/+509
* academic/scipy3: Update README Isaac Yu2022-10-101-0/+3
* academic/z3: Updated for version 4.11.2. Nick Smallbone2022-10-082-12/+9
* academic/cadabra2: Updated for version 2.4.0.2. Alexander Verbovetsky2022-10-082-4/+4
* academic/fet: Updated for version 6.6.2. R.S.Ananda Murthy2022-10-082-4/+4
* academic/plus42: Updated for version 1.0.11. Juan M. Lasca2022-10-082-4/+4
* academic/maxima: Updated for version 5.46.0. Judah Milgram2022-10-085-19/+45
* academic/openboard: Updated for version 1.6.4. Willy Sudiarto Raharjo2022-10-082-4/+4
* academic/gromacs: Added (gromacs project) William PC2022-10-014-0/+194
* academic/octave: Updated for version 7.2.0 Kyle Guinn2022-09-253-77/+5
* academic/mumsa: Added (A tool to assess MSA quality) Petar Petrov2022-09-255-0/+152
* academic/units: Updated for version 2.22 ArTourter2022-09-102-5/+5
* academic/grace: Update download url. ArTourter2022-09-101-2/+2
* academic/iqtree: Added (Efficient phylogenomic software by ML) Petar Petrov2022-09-095-0/+212
* academic/vCAPS_coevolution: Added (Coevolution Analysis) Petar Petrov2022-09-097-0/+357
* academic/bpp1.9-phyl: Added (Bio++ 1.9 Phyl Library) Petar Petrov2022-09-095-0/+197
* academic/bpp1.9-seq: Added (Bio++ 1.9 Seq Library) Petar Petrov2022-09-094-0/+155
* academic/bpp1.9-numcalc: Added (Bio++ 1.9 NumCalc Library) Petar Petrov2022-09-094-0/+155
* academic/bpp1.9-utils: Added (Bio++ 1.9 Utils Library) Petar Petrov2022-09-094-0/+159
* academic/prank-msa: Added (probabilistic multiple alignment program) Petar Petrov2022-09-084-0/+171
* academic/bppsuite: Added (Bio++ program suite) Petar Petrov2022-09-084-0/+153
* academic/bpp-popgen: Added (Bio++ Population Genetics Library) Petar Petrov2022-09-084-0/+140
* academic/bpp-phyl-omics: Added (Bio++ Phylogenetic Omics Library) Petar Petrov2022-09-084-0/+140
* academic/bpp-seq-omics: Added (Bio++ Sequence Omics Library) Petar Petrov2022-09-084-0/+142
* academic/bpp-phyl: Added (Bio++ Phylogenetic Library) Petar Petrov2022-09-084-0/+140
* academic/bpp-seq: Added (Bio++ Sequence library) Petar Petrov2022-09-084-0/+141
* academic/bpp-core: Added (Bio++ Core Library) Petar Petrov2022-09-085-0/+156
* academic/ugene: Updated for version 44.0. Petar Petrov2022-09-083-22/+43
* academic/mafft: Updated for version 7.505. Petar Petrov2022-09-082-5/+5
* academic/hyphy: Updated for version 2.5.41. Petar Petrov2022-09-082-5/+5
* academic/DendroPy: Updated for version 4.5.1. Petar Petrov2022-09-082-5/+5
* academic/seaview: Updated for version 5.0.5. Petar Petrov2022-09-042-4/+4
* academic/ncbi-blast+: Updated for version 2.13.0. Petar Petrov2022-09-042-4/+10
* academic/PhyML: Updated for version 3.3.20220408. Petar Petrov2022-09-042-35/+39
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