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-rw-r--r--academic/ncbi-rmblastn/ncbi-rmblastn.SlackBuild36
1 files changed, 20 insertions, 16 deletions
diff --git a/academic/ncbi-rmblastn/ncbi-rmblastn.SlackBuild b/academic/ncbi-rmblastn/ncbi-rmblastn.SlackBuild
index b78a2be545..451486417c 100644
--- a/academic/ncbi-rmblastn/ncbi-rmblastn.SlackBuild
+++ b/academic/ncbi-rmblastn/ncbi-rmblastn.SlackBuild
@@ -1,8 +1,8 @@
-#!/bin/sh
+#!/bin/bash
# Slackware build script for ncbi-rmblastn
-# Copyright 2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2018-2021 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -22,20 +22,27 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+cd $(dirname $0) ; CWD=$(pwd)
+
PRGNAM=ncbi-rmblastn
VERSION=${VERSION:-2.2.28}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
+PKGTYPE=${PKGTYPE:-tgz}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i386 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-CWD=$(pwd)
+if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
+ echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
+ exit 0
+fi
+
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
@@ -43,11 +50,11 @@ OUTPUT=${OUTPUT:-/tmp}
set -e
# Determine the binary arch
-if [ "$ARCH" = "x86_64" ]; then
- BINARCH="x64"
-else
- BINARCH="ia32"
-fi
+case "$ARCH" in
+ x86_64) BINARCH="x64" ;;
+ i?86) BINARCH="ia32" ;;
+ *) echo "Unsupported ARCH '$ARCH'"; exit 1 ;;
+esac
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
@@ -58,17 +65,14 @@ cd $PRGNAM-$VERSION
chown -R root:root .
find -L . \
\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
- -o -perm 511 \) -exec chmod 755 {} \; -o \
+ -o -perm 511 \) -exec chmod 755 {} \+ -o \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
- -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
+ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \+
cd bin
-install -D -m755 rmblastn $PKG/usr/bin/rmblastn
+install -s -D -m755 rmblastn $PKG/usr/bin/rmblastn
cd ..
-find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
- | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
-
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
cp -a LICENSE README $PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
@@ -77,4 +81,4 @@ mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
-/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE